Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm11792-201ENSMUST00000120640 168 ntBASIC1.38□□□□□ -2.19
Traf1P39428 Gm25825-201ENSMUST00000157091 124 ntBASIC1.38□□□□□ -2.19
Traf1P39428 Gm22129-201ENSMUST00000179034 107 ntBASIC1.38□□□□□ -2.19
Traf1P39428 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Traf1P39428 Gm42855-201ENSMUST00000197388 253 ntBASIC1.38□□□□□ -2.19
Traf1P39428 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.38□□□□□ -2.19
Traf1P39428 Gm25079-201ENSMUST00000082529 203 ntBASIC1.38□□□□□ -2.19
Traf1P39428 Gm25697-201ENSMUST00000082902 98 ntBASIC1.38□□□□□ -2.19
Traf1P39428 Mir211-201ENSMUST00000083651 106 ntBASIC1.38□□□□□ -2.19
Traf1P39428 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Traf1P39428 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Traf1P39428 Gm26074-201ENSMUST00000104063 129 ntBASIC1.37□□□□□ -2.19
Traf1P39428 Gm15379-201ENSMUST00000121224 648 ntBASIC1.37□□□□□ -2.19
Traf1P39428 Gm22485-201ENSMUST00000157990 109 ntBASIC1.37□□□□□ -2.19
Traf1P39428 Gm23182-201ENSMUST00000158688 135 ntBASIC1.37□□□□□ -2.19
Traf1P39428 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.37□□□□□ -2.19
Traf1P39428 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.37□□□□□ -2.19
Traf1P39428 Gm23299-201ENSMUST00000082708 79 ntBASIC1.37□□□□□ -2.19
Traf1P39428 Gm24588-201ENSMUST00000116696 83 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Gm11794-201ENSMUST00000119446 237 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Mir1904-201ENSMUST00000122702 80 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Gm22321-201ENSMUST00000157152 104 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Gm23328-201ENSMUST00000157418 132 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Gm23106-201ENSMUST00000157554 101 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Mir1967-201ENSMUST00000157789 82 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Gm22074-201ENSMUST00000158595 113 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Gm25750-201ENSMUST00000175483 112 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Gm43602-201ENSMUST00000196772 300 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Gm45005-201ENSMUST00000206640 157 ntBASIC1.36□□□□□ -2.19
Traf1P39428 AC154747.1-201ENSMUST00000225265 239 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.36□□□□□ -2.19
Traf1P39428 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.35□□□□□ -2.19
Traf1P39428 Gm25069-201ENSMUST00000175238 86 ntBASIC1.35□□□□□ -2.19
Traf1P39428 Gm28008-201ENSMUST00000184021 186 ntBASIC1.35□□□□□ -2.19
Traf1P39428 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.35□□□□□ -2.19
Traf1P39428 Gm22980-201ENSMUST00000082608 70 ntBASIC1.35□□□□□ -2.19
Traf1P39428 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Traf1P39428 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Traf1P39428 Gm16032-201ENSMUST00000118534 168 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Gm13725-201ENSMUST00000122139 207 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Gm24595-201ENSMUST00000122501 110 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Gm27723-201ENSMUST00000157398 63 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Gm23760-201ENSMUST00000158350 116 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Gm25768-201ENSMUST00000158570 98 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Mir1954-201ENSMUST00000175595 86 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Gm43199-201ENSMUST00000200019 307 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Gm6105-201ENSMUST00000200580 624 ntBASIC1.34□□□□□ -2.19
