Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm25750-201ENSMUST00000175483 112 ntBASIC0.28□□□□□ -2.36
Cacna1bO55017 Mir7j-201ENSMUST00000184427 122 ntBASIC0.28□□□□□ -2.36
Cacna1bO55017 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.28□□□□□ -2.36
Cacna1bO55017 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.28□□□□□ -2.36
Cacna1bO55017 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.28□□□□□ -2.36
Cacna1bO55017 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Cacna1bO55017 Gm26108-201ENSMUST00000083973 191 ntBASIC0.28□□□□□ -2.36
Cacna1bO55017 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.28□□□□□ -2.37
Cacna1bO55017 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.28□□□□□ -2.37
Cacna1bO55017 Gm11856-201ENSMUST00000118712 276 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Gm22607-201ENSMUST00000158291 105 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Gm24618-201ENSMUST00000177718 94 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Gm23953-201ENSMUST00000178214 94 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Gm26332-201ENSMUST00000179813 94 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Gm22863-201ENSMUST00000180265 94 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Gm29022-201ENSMUST00000190702 225 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Snora16a-202ENSMUST00000196061 137 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Gm23097-201ENSMUST00000083448 105 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Gm18588-201ENSMUST00000177308 492 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.27□□□□□ -2.37
Cacna1bO55017 Gm28597-201ENSMUST00000187664 666 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.27□□□□□ -2.37
Cacna1bO55017 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.27□□□□□ -2.37
Cacna1bO55017 Mir695-201ENSMUST00000102261 109 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 Gm22771-201ENSMUST00000104449 91 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 Gm25507-201ENSMUST00000116981 144 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 Gm14269-201ENSMUST00000120455 306 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.26□□□□□ -2.37
Cacna1bO55017 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.26□□□□□ -2.37
Cacna1bO55017 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.26□□□□□ -2.37
Cacna1bO55017 Gm44282-201ENSMUST00000203199 190 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 Gm25703-201ENSMUST00000083123 151 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 Gm24191-201ENSMUST00000157977 122 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.26□□□□□ -2.37
Cacna1bO55017 Mir468-201ENSMUST00000197332 78 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 Gm45704-201ENSMUST00000212582 403 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 Gm23515-201ENSMUST00000082829 107 ntBASIC0.26□□□□□ -2.37
Cacna1bO55017 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm11334-201ENSMUST00000121969 156 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm25102-201ENSMUST00000122479 112 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm22522-201ENSMUST00000158271 151 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm25032-201ENSMUST00000175411 84 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm26116-201ENSMUST00000175600 77 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm28661-201ENSMUST00000188231 681 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm18213-201ENSMUST00000207850 178 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 AC192333.2-201ENSMUST00000224771 196 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm24355-201ENSMUST00000082858 122 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Mir155-201ENSMUST00000083463 65 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm14846-201ENSMUST00000121868 216 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm27957-201ENSMUST00000184054 127 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm6003-201ENSMUST00000187903 463 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm28921-201ENSMUST00000190219 378 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm25789-201ENSMUST00000083294 76 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Mir214-201ENSMUST00000083582 110 ntBASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Cacna1bO55017 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm26338-201ENSMUST00000102372 110 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm13720-201ENSMUST00000120741 196 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm25393-201ENSMUST00000157336 285 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm17148-201ENSMUST00000164702 249 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm23812-201ENSMUST00000175156 84 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm23374-201ENSMUST00000175408 84 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm27755-201ENSMUST00000184623 132 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm44960-201ENSMUST00000207403 141 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm45402-201ENSMUST00000211796 223 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 DQ267101-201ENSMUST00000082562 73 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm23169-201ENSMUST00000157157 112 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm26152-201ENSMUST00000157427 101 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm24393-201ENSMUST00000158135 97 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Mir3079-201ENSMUST00000175428 90 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm22446-201ENSMUST00000180108 104 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm18291-201ENSMUST00000190791 301 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm38208-201ENSMUST00000192476 114 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm24523-201ENSMUST00000083965 132 ntBASIC0.24□□□□□ -2.37
Cacna1bO55017 Gm26135-201ENSMUST00000101993 72 ntBASIC0.23□□□□□ -2.37
Cacna1bO55017 Mir672-201ENSMUST00000102331 100 ntBASIC0.23□□□□□ -2.37
Cacna1bO55017 Gm22656-201ENSMUST00000104199 171 ntBASIC0.23□□□□□ -2.37
Cacna1bO55017 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.23□□□□□ -2.37
Cacna1bO55017 Snord50b-201ENSMUST00000178497 72 ntBASIC0.23□□□□□ -2.37
Cacna1bO55017 Gm42857-201ENSMUST00000200823 339 ntBASIC0.23□□□□□ -2.37
Cacna1bO55017 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 214.3 ms