Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm2962-201ENSMUST00000159266 336 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 Gm37693-201ENSMUST00000194562 234 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 Gm6105-201ENSMUST00000200580 624 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 Gm22248-201ENSMUST00000082482 150 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 Gm22980-201ENSMUST00000082608 70 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 Gm25204-201ENSMUST00000082843 106 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 Gm24805-201ENSMUST00000082931 104 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 Mir155-201ENSMUST00000083463 65 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.51□□□□□ -2.17
Trim58Q5NCC9 Gm23836-201ENSMUST00000104434 129 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 Gm11936-201ENSMUST00000118323 160 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 Mir3086-201ENSMUST00000175072 87 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 Gm27711-201ENSMUST00000183802 118 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 Mir6388-201ENSMUST00000184417 75 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 Gm44408-201ENSMUST00000200205 66 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 Gm44563-201ENSMUST00000207958 178 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 AC154390.1-201ENSMUST00000225629 277 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 Gm25141-201ENSMUST00000083177 107 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.5□□□□□ -2.17
Trim58Q5NCC9 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trim58Q5NCC9 Mir223-201ENSMUST00000102112 110 ntBASIC1.49□□□□□ -2.17
Trim58Q5NCC9 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.49□□□□□ -2.17
Trim58Q5NCC9 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.49□□□□□ -2.17
Trim58Q5NCC9 Snord87-201ENSMUST00000175437 87 ntBASIC1.49□□□□□ -2.17
Trim58Q5NCC9 Gm19123-201ENSMUST00000190716 651 ntBASIC1.49□□□□□ -2.17
Trim58Q5NCC9 Mir466e-201ENSMUST00000198862 84 ntBASIC1.49□□□□□ -2.17
Trim58Q5NCC9 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.49□□□□□ -2.17
Trim58Q5NCC9 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.49□□□□□ -2.17
Trim58Q5NCC9 Gm22358-201ENSMUST00000082877 122 ntBASIC1.49□□□□□ -2.17
Trim58Q5NCC9 Gm25188-201ENSMUST00000083913 122 ntBASIC1.49□□□□□ -2.17
Trim58Q5NCC9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Trim58Q5NCC9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Trim58Q5NCC9 Gm25720-201ENSMUST00000157503 105 ntBASIC1.48□□□□□ -2.17
Trim58Q5NCC9 Gm24668-201ENSMUST00000158935 104 ntBASIC1.48□□□□□ -2.17
Trim58Q5NCC9 Gm27402-201ENSMUST00000183890 120 ntBASIC1.48□□□□□ -2.17
Trim58Q5NCC9 Gm28794-201ENSMUST00000185276 136 ntBASIC1.48□□□□□ -2.17
Trim58Q5NCC9 Gm9156-201ENSMUST00000189660 463 ntBASIC1.48□□□□□ -2.17
Trim58Q5NCC9 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Trim58Q5NCC9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.48□□□□□ -2.17
Trim58Q5NCC9 Mir3961-201ENSMUST00000198795 59 ntBASIC1.48□□□□□ -2.17
Trim58Q5NCC9 Gm23370-201ENSMUST00000199545 130 ntBASIC1.48□□□□□ -2.17
Trim58Q5NCC9 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.48□□□□□ -2.17
Trim58Q5NCC9 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Gm23841-201ENSMUST00000116951 114 ntBASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Gm12686-201ENSMUST00000120546 397 ntBASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Gm13560-201ENSMUST00000121865 329 ntBASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Gm22279-201ENSMUST00000157200 93 ntBASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Gm23101-201ENSMUST00000157550 137 ntBASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Gm25371-201ENSMUST00000158162 101 ntBASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Gm26363-201ENSMUST00000158866 83 ntBASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Gm25035-201ENSMUST00000175414 77 ntBASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Snora3-201ENSMUST00000083082 132 ntBASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Gm23100-201ENSMUST00000083455 141 ntBASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trim58Q5NCC9 Gm14937-201ENSMUST00000119709 208 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Gm25914-201ENSMUST00000157618 153 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Gm26089-201ENSMUST00000157898 107 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Gm23542-201ENSMUST00000158208 96 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Gm22768-201ENSMUST00000158366 153 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Gm22433-201ENSMUST00000158550 142 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Gm25718-201ENSMUST00000158632 118 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Gm23047-201ENSMUST00000177661 94 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Mir7683-201ENSMUST00000183842 61 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Gm37586-201ENSMUST00000193654 204 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.46□□□□□ -2.18
Trim58Q5NCC9 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Snord14a-201ENSMUST00000082807 87 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.46□□□□□ -2.18
Trim58Q5NCC9 Gm24595-201ENSMUST00000122501 110 ntBASIC1.45□□□□□ -2.18
Trim58Q5NCC9 Gm23466-201ENSMUST00000157133 106 ntBASIC1.45□□□□□ -2.18
Trim58Q5NCC9 Gm23852-201ENSMUST00000158376 77 ntBASIC1.45□□□□□ -2.18
Trim58Q5NCC9 Gm22075-201ENSMUST00000158599 192 ntBASIC1.45□□□□□ -2.18
Trim58Q5NCC9 Gm26468-201ENSMUST00000158644 106 ntBASIC1.45□□□□□ -2.18
Trim58Q5NCC9 Gm23289-201ENSMUST00000175615 108 ntBASIC1.45□□□□□ -2.18
Trim58Q5NCC9 Gm26426-201ENSMUST00000177866 123 ntBASIC1.45□□□□□ -2.18
Trim58Q5NCC9 Gm26060-201ENSMUST00000180094 123 ntBASIC1.45□□□□□ -2.18
Trim58Q5NCC9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.45□□□□□ -2.18
Trim58Q5NCC9 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.45□□□□□ -2.18
Trim58Q5NCC9 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.45□□□□□ -2.18
Trim58Q5NCC9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.44□□□□□ -2.18
Trim58Q5NCC9 Gm25541-201ENSMUST00000116888 126 ntBASIC1.44□□□□□ -2.18
Trim58Q5NCC9 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.44□□□□□ -2.18
Trim58Q5NCC9 Gm24006-201ENSMUST00000158462 132 ntBASIC1.44□□□□□ -2.18
Trim58Q5NCC9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.44□□□□□ -2.18
Trim58Q5NCC9 Gm25730-201ENSMUST00000178753 165 ntBASIC1.44□□□□□ -2.18
Trim58Q5NCC9 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.44□□□□□ -2.18
Trim58Q5NCC9 Gm37715-201ENSMUST00000193206 235 ntBASIC1.44□□□□□ -2.18
Trim58Q5NCC9 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.44□□□□□ -2.18
Trim58Q5NCC9 Gm25636-201ENSMUST00000082666 133 ntBASIC1.44□□□□□ -2.18
Trim58Q5NCC9 Rny1-201ENSMUST00000083767 112 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 162.2 ms