Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm22322-201ENSMUST00000157151 111 ntBASIC3.05□□□□□ -1.92
RaraP11416 Gm22664-201ENSMUST00000158719 105 ntBASIC3.05□□□□□ -1.92
RaraP11416 Gm27330-201ENSMUST00000184689 132 ntBASIC3.05□□□□□ -1.92
RaraP11416 Gm9712-201ENSMUST00000210842 311 ntBASIC3.05□□□□□ -1.92
RaraP11416 AC098718.1-201ENSMUST00000226166 175 ntBASIC3.05□□□□□ -1.92
RaraP11416 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RaraP11416 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RaraP11416 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.04□□□□□ -1.92
RaraP11416 n-R5s189-201ENSMUST00000122675 114 ntBASIC3.04□□□□□ -1.92
RaraP11416 Gm24443-201ENSMUST00000157242 132 ntBASIC3.04□□□□□ -1.92
RaraP11416 Snord53-201ENSMUST00000175146 78 ntBASIC3.04□□□□□ -1.92
RaraP11416 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.04□□□□□ -1.92
RaraP11416 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
RaraP11416 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RaraP11416 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RaraP11416 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RaraP11416 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
RaraP11416 Gm11414-201ENSMUST00000121795 263 ntBASIC3.03□□□□□ -1.92
RaraP11416 Gm26864-201ENSMUST00000181346 156 ntBASIC3.03□□□□□ -1.92
RaraP11416 Gm28282-201ENSMUST00000186072 186 ntBASIC3.03□□□□□ -1.92
RaraP11416 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.03□□□□□ -1.92
RaraP11416 Gm22683-201ENSMUST00000082854 137 ntBASIC3.03□□□□□ -1.92
RaraP11416 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
RaraP11416 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
RaraP11416 BC022960-201ENSMUST00000119987 1815 ntBASIC3.03□□□□□ -1.93
RaraP11416 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RaraP11416 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.02□□□□□ -1.93
RaraP11416 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RaraP11416 Gm25364-201ENSMUST00000158851 107 ntBASIC3.02□□□□□ -1.93
RaraP11416 Gm22510-201ENSMUST00000179304 79 ntBASIC3.02□□□□□ -1.93
RaraP11416 Gm26336-201ENSMUST00000179449 79 ntBASIC3.02□□□□□ -1.93
RaraP11416 Gm26390-201ENSMUST00000179628 79 ntBASIC3.02□□□□□ -1.93
RaraP11416 Gm37428-201ENSMUST00000193886 137 ntBASIC3.02□□□□□ -1.93
RaraP11416 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.02□□□□□ -1.93
RaraP11416 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.01□□□□□ -1.93
RaraP11416 Gm25022-201ENSMUST00000102205 83 ntBASIC3.01□□□□□ -1.93
RaraP11416 Gm25091-201ENSMUST00000103997 71 ntBASIC3.01□□□□□ -1.93
RaraP11416 Gm24171-201ENSMUST00000104126 131 ntBASIC3.01□□□□□ -1.93
RaraP11416 Gm14946-201ENSMUST00000119859 296 ntBASIC3.01□□□□□ -1.93
RaraP11416 Gm14709-201ENSMUST00000121225 304 ntBASIC3.01□□□□□ -1.93
RaraP11416 Gm12013-201ENSMUST00000121971 155 ntBASIC3.01□□□□□ -1.93
RaraP11416 Gm22079-201ENSMUST00000157592 106 ntBASIC3.01□□□□□ -1.93
RaraP11416 Gm22330-201ENSMUST00000158068 115 ntBASIC3.01□□□□□ -1.93
RaraP11416 Gm22163-201ENSMUST00000158408 135 ntBASIC3.01□□□□□ -1.93
RaraP11416 Gm24681-201ENSMUST00000158760 107 ntBASIC3.01□□□□□ -1.93
RaraP11416 Gm25678-201ENSMUST00000174984 73 ntBASIC3.01□□□□□ -1.93
RaraP11416 Mir467a-6-201ENSMUST00000177790 83 ntBASIC3.01□□□□□ -1.93
RaraP11416 Mir467a-3-201ENSMUST00000178082 83 ntBASIC3.01□□□□□ -1.93
RaraP11416 Mir467a-7-201ENSMUST00000178635 83 ntBASIC3.01□□□□□ -1.93
RaraP11416 Mir467a-10-201ENSMUST00000179320 83 ntBASIC3.01□□□□□ -1.93
