Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm26922-201ENSMUST00000082687 72 ntBASIC1.63□□□□□ -2.15
Ssbp4Q3U4B1 Gm25142-201ENSMUST00000082698 107 ntBASIC1.63□□□□□ -2.15
Ssbp4Q3U4B1 Gm24165-201ENSMUST00000082718 128 ntBASIC1.63□□□□□ -2.15
Ssbp4Q3U4B1 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Gm23670-201ENSMUST00000157469 119 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Gm23043-201ENSMUST00000157890 109 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Gm25223-201ENSMUST00000158200 110 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Gm16162-201ENSMUST00000162296 297 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Mir7678-201ENSMUST00000185076 71 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Mir3569-201ENSMUST00000185080 58 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Gm37997-201ENSMUST00000193515 267 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Gm37579-201ENSMUST00000194291 142 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Gm36189-201ENSMUST00000204113 523 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Snora69-201ENSMUST00000083708 131 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.62□□□□□ -2.15
Ssbp4Q3U4B1 Gm23010-201ENSMUST00000104151 126 ntBASIC1.61□□□□□ -2.15
Ssbp4Q3U4B1 Gm15214-201ENSMUST00000122155 470 ntBASIC1.61□□□□□ -2.15
Ssbp4Q3U4B1 Gm22337-201ENSMUST00000157721 132 ntBASIC1.61□□□□□ -2.15
Ssbp4Q3U4B1 Gm24015-201ENSMUST00000157725 232 ntBASIC1.61□□□□□ -2.15
Ssbp4Q3U4B1 Gm22731-201ENSMUST00000158086 94 ntBASIC1.61□□□□□ -2.15
Ssbp4Q3U4B1 Gm27928-201ENSMUST00000183747 256 ntBASIC1.61□□□□□ -2.15
Ssbp4Q3U4B1 Gm28344-201ENSMUST00000185704 279 ntBASIC1.61□□□□□ -2.15
Ssbp4Q3U4B1 Gm43199-201ENSMUST00000200019 307 ntBASIC1.61□□□□□ -2.15
Ssbp4Q3U4B1 Gm46993-201ENSMUST00000220708 259 ntBASIC1.61□□□□□ -2.15
Ssbp4Q3U4B1 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.61□□□□□ -2.15
Ssbp4Q3U4B1 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Ssbp4Q3U4B1 Snord89-201ENSMUST00000104516 110 ntBASIC1.6□□□□□ -2.15
Ssbp4Q3U4B1 Gm12449-201ENSMUST00000117572 234 ntBASIC1.6□□□□□ -2.15
Ssbp4Q3U4B1 Gm24595-201ENSMUST00000122501 110 ntBASIC1.6□□□□□ -2.15
Ssbp4Q3U4B1 Gm23230-201ENSMUST00000157298 133 ntBASIC1.6□□□□□ -2.15
Ssbp4Q3U4B1 Gm22099-201ENSMUST00000157925 123 ntBASIC1.6□□□□□ -2.15
Ssbp4Q3U4B1 Gm24837-201ENSMUST00000158683 81 ntBASIC1.6□□□□□ -2.15
Ssbp4Q3U4B1 Gm23090-201ENSMUST00000177331 78 ntBASIC1.6□□□□□ -2.15
Ssbp4Q3U4B1 Gm22510-201ENSMUST00000179304 79 ntBASIC1.6□□□□□ -2.15
Ssbp4Q3U4B1 Gm26336-201ENSMUST00000179449 79 ntBASIC1.6□□□□□ -2.15
Ssbp4Q3U4B1 Gm26390-201ENSMUST00000179628 79 ntBASIC1.6□□□□□ -2.15
Ssbp4Q3U4B1 Mir7021-201ENSMUST00000197026 63 ntBASIC1.6□□□□□ -2.15
Ssbp4Q3U4B1 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm24984-201ENSMUST00000104454 133 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm14709-201ENSMUST00000121225 304 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm24632-201ENSMUST00000122770 323 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm25113-201ENSMUST00000157185 143 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm26150-201ENSMUST00000157426 151 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Rnu7-201ENSMUST00000158458 62 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm23209-201ENSMUST00000158667 110 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Mir721-201ENSMUST00000200230 88 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm5002-201ENSMUST00000207145 223 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm19790-201ENSMUST00000214414 251 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm25895-201ENSMUST00000083714 100 ntBASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Ssbp4Q3U4B1 Gm25538-201ENSMUST00000101943 107 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm6025-201ENSMUST00000121517 201 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm13560-201ENSMUST00000121865 329 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm24783-201ENSMUST00000157639 100 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm25371-201ENSMUST00000158162 101 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm22989-201ENSMUST00000158313 86 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Mir6352-201ENSMUST00000184495 116 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm27979-201ENSMUST00000185126 56 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm44491-201ENSMUST00000196794 96 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Mir3961-201ENSMUST00000198795 59 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm44408-201ENSMUST00000200205 66 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm35736-201ENSMUST00000203681 313 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm45754-201ENSMUST00000212380 279 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Mir107-201ENSMUST00000083660 87 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Gm25513-201ENSMUST00000083861 162 ntBASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Ssbp4Q3U4B1 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm24478-201ENSMUST00000157439 158 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm25428-201ENSMUST00000157608 114 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm25267-201ENSMUST00000158522 63 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm26864-201ENSMUST00000181346 156 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm6003-201ENSMUST00000187903 463 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm9156-201ENSMUST00000189660 463 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm38183-201ENSMUST00000193189 205 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Snord118-201ENSMUST00000082965 135 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm24412-201ENSMUST00000083426 109 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Snora33-201ENSMUST00000093556 129 ntBASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Ssbp4Q3U4B1 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Mir873a-201ENSMUST00000104863 77 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Gm23655-201ENSMUST00000122627 105 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Gm25985-201ENSMUST00000122677 107 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 140.7 ms