Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm23249-201ENSMUST00000083369 161 ntBASIC3.7□□□□□ -1.82
Scaf1Q5U4C3 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
Scaf1Q5U4C3 Gm16171-201ENSMUST00000118004 324 ntBASIC3.69□□□□□ -1.82
Scaf1Q5U4C3 Mir6350-201ENSMUST00000183639 105 ntBASIC3.69□□□□□ -1.82
Scaf1Q5U4C3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.69□□□□□ -1.82
Scaf1Q5U4C3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.69□□□□□ -1.82
Scaf1Q5U4C3 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Scaf1Q5U4C3 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Scaf1Q5U4C3 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.69□□□□□ -1.82
Scaf1Q5U4C3 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Scaf1Q5U4C3 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Scaf1Q5U4C3 Gm45492-201ENSMUST00000211611 288 ntBASIC3.68□□□□□ -1.82
Scaf1Q5U4C3 AC152979.2-201ENSMUST00000219702 3814 ntBASIC3.68□□□□□ -1.82
Scaf1Q5U4C3 Snord61-201ENSMUST00000083176 71 ntBASIC3.68□□□□□ -1.82
Scaf1Q5U4C3 Mir34a-201ENSMUST00000083559 102 ntBASIC3.68□□□□□ -1.82
Scaf1Q5U4C3 Gm25627-201ENSMUST00000084003 153 ntBASIC3.68□□□□□ -1.82
Scaf1Q5U4C3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Scaf1Q5U4C3 Gm24280-201ENSMUST00000104237 134 ntBASIC3.67□□□□□ -1.82
Scaf1Q5U4C3 Mir466k-201ENSMUST00000116774 122 ntBASIC3.67□□□□□ -1.82
Scaf1Q5U4C3 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Scaf1Q5U4C3 Gm24851-201ENSMUST00000158028 103 ntBASIC3.67□□□□□ -1.82
Scaf1Q5U4C3 Gm25364-201ENSMUST00000158851 107 ntBASIC3.67□□□□□ -1.82
Scaf1Q5U4C3 Gm28900-201ENSMUST00000185232 156 ntBASIC3.67□□□□□ -1.82
Scaf1Q5U4C3 Gm22306-201ENSMUST00000082692 107 ntBASIC3.67□□□□□ -1.82
Scaf1Q5U4C3 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Scaf1Q5U4C3 Gm23803-201ENSMUST00000104610 132 ntBASIC3.66□□□□□ -1.82
Scaf1Q5U4C3 Gm28669-201ENSMUST00000188400 100 ntBASIC3.66□□□□□ -1.82
Scaf1Q5U4C3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Scaf1Q5U4C3 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Scaf1Q5U4C3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 Mir1931-201ENSMUST00000158589 119 ntBASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 Gm18665-201ENSMUST00000189783 270 ntBASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 Gm37007-201ENSMUST00000194234 319 ntBASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 Gm44358-201ENSMUST00000196301 98 ntBASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 AC163289.1-201ENSMUST00000215919 262 ntBASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 Snord104-201ENSMUST00000083192 70 ntBASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 Gm22681-201ENSMUST00000083853 106 ntBASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Scaf1Q5U4C3 Gm25882-201ENSMUST00000157784 85 ntBASIC3.64□□□□□ -1.83
Scaf1Q5U4C3 Gm23044-201ENSMUST00000157891 100 ntBASIC3.64□□□□□ -1.83
Scaf1Q5U4C3 Mir7118-201ENSMUST00000197760 61 ntBASIC3.64□□□□□ -1.83
Scaf1Q5U4C3 Gm19855-201ENSMUST00000210145 249 ntBASIC3.64□□□□□ -1.83
Scaf1Q5U4C3 Gm24461-201ENSMUST00000082735 103 ntBASIC3.64□□□□□ -1.83
Scaf1Q5U4C3 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Scaf1Q5U4C3 Mir682-201ENSMUST00000102281 96 ntBASIC3.63□□□□□ -1.83
Scaf1Q5U4C3 Gm14917-201ENSMUST00000118872 2105 ntBASIC3.63□□□□□ -1.83
Scaf1Q5U4C3 Gm25884-201ENSMUST00000157782 62 ntBASIC3.63□□□□□ -1.83
Scaf1Q5U4C3 Gm20718-201ENSMUST00000176058 259 ntBASIC3.63□□□□□ -1.83
