Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm24258-201ENSMUST00000083739 133 ntBASIC0.5□□□□□ -2.33
Upf3bQ3ULL6 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Upf3bQ3ULL6 Mir654-201ENSMUST00000104787 84 ntBASIC0.49□□□□□ -2.33
Upf3bQ3ULL6 Gm12770-201ENSMUST00000121734 462 ntBASIC0.49□□□□□ -2.33
Upf3bQ3ULL6 Gm25783-201ENSMUST00000122525 190 ntBASIC0.49□□□□□ -2.33
Upf3bQ3ULL6 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.49□□□□□ -2.33
Upf3bQ3ULL6 Gm22809-201ENSMUST00000082743 156 ntBASIC0.49□□□□□ -2.33
Upf3bQ3ULL6 Gm3867-201ENSMUST00000086108 279 ntBASIC0.49□□□□□ -2.33
Upf3bQ3ULL6 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Upf3bQ3ULL6 Gm25378-201ENSMUST00000104333 129 ntBASIC0.48□□□□□ -2.33
Upf3bQ3ULL6 Gm24555-201ENSMUST00000104548 124 ntBASIC0.48□□□□□ -2.33
Upf3bQ3ULL6 Gm11522-201ENSMUST00000120533 176 ntBASIC0.48□□□□□ -2.33
Upf3bQ3ULL6 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.48□□□□□ -2.33
Upf3bQ3ULL6 Mir1961-201ENSMUST00000158643 112 ntBASIC0.48□□□□□ -2.33
Upf3bQ3ULL6 Gm26285-201ENSMUST00000177923 107 ntBASIC0.48□□□□□ -2.33
Upf3bQ3ULL6 Gm44811-201ENSMUST00000209120 228 ntBASIC0.48□□□□□ -2.33
Upf3bQ3ULL6 Gm45543-201ENSMUST00000209327 88 ntBASIC0.48□□□□□ -2.33
Upf3bQ3ULL6 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.48□□□□□ -2.33
Upf3bQ3ULL6 Gm23622-201ENSMUST00000082460 107 ntBASIC0.48□□□□□ -2.33
Upf3bQ3ULL6 Gm25414-201ENSMUST00000101814 107 ntBASIC0.47□□□□□ -2.33
Upf3bQ3ULL6 Mir767-201ENSMUST00000103256 107 ntBASIC0.47□□□□□ -2.33
Upf3bQ3ULL6 Gm13341-201ENSMUST00000120780 672 ntBASIC0.47□□□□□ -2.33
Upf3bQ3ULL6 Gm25968-201ENSMUST00000157167 100 ntBASIC0.47□□□□□ -2.33
Upf3bQ3ULL6 Gm22215-201ENSMUST00000157558 96 ntBASIC0.47□□□□□ -2.33
Upf3bQ3ULL6 Gm29014-201ENSMUST00000191422 326 ntBASIC0.47□□□□□ -2.33
Upf3bQ3ULL6 Gm44462-201ENSMUST00000199696 129 ntBASIC0.47□□□□□ -2.33
Upf3bQ3ULL6 Gm34783-201ENSMUST00000209159 303 ntBASIC0.47□□□□□ -2.33
Upf3bQ3ULL6 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.46□□□□□ -2.34
Upf3bQ3ULL6 Gm26484-201ENSMUST00000158018 106 ntBASIC0.46□□□□□ -2.34
Upf3bQ3ULL6 Gm25161-201ENSMUST00000158913 132 ntBASIC0.46□□□□□ -2.34
Upf3bQ3ULL6 Gm24818-201ENSMUST00000175093 161 ntBASIC0.46□□□□□ -2.34
Upf3bQ3ULL6 Mir6364-201ENSMUST00000183396 86 ntBASIC0.46□□□□□ -2.34
Upf3bQ3ULL6 Gm44465-201ENSMUST00000199536 114 ntBASIC0.46□□□□□ -2.34
Upf3bQ3ULL6 Gm11798-201ENSMUST00000119150 421 ntBASIC0.45□□□□□ -2.34
Upf3bQ3ULL6 Gm26022-201ENSMUST00000158663 108 ntBASIC0.45□□□□□ -2.34
Upf3bQ3ULL6 Mir3079-201ENSMUST00000175428 90 ntBASIC0.45□□□□□ -2.34
Upf3bQ3ULL6 Gm27289-201ENSMUST00000183341 82 ntBASIC0.45□□□□□ -2.34
Upf3bQ3ULL6 Gm23625-201ENSMUST00000082457 100 ntBASIC0.45□□□□□ -2.34
Upf3bQ3ULL6 Mir324-201ENSMUST00000083600 89 ntBASIC0.45□□□□□ -2.34
Upf3bQ3ULL6 Gm22199-201ENSMUST00000122660 126 ntBASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Gm23672-201ENSMUST00000157471 107 ntBASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Gm22522-201ENSMUST00000158271 151 ntBASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Gm24772-201ENSMUST00000158507 110 ntBASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Gm25949-201ENSMUST00000175333 114 ntBASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Gm27540-201ENSMUST00000184950 187 ntBASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Gm44473-201ENSMUST00000204039 152 ntBASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Mir34a-201ENSMUST00000083559 102 ntBASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Upf3bQ3ULL6 Gm23142-201ENSMUST00000101848 105 ntBASIC0.43□□□□□ -2.34
