Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC1.31□□□□□ -2.2
Trim40Q3UWA4 Gm23558-201ENSMUST00000157823 80 ntBASIC1.31□□□□□ -2.2
Trim40Q3UWA4 Gm23665-201ENSMUST00000158054 62 ntBASIC1.31□□□□□ -2.2
Trim40Q3UWA4 Gm25836-201ENSMUST00000158918 123 ntBASIC1.31□□□□□ -2.2
Trim40Q3UWA4 Mir6917-201ENSMUST00000184111 61 ntBASIC1.31□□□□□ -2.2
Trim40Q3UWA4 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.31□□□□□ -2.2
Trim40Q3UWA4 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.31□□□□□ -2.2
Trim40Q3UWA4 Snord14a-201ENSMUST00000082807 87 ntBASIC1.31□□□□□ -2.2
Trim40Q3UWA4 Gm22723-201ENSMUST00000083820 129 ntBASIC1.31□□□□□ -2.2
Trim40Q3UWA4 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Mir881-201ENSMUST00000104844 78 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm11936-201ENSMUST00000118323 160 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm14536-201ENSMUST00000118324 138 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm15027-201ENSMUST00000120922 138 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm25424-201ENSMUST00000157612 58 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm22951-201ENSMUST00000179471 107 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm29613-201ENSMUST00000185846 313 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm29544-201ENSMUST00000188860 313 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm28808-201ENSMUST00000190978 313 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm18433-201ENSMUST00000192747 197 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm44483-201ENSMUST00000197203 97 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm44409-201ENSMUST00000198810 166 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm45150-201ENSMUST00000206051 467 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm45116-201ENSMUST00000207392 275 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm45859-201ENSMUST00000212794 214 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Trim40Q3UWA4 Gm23705-201ENSMUST00000104370 130 ntBASIC1.29□□□□□ -2.2
Trim40Q3UWA4 Gm25423-201ENSMUST00000157609 107 ntBASIC1.29□□□□□ -2.2
Trim40Q3UWA4 Mir3103-201ENSMUST00000175474 67 ntBASIC1.29□□□□□ -2.2
Trim40Q3UWA4 Gm28724-201ENSMUST00000186149 625 ntBASIC1.29□□□□□ -2.2
Trim40Q3UWA4 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.29□□□□□ -2.2
Trim40Q3UWA4 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Trim40Q3UWA4 Mir669g-201ENSMUST00000116809 123 ntBASIC1.28□□□□□ -2.2
Trim40Q3UWA4 Gm16032-201ENSMUST00000118534 168 ntBASIC1.28□□□□□ -2.2
Trim40Q3UWA4 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.28□□□□□ -2.2
Trim40Q3UWA4 Gm26482-201ENSMUST00000158015 62 ntBASIC1.28□□□□□ -2.2
Trim40Q3UWA4 Gm22663-201ENSMUST00000158721 102 ntBASIC1.28□□□□□ -2.2
Trim40Q3UWA4 Traj60-201ENSMUST00000167781 54 ntBASIC1.28□□□□□ -2.2
Trim40Q3UWA4 Gm28409-201ENSMUST00000187064 103 ntBASIC1.28□□□□□ -2.2
Trim40Q3UWA4 Gm44353-201ENSMUST00000200618 138 ntBASIC1.28□□□□□ -2.2
Trim40Q3UWA4 Mir320-201ENSMUST00000083594 82 ntBASIC1.28□□□□□ -2.2
Trim40Q3UWA4 Gm25627-201ENSMUST00000084003 153 ntBASIC1.28□□□□□ -2.2
Trim40Q3UWA4 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
Trim40Q3UWA4 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.28□□□□□ -2.21
Trim40Q3UWA4 Gm23950-201ENSMUST00000104026 129 ntBASIC1.27□□□□□ -2.21
Trim40Q3UWA4 Gm12309-201ENSMUST00000119889 182 ntBASIC1.27□□□□□ -2.21
Trim40Q3UWA4 Gm13801-201ENSMUST00000120750 160 ntBASIC1.27□□□□□ -2.21
Trim40Q3UWA4 Gm25718-201ENSMUST00000158632 118 ntBASIC1.27□□□□□ -2.21
Trim40Q3UWA4 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.27□□□□□ -2.21
Trim40Q3UWA4 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.27□□□□□ -2.21
Trim40Q3UWA4 Gm23245-201ENSMUST00000083370 135 ntBASIC1.27□□□□□ -2.21
Trim40Q3UWA4 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Trim40Q3UWA4 Gm22545-201ENSMUST00000104350 132 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Gm15162-201ENSMUST00000119325 283 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Gm23466-201ENSMUST00000157133 106 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Gm22553-201ENSMUST00000157797 295 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Gm26004-201ENSMUST00000158804 116 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Snora15-201ENSMUST00000177461 131 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Gm23977-201ENSMUST00000177871 74 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Mir6406-201ENSMUST00000183592 120 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Mir7675-201ENSMUST00000184262 58 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Gm43512-201ENSMUST00000198495 176 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Gm45654-201ENSMUST00000210980 123 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 Gm25697-201ENSMUST00000082902 98 ntBASIC1.26□□□□□ -2.21
Trim40Q3UWA4 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Gm24865-201ENSMUST00000103246 96 ntBASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Gm11204-201ENSMUST00000122438 147 ntBASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Gm23230-201ENSMUST00000157298 133 ntBASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Gm24394-201ENSMUST00000158141 123 ntBASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Gm22675-201ENSMUST00000158430 104 ntBASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Gm25653-201ENSMUST00000158473 138 ntBASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Gm37715-201ENSMUST00000193206 235 ntBASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Gm42855-201ENSMUST00000197388 253 ntBASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Gm44989-201ENSMUST00000204749 217 ntBASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.25□□□□□ -2.21
Trim40Q3UWA4 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm26156-201ENSMUST00000116999 123 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm13797-201ENSMUST00000121792 120 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm24594-201ENSMUST00000122502 99 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm25720-201ENSMUST00000157503 105 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm23898-201ENSMUST00000158111 103 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm23113-201ENSMUST00000158477 99 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm22944-201ENSMUST00000158662 133 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm23339-201ENSMUST00000158962 139 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm25958-201ENSMUST00000175114 71 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Mir6375-201ENSMUST00000197176 95 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.24□□□□□ -2.21
Trim40Q3UWA4 mt-Td-201ENSMUST00000082404 70 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm22306-201ENSMUST00000082692 107 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm25038-201ENSMUST00000082928 130 ntBASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
Trim40Q3UWA4 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Mir544-201ENSMUST00000103813 78 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 142.9 ms