RaraP11416 Mir467a-5-201ENSMUST00000179352 83 ntBASIC3.01□□□□□ -1.93
RaraP11416 Mir467a-2-201ENSMUST00000179447 83 ntBASIC3.01□□□□□ -1.93
RaraP11416 Mir467a-9-201ENSMUST00000179752 83 ntBASIC3.01□□□□□ -1.93
RaraP11416 Mir467a-4-201ENSMUST00000179923 83 ntBASIC3.01□□□□□ -1.93
RaraP11416 Mir467a-8-201ENSMUST00000180070 83 ntBASIC3.01□□□□□ -1.93
RaraP11416 Gm44393-201ENSMUST00000197418 138 ntBASIC3.01□□□□□ -1.93
RaraP11416 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
RaraP11416 Gm23911-201ENSMUST00000104596 134 ntBASIC3□□□□□ -1.93
RaraP11416 Gm25544-201ENSMUST00000122676 120 ntBASIC3□□□□□ -1.93
RaraP11416 Gm16355-201ENSMUST00000128606 231 ntBASIC3□□□□□ -1.93
RaraP11416 Gm26150-201ENSMUST00000157426 151 ntBASIC3□□□□□ -1.93
RaraP11416 Gm17117-201ENSMUST00000163665 299 ntBASIC3□□□□□ -1.93
RaraP11416 Mir6405-201ENSMUST00000184584 124 ntBASIC3□□□□□ -1.93
RaraP11416 Gm19257-201ENSMUST00000186121 183 ntBASIC3□□□□□ -1.93
RaraP11416 Gm43217-201ENSMUST00000199513 367 ntBASIC3□□□□□ -1.93
RaraP11416 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3□□□□□ -1.93
RaraP11416 Gm23244-201ENSMUST00000083375 92 ntBASIC3□□□□□ -1.93
RaraP11416 Gm26175-201ENSMUST00000083794 131 ntBASIC3□□□□□ -1.93
RaraP11416 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC3□□□□□ -1.93
RaraP11416 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RaraP11416 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RaraP11416 Gm22651-201ENSMUST00000157872 94 ntBASIC2.99□□□□□ -1.93
RaraP11416 Rnu7-201ENSMUST00000158458 62 ntBASIC2.99□□□□□ -1.93
RaraP11416 Gm26214-201ENSMUST00000158581 107 ntBASIC2.99□□□□□ -1.93
RaraP11416 Gm37330-201ENSMUST00000192606 153 ntBASIC2.99□□□□□ -1.93
RaraP11416 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.99□□□□□ -1.93
RaraP11416 Gm44399-201ENSMUST00000205043 226 ntBASIC2.99□□□□□ -1.93
RaraP11416 Gm44966-201ENSMUST00000208096 157 ntBASIC2.99□□□□□ -1.93
RaraP11416 Gm26458-201ENSMUST00000082832 128 ntBASIC2.99□□□□□ -1.93
RaraP11416 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
RaraP11416 Mir547-201ENSMUST00000102051 78 ntBASIC2.98□□□□□ -1.93
RaraP11416 Gm22939-201ENSMUST00000103958 131 ntBASIC2.98□□□□□ -1.93
RaraP11416 Gm15281-201ENSMUST00000125181 351 ntBASIC2.98□□□□□ -1.93
RaraP11416 Gm25771-201ENSMUST00000158565 144 ntBASIC2.98□□□□□ -1.93
RaraP11416 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.98□□□□□ -1.93
RaraP11416 Gm28669-201ENSMUST00000188400 100 ntBASIC2.98□□□□□ -1.93
RaraP11416 Gm28358-202ENSMUST00000189292 223 ntBASIC2.98□□□□□ -1.93
RaraP11416 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.98□□□□□ -1.93
RaraP11416 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RaraP11416 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RaraP11416 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.98□□□□□ -1.93
RaraP11416 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
RaraP11416 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RaraP11416 Gm22031-201ENSMUST00000116945 126 ntBASIC2.97□□□□□ -1.93
RaraP11416 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.97□□□□□ -1.93
RaraP11416 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.97□□□□□ -1.93
RaraP11416 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.97□□□□□ -1.93
RaraP11416 Gm22950-201ENSMUST00000082776 107 ntBASIC2.97□□□□□ -1.93
RaraP11416 Gm23377-201ENSMUST00000082943 126 ntBASIC2.97□□□□□ -1.93
RaraP11416 Gm24536-201ENSMUST00000083144 107 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 293.7 ms