Scaf1Q5U4C3 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC3.63□□□□□ -1.83
Scaf1Q5U4C3 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Scaf1Q5U4C3 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Scaf1Q5U4C3 Gm24333-201ENSMUST00000175101 84 ntBASIC3.62□□□□□ -1.83
Scaf1Q5U4C3 Gm25470-201ENSMUST00000175576 111 ntBASIC3.62□□□□□ -1.83
Scaf1Q5U4C3 Gm23567-201ENSMUST00000178005 107 ntBASIC3.62□□□□□ -1.83
Scaf1Q5U4C3 Gm45452-201ENSMUST00000210905 177 ntBASIC3.62□□□□□ -1.83
Scaf1Q5U4C3 Gm24261-201ENSMUST00000083744 104 ntBASIC3.62□□□□□ -1.83
Scaf1Q5U4C3 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Scaf1Q5U4C3 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Scaf1Q5U4C3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Scaf1Q5U4C3 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Scaf1Q5U4C3 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Scaf1Q5U4C3 Gm22387-201ENSMUST00000158191 131 ntBASIC3.61□□□□□ -1.83
Scaf1Q5U4C3 Gm24668-201ENSMUST00000158935 104 ntBASIC3.61□□□□□ -1.83
Scaf1Q5U4C3 Mir7068-201ENSMUST00000183439 74 ntBASIC3.61□□□□□ -1.83
Scaf1Q5U4C3 Trbv7-201ENSMUST00000193339 402 ntBASIC3.61□□□□□ -1.83
Scaf1Q5U4C3 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.61□□□□□ -1.83
Scaf1Q5U4C3 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Scaf1Q5U4C3 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Scaf1Q5U4C3 Mir6388-201ENSMUST00000184417 75 ntBASIC3.6□□□□□ -1.83
Scaf1Q5U4C3 Gm7214-201ENSMUST00000222428 272 ntBASIC3.6□□□□□ -1.83
Scaf1Q5U4C3 Gm25788-201ENSMUST00000082721 131 ntBASIC3.6□□□□□ -1.83
Scaf1Q5U4C3 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.6□□□□□ -1.83
Scaf1Q5U4C3 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Scaf1Q5U4C3 Gm24559-201ENSMUST00000157519 121 ntBASIC3.59□□□□□ -1.83
Scaf1Q5U4C3 Gm44320-201ENSMUST00000199276 86 ntBASIC3.59□□□□□ -1.83
Scaf1Q5U4C3 Gm22622-201ENSMUST00000082870 129 ntBASIC3.59□□□□□ -1.83
Scaf1Q5U4C3 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Scaf1Q5U4C3 Gm25558-201ENSMUST00000158083 106 ntBASIC3.58□□□□□ -1.84
Scaf1Q5U4C3 Gm22163-201ENSMUST00000158408 135 ntBASIC3.58□□□□□ -1.84
Scaf1Q5U4C3 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.58□□□□□ -1.84
Scaf1Q5U4C3 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scaf1Q5U4C3 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Scaf1Q5U4C3 Gm24717-201ENSMUST00000157522 124 ntBASIC3.57□□□□□ -1.84
Scaf1Q5U4C3 Mir3086-201ENSMUST00000175072 87 ntBASIC3.57□□□□□ -1.84
Scaf1Q5U4C3 Gm23370-201ENSMUST00000199545 130 ntBASIC3.57□□□□□ -1.84
Scaf1Q5U4C3 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Scaf1Q5U4C3 Gm8219-201ENSMUST00000218309 242 ntBASIC3.57□□□□□ -1.84
Scaf1Q5U4C3 Gm24705-201ENSMUST00000082808 107 ntBASIC3.57□□□□□ -1.84
Scaf1Q5U4C3 Gm24616-201ENSMUST00000083274 139 ntBASIC3.57□□□□□ -1.84
Scaf1Q5U4C3 Gm25878-201ENSMUST00000104327 93 ntBASIC3.56□□□□□ -1.84
Scaf1Q5U4C3 Gm14937-201ENSMUST00000119709 208 ntBASIC3.56□□□□□ -1.84
Scaf1Q5U4C3 Gm23599-201ENSMUST00000157261 251 ntBASIC3.56□□□□□ -1.84
Scaf1Q5U4C3 Gm24747-201ENSMUST00000157835 87 ntBASIC3.56□□□□□ -1.84
Scaf1Q5U4C3 Gm23898-201ENSMUST00000158111 103 ntBASIC3.56□□□□□ -1.84
Scaf1Q5U4C3 Gm43898-201ENSMUST00000204456 424 ntBASIC3.56□□□□□ -1.84
Scaf1Q5U4C3 AC134601.3-201ENSMUST00000221682 154 ntBASIC3.56□□□□□ -1.84
Scaf1Q5U4C3 Mir127-201ENSMUST00000093568 70 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 140.7 ms