Traf1P39428 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Gm26224-201ENSMUST00000082506 80 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Gm25627-201ENSMUST00000084003 153 ntBASIC1.34□□□□□ -2.19
Traf1P39428 Gm23982-201ENSMUST00000157141 106 ntBASIC1.33□□□□□ -2.2
Traf1P39428 Gm23536-201ENSMUST00000157541 134 ntBASIC1.33□□□□□ -2.2
Traf1P39428 Gm24777-201ENSMUST00000157644 107 ntBASIC1.33□□□□□ -2.2
Traf1P39428 Gm23194-201ENSMUST00000158813 105 ntBASIC1.33□□□□□ -2.2
Traf1P39428 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.33□□□□□ -2.2
Traf1P39428 Gm11334-201ENSMUST00000121969 156 ntBASIC1.32□□□□□ -2.2
Traf1P39428 Gm26363-201ENSMUST00000158866 83 ntBASIC1.32□□□□□ -2.2
Traf1P39428 Gm22802-201ENSMUST00000175621 89 ntBASIC1.32□□□□□ -2.2
Traf1P39428 Gm29022-201ENSMUST00000190702 225 ntBASIC1.32□□□□□ -2.2
Traf1P39428 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.32□□□□□ -2.2
Traf1P39428 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.32□□□□□ -2.2
Traf1P39428 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.32□□□□□ -2.2
Traf1P39428 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.32□□□□□ -2.2
Traf1P39428 Gm25135-201ENSMUST00000082648 143 ntBASIC1.32□□□□□ -2.2
Traf1P39428 Gm22884-201ENSMUST00000083127 140 ntBASIC1.32□□□□□ -2.2
Traf1P39428 Gm26495-201ENSMUST00000083152 137 ntBASIC1.32□□□□□ -2.2
Traf1P39428 Gm23941-201ENSMUST00000101953 107 ntBASIC1.31□□□□□ -2.2
Traf1P39428 Gm13560-201ENSMUST00000121865 329 ntBASIC1.31□□□□□ -2.2
Traf1P39428 Gm22233-201ENSMUST00000157464 114 ntBASIC1.31□□□□□ -2.2
Traf1P39428 Gm23640-201ENSMUST00000157860 104 ntBASIC1.31□□□□□ -2.2
Traf1P39428 Gm25868-201ENSMUST00000158253 114 ntBASIC1.31□□□□□ -2.2
Traf1P39428 Gm17919-201ENSMUST00000173344 312 ntBASIC1.31□□□□□ -2.2
Traf1P39428 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.31□□□□□ -2.2
Traf1P39428 Gm23039-201ENSMUST00000083870 161 ntBASIC1.31□□□□□ -2.2
Traf1P39428 Gm24523-201ENSMUST00000083965 132 ntBASIC1.31□□□□□ -2.2
Traf1P39428 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.3□□□□□ -2.2
Traf1P39428 Gm26301-201ENSMUST00000104813 95 ntBASIC1.3□□□□□ -2.2
Traf1P39428 Gm25318-201ENSMUST00000122554 314 ntBASIC1.3□□□□□ -2.2
Traf1P39428 Gm23101-201ENSMUST00000157550 137 ntBASIC1.3□□□□□ -2.2
Traf1P39428 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Traf1P39428 Gm44468-201ENSMUST00000199516 105 ntBASIC1.3□□□□□ -2.2
Traf1P39428 Mir7227-201ENSMUST00000200408 59 ntBASIC1.3□□□□□ -2.2
Traf1P39428 Mir34a-201ENSMUST00000083559 102 ntBASIC1.3□□□□□ -2.2
Traf1P39428 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Traf1P39428 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Traf1P39428 Gm26479-201ENSMUST00000122620 106 ntBASIC1.29□□□□□ -2.2
Traf1P39428 Gm24379-201ENSMUST00000122695 86 ntBASIC1.29□□□□□ -2.2
Traf1P39428 Gm26089-201ENSMUST00000157898 107 ntBASIC1.29□□□□□ -2.2
Traf1P39428 Gm23898-201ENSMUST00000158111 103 ntBASIC1.29□□□□□ -2.2
Traf1P39428 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.29□□□□□ -2.2
Traf1P39428 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.29□□□□□ -2.2
Traf1P39428 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.29□□□□□ -2.2
Traf1P39428 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.29□□□□□ -2.2
Traf1P39428 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.29□□□□□ -2.2
Traf1P39428 Gm23406-201ENSMUST00000082537 122 ntBASIC1.29□□□□□ -2.2
Traf1P39428 Gm25650-201ENSMUST00000083784 162 ntBASIC1.29□□□□□ -2.2
Traf1P39428 Mir490-201ENSMUST00000093567 84 ntBASIC1.29□□□□□ -2.2
Traf1P39428 Gm12924-201ENSMUST00000121747 318 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 205.1 ms