Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm22279-201ENSMUST00000157200 93 ntBASIC1.84□□□□□ -2.11
Cbx4O55187 Mir6406-201ENSMUST00000183592 120 ntBASIC1.84□□□□□ -2.11
Cbx4O55187 Gm25813-201ENSMUST00000082748 191 ntBASIC1.84□□□□□ -2.11
Cbx4O55187 Gm25402-201ENSMUST00000082966 131 ntBASIC1.84□□□□□ -2.11
Cbx4O55187 Snord47-201ENSMUST00000083034 77 ntBASIC1.84□□□□□ -2.11
Cbx4O55187 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.83□□□□□ -2.12
Cbx4O55187 Gm25090-201ENSMUST00000104000 132 ntBASIC1.83□□□□□ -2.12
Cbx4O55187 Snord72-201ENSMUST00000104549 81 ntBASIC1.83□□□□□ -2.12
Cbx4O55187 Mir293-201ENSMUST00000104841 80 ntBASIC1.83□□□□□ -2.12
Cbx4O55187 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.83□□□□□ -2.12
Cbx4O55187 Mir6995-201ENSMUST00000183658 71 ntBASIC1.83□□□□□ -2.12
Cbx4O55187 Gm38183-201ENSMUST00000193189 205 ntBASIC1.83□□□□□ -2.12
Cbx4O55187 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.83□□□□□ -2.12
Cbx4O55187 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.83□□□□□ -2.12
Cbx4O55187 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.83□□□□□ -2.12
Cbx4O55187 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.83□□□□□ -2.12
Cbx4O55187 Gm23951-201ENSMUST00000104029 132 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Gm23048-201ENSMUST00000157237 129 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Gm23390-201ENSMUST00000157393 106 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Gm23043-201ENSMUST00000157890 109 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Gm24851-201ENSMUST00000158028 103 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Mir669k-201ENSMUST00000177742 127 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Gm25673-201ENSMUST00000179957 127 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Snord43-201ENSMUST00000199549 108 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Gm43199-201ENSMUST00000200019 307 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Gm43865-201ENSMUST00000204721 127 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Gm22683-201ENSMUST00000082854 137 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Cbx4O55187 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.82□□□□□ -2.12
Cbx4O55187 Gm23109-201ENSMUST00000116867 126 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Gm16032-201ENSMUST00000118534 168 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Gm24015-201ENSMUST00000157725 232 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Gm25658-201ENSMUST00000158472 128 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Mir669n-201ENSMUST00000158636 54 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Gm24177-201ENSMUST00000158927 131 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Gm24668-201ENSMUST00000158935 104 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Gm20477-201ENSMUST00000174028 280 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Gm27544-201ENSMUST00000185069 155 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Gm43427-201ENSMUST00000198188 331 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Gm24412-201ENSMUST00000083426 109 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Mir107-201ENSMUST00000083660 87 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Mir151-201ENSMUST00000083678 68 ntBASIC1.81□□□□□ -2.12
Cbx4O55187 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Cbx4O55187 Gm15281-201ENSMUST00000125181 351 ntBASIC1.8□□□□□ -2.12
Cbx4O55187 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.8□□□□□ -2.12
Cbx4O55187 Gm25914-201ENSMUST00000157618 153 ntBASIC1.8□□□□□ -2.12
Cbx4O55187 Gm24750-201ENSMUST00000157843 104 ntBASIC1.8□□□□□ -2.12
Cbx4O55187 Gm27285-201ENSMUST00000183875 127 ntBASIC1.8□□□□□ -2.12
Cbx4O55187 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Cbx4O55187 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC1.8□□□□□ -2.12
Cbx4O55187 Gm43512-201ENSMUST00000198495 176 ntBASIC1.8□□□□□ -2.12
Cbx4O55187 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.8□□□□□ -2.12
Cbx4O55187 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.8□□□□□ -2.12
Cbx4O55187 Gm46993-201ENSMUST00000220708 259 ntBASIC1.8□□□□□ -2.12
Cbx4O55187 Snora33-201ENSMUST00000093556 129 ntBASIC1.8□□□□□ -2.12
Cbx4O55187 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.8□□□□□ -2.12
Cbx4O55187 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cbx4O55187 Gm24907-201ENSMUST00000116932 128 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Gm6025-201ENSMUST00000121517 201 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Gm24783-201ENSMUST00000157639 100 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Gm25267-201ENSMUST00000158522 63 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Gm25994-201ENSMUST00000175392 101 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Mir7017-201ENSMUST00000184894 62 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.79□□□□□ -2.12
Cbx4O55187 Gm29308-201ENSMUST00000188863 315 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Gm28912-201ENSMUST00000189001 234 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Mir7021-201ENSMUST00000197026 63 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Gm23370-201ENSMUST00000199545 130 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Cbx4O55187 Gm18188-201ENSMUST00000219386 478 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Gm22973-201ENSMUST00000083298 191 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Gm24929-201ENSMUST00000083403 139 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.79□□□□□ -2.12
Cbx4O55187 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Cbx4O55187 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Cbx4O55187 Mir758-201ENSMUST00000103260 81 ntBASIC1.78□□□□□ -2.12
Cbx4O55187 Gm14937-201ENSMUST00000119709 208 ntBASIC1.78□□□□□ -2.12
Cbx4O55187 Mir1949-201ENSMUST00000157434 141 ntBASIC1.78□□□□□ -2.12
Cbx4O55187 Mir3086-201ENSMUST00000175072 87 ntBASIC1.78□□□□□ -2.12
Cbx4O55187 Gm24656-201ENSMUST00000177548 132 ntBASIC1.78□□□□□ -2.12
Cbx4O55187 Gm21885-201ENSMUST00000178891 327 ntBASIC1.78□□□□□ -2.12
Cbx4O55187 Mir7678-201ENSMUST00000185076 71 ntBASIC1.78□□□□□ -2.12
Cbx4O55187 Gm36189-201ENSMUST00000204113 523 ntBASIC1.78□□□□□ -2.12
Cbx4O55187 Gm19855-201ENSMUST00000210145 249 ntBASIC1.78□□□□□ -2.12
Cbx4O55187 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.78□□□□□ -2.12
Cbx4O55187 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Cbx4O55187 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.77□□□□□ -2.13
Cbx4O55187 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Cbx4O55187 Gm23988-201ENSMUST00000117034 122 ntBASIC1.77□□□□□ -2.13
Cbx4O55187 Gm14536-201ENSMUST00000118324 138 ntBASIC1.77□□□□□ -2.13
Cbx4O55187 Gm15027-201ENSMUST00000120922 138 ntBASIC1.77□□□□□ -2.13
Cbx4O55187 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.77□□□□□ -2.13
Cbx4O55187 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Cbx4O55187 Gm15692-201ENSMUST00000152173 352 ntBASIC1.77□□□□□ -2.13
Cbx4O55187 Gm25113-201ENSMUST00000157185 143 ntBASIC1.77□□□□□ -2.13
Cbx4O55187 Gm22989-201ENSMUST00000158313 86 ntBASIC1.77□□□□□ -2.13
Cbx4O55187 Mir6379-201ENSMUST00000183392 115 ntBASIC1.77□□□□□ -2.13
Cbx4O55187 Gm37624-201ENSMUST00000193751 219 ntBASIC1.77□□□□□ -2.13
Cbx4O55187 Mir721-201ENSMUST00000200230 88 ntBASIC1.77□□□□□ -2.13
Cbx4O55187 Gm44052-201ENSMUST00000203382 396 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 173.2 ms