Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm12815-201ENSMUST00000121737 135 ntBASIC1.75□□□□□ -2.13
NcanP55066 Gm14846-201ENSMUST00000121868 216 ntBASIC1.75□□□□□ -2.13
NcanP55066 Gm22321-201ENSMUST00000157152 104 ntBASIC1.75□□□□□ -2.13
NcanP55066 Gm25664-201ENSMUST00000157697 107 ntBASIC1.75□□□□□ -2.13
NcanP55066 Gm22338-201ENSMUST00000157715 129 ntBASIC1.75□□□□□ -2.13
NcanP55066 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
NcanP55066 Gm7958-201ENSMUST00000178255 468 ntBASIC1.75□□□□□ -2.13
NcanP55066 Gm7950-201ENSMUST00000179633 468 ntBASIC1.75□□□□□ -2.13
NcanP55066 Mir6995-201ENSMUST00000183658 71 ntBASIC1.75□□□□□ -2.13
NcanP55066 Gm28383-201ENSMUST00000187563 139 ntBASIC1.75□□□□□ -2.13
NcanP55066 Gm29262-201ENSMUST00000190084 196 ntBASIC1.75□□□□□ -2.13
NcanP55066 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.75□□□□□ -2.13
NcanP55066 Gm43865-201ENSMUST00000204721 127 ntBASIC1.75□□□□□ -2.13
NcanP55066 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.75□□□□□ -2.13
NcanP55066 Gm25410-201ENSMUST00000083758 137 ntBASIC1.75□□□□□ -2.13
NcanP55066 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.75□□□□□ -2.13
NcanP55066 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
NcanP55066 Mir3096-201ENSMUST00000116685 71 ntBASIC1.74□□□□□ -2.13
NcanP55066 Gm23258-201ENSMUST00000158319 106 ntBASIC1.74□□□□□ -2.13
NcanP55066 Gm25749-201ENSMUST00000175485 111 ntBASIC1.74□□□□□ -2.13
NcanP55066 Gm20630-201ENSMUST00000177387 551 ntBASIC1.74□□□□□ -2.13
NcanP55066 Gm22510-201ENSMUST00000179304 79 ntBASIC1.74□□□□□ -2.13
NcanP55066 Gm26336-201ENSMUST00000179449 79 ntBASIC1.74□□□□□ -2.13
NcanP55066 Gm26390-201ENSMUST00000179628 79 ntBASIC1.74□□□□□ -2.13
NcanP55066 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.74□□□□□ -2.13
NcanP55066 Mir6540-201ENSMUST00000184886 108 ntBASIC1.74□□□□□ -2.13
NcanP55066 Gm37715-201ENSMUST00000193206 235 ntBASIC1.74□□□□□ -2.13
NcanP55066 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NcanP55066 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
NcanP55066 Gm23705-201ENSMUST00000104370 130 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm15281-201ENSMUST00000125181 351 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm24392-201ENSMUST00000158136 103 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm25166-201ENSMUST00000158909 111 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm24667-201ENSMUST00000158938 103 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm17052-201ENSMUST00000165496 289 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm24333-201ENSMUST00000175101 84 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm23090-201ENSMUST00000177331 78 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm22450-201ENSMUST00000179641 107 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm25473-201ENSMUST00000180191 107 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm28453-203ENSMUST00000187041 189 ntBASIC1.73□□□□□ -2.13
NcanP55066 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm28992-201ENSMUST00000190534 139 ntBASIC1.73□□□□□ -2.13
NcanP55066 Snord43-201ENSMUST00000199549 108 ntBASIC1.73□□□□□ -2.13
NcanP55066 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.73□□□□□ -2.13
NcanP55066 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.73□□□□□ -2.13
NcanP55066 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.73□□□□□ -2.13
NcanP55066 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm24151-201ENSMUST00000082758 141 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm24856-201ENSMUST00000082809 107 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm24042-201ENSMUST00000083114 103 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm26071-201ENSMUST00000083261 107 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm24521-201ENSMUST00000083958 107 ntBASIC1.73□□□□□ -2.13
NcanP55066 Gm22780-201ENSMUST00000104084 132 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm22784-201ENSMUST00000104088 132 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm23841-201ENSMUST00000116951 114 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm12797-201ENSMUST00000118645 273 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm15067-201ENSMUST00000119534 156 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm15692-201ENSMUST00000152173 352 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm22883-201ENSMUST00000157376 106 ntBASIC1.72□□□□□ -2.13
NcanP55066 U6.1-201ENSMUST00000157443 101 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm25371-201ENSMUST00000158162 101 ntBASIC1.72□□□□□ -2.13
NcanP55066 Rnu7-201ENSMUST00000158458 62 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm23636-201ENSMUST00000175070 95 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm25615-201ENSMUST00000177836 94 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm25235-201ENSMUST00000179933 107 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm27493-201ENSMUST00000184128 78 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm9156-201ENSMUST00000189660 463 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm10092-201ENSMUST00000077110 180 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm26495-201ENSMUST00000083152 137 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm26493-201ENSMUST00000083155 136 ntBASIC1.72□□□□□ -2.13
NcanP55066 Mir107-201ENSMUST00000083660 87 ntBASIC1.72□□□□□ -2.13
NcanP55066 Gm23039-201ENSMUST00000083870 161 ntBASIC1.72□□□□□ -2.13
NcanP55066 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
NcanP55066 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
NcanP55066 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
NcanP55066 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
NcanP55066 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
NcanP55066 Gm14922-201ENSMUST00000121131 163 ntBASIC1.71□□□□□ -2.14
NcanP55066 Gm24783-201ENSMUST00000157639 100 ntBASIC1.71□□□□□ -2.14
NcanP55066 Gm23122-201ENSMUST00000157645 103 ntBASIC1.71□□□□□ -2.14
NcanP55066 Gm25658-201ENSMUST00000158472 128 ntBASIC1.71□□□□□ -2.14
NcanP55066 Gm2962-201ENSMUST00000159266 336 ntBASIC1.71□□□□□ -2.14
NcanP55066 Mir3086-201ENSMUST00000175072 87 ntBASIC1.71□□□□□ -2.14
NcanP55066 Gm25024-201ENSMUST00000179667 104 ntBASIC1.71□□□□□ -2.14
NcanP55066 Gm29603-201ENSMUST00000186792 334 ntBASIC1.71□□□□□ -2.14
NcanP55066 Gm29022-201ENSMUST00000190702 225 ntBASIC1.71□□□□□ -2.14
NcanP55066 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.71□□□□□ -2.14
NcanP55066 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.71□□□□□ -2.14
NcanP55066 Gm45907-201ENSMUST00000213023 193 ntBASIC1.71□□□□□ -2.14
NcanP55066 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.71□□□□□ -2.14
NcanP55066 Gm11351-202ENSMUST00000225724 478 ntBASIC1.71□□□□□ -2.14
NcanP55066 Gm24966-201ENSMUST00000082443 79 ntBASIC1.71□□□□□ -2.14
NcanP55066 Mir429-201ENSMUST00000083493 83 ntBASIC1.71□□□□□ -2.14
NcanP55066 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.71□□□□□ -2.14
NcanP55066 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NcanP55066 Gm22935-201ENSMUST00000103960 104 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm23836-201ENSMUST00000104434 129 ntBASIC1.7□□□□□ -2.14
NcanP55066 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.7□□□□□ -2.14
NcanP55066 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 167.3 ms