Upf3bQ3ULL6 Gm26240-201ENSMUST00000101893 105 ntBASIC0.43□□□□□ -2.34
Upf3bQ3ULL6 Gm14536-201ENSMUST00000118324 138 ntBASIC0.43□□□□□ -2.34
Upf3bQ3ULL6 Gm15027-201ENSMUST00000120922 138 ntBASIC0.43□□□□□ -2.34
Upf3bQ3ULL6 Cfap61-214ENSMUST00000167179 183 ntBASIC0.43□□□□□ -2.34
Upf3bQ3ULL6 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.43□□□□□ -2.34
Upf3bQ3ULL6 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.43□□□□□ -2.34
Upf3bQ3ULL6 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.43□□□□□ -2.34
Upf3bQ3ULL6 Gm24035-201ENSMUST00000082867 107 ntBASIC0.43□□□□□ -2.34
Upf3bQ3ULL6 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Upf3bQ3ULL6 Mir880-201ENSMUST00000104809 78 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Gm22340-201ENSMUST00000157717 114 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Mir1951-201ENSMUST00000157981 89 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Mir1931-201ENSMUST00000158589 119 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Gm23182-201ENSMUST00000158688 135 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Gm42988-201ENSMUST00000198116 225 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Gm44948-201ENSMUST00000209050 149 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Gm5023-201ENSMUST00000217442 587 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Gm25930-201ENSMUST00000082785 107 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Gm24042-201ENSMUST00000083114 103 ntBASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Upf3bQ3ULL6 Gm26303-201ENSMUST00000116845 119 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm13560-201ENSMUST00000121865 329 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm24440-201ENSMUST00000157236 63 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm23759-201ENSMUST00000158351 268 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm22200-201ENSMUST00000158614 67 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm24512-201ENSMUST00000174963 65 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm22914-201ENSMUST00000175195 77 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm25633-201ENSMUST00000178565 107 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm23148-201ENSMUST00000180367 107 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm28256-201ENSMUST00000188953 139 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm28559-201ENSMUST00000190532 139 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm23614-201ENSMUST00000082598 107 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm25855-201ENSMUST00000082787 72 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Gm25258-201ENSMUST00000083049 107 ntBASIC0.41□□□□□ -2.34
Upf3bQ3ULL6 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
Upf3bQ3ULL6 Gm12225-201ENSMUST00000117995 298 ntBASIC0.4□□□□□ -2.35
Upf3bQ3ULL6 Gm14884-201ENSMUST00000120456 196 ntBASIC0.4□□□□□ -2.35
Upf3bQ3ULL6 Gm24288-201ENSMUST00000157630 144 ntBASIC0.4□□□□□ -2.35
Upf3bQ3ULL6 Mir7661-201ENSMUST00000197023 61 ntBASIC0.4□□□□□ -2.35
Upf3bQ3ULL6 Gm43884-201ENSMUST00000204251 559 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 165.8 ms