Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
Sdc4O35988 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.4
Sdc4O35988 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
Sdc4O35988 Gm24833-201ENSMUST00000116775 120 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 Gm15719-201ENSMUST00000120619 635 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
Sdc4O35988 Gm22520-201ENSMUST00000158269 129 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 Gm22200-201ENSMUST00000158614 67 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 Gm23182-201ENSMUST00000158688 135 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 Gm16539-201ENSMUST00000160086 327 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 Gm24799-201ENSMUST00000178431 79 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 Gm28343-201ENSMUST00000185386 112 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 Gm44726-201ENSMUST00000203427 217 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 Gm24042-201ENSMUST00000083114 103 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 Gm24616-201ENSMUST00000083274 139 ntBASIC0.08□□□□□ -2.4
Sdc4O35988 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
Sdc4O35988 Gm25507-201ENSMUST00000116981 144 ntBASIC0.07□□□□□ -2.4
Sdc4O35988 Gm23212-201ENSMUST00000122718 60 ntBASIC0.07□□□□□ -2.4
Sdc4O35988 Gm24015-201ENSMUST00000157725 232 ntBASIC0.07□□□□□ -2.4
Sdc4O35988 Gm26022-201ENSMUST00000158663 108 ntBASIC0.07□□□□□ -2.4
Sdc4O35988 Gm23024-201ENSMUST00000158770 292 ntBASIC0.07□□□□□ -2.4
Sdc4O35988 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.07□□□□□ -2.4
Sdc4O35988 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.07□□□□□ -2.4
Sdc4O35988 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.07□□□□□ -2.4
Sdc4O35988 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.07□□□□□ -2.4
Sdc4O35988 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Sdc4O35988 Gm26164-201ENSMUST00000083793 104 ntBASIC0.07□□□□□ -2.4
Sdc4O35988 Mir880-201ENSMUST00000104809 78 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 Gm12584-201ENSMUST00000117109 1105 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 Gm16032-201ENSMUST00000118534 168 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 Gm23584-201ENSMUST00000157655 129 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 Gm23821-201ENSMUST00000158738 106 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Sdc4O35988 Gm22914-201ENSMUST00000175195 77 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 Gm26180-201ENSMUST00000179942 107 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.06□□□□□ -2.4
Sdc4O35988 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.06□□□□□ -2.4
Sdc4O35988 Gm28506-201ENSMUST00000189937 150 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 Gm25930-201ENSMUST00000082785 107 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 Mir32-201ENSMUST00000083610 70 ntBASIC0.06□□□□□ -2.4
Sdc4O35988 Gm23232-201ENSMUST00000157300 105 ntBASIC0.05□□□□□ -2.4
Sdc4O35988 Gm24901-201ENSMUST00000158125 110 ntBASIC0.05□□□□□ -2.4
Sdc4O35988 Gm23016-201ENSMUST00000158431 62 ntBASIC0.05□□□□□ -2.4
Sdc4O35988 Gm22239-201ENSMUST00000175220 103 ntBASIC0.05□□□□□ -2.4
Sdc4O35988 Mir3108-201ENSMUST00000175500 79 ntBASIC0.05□□□□□ -2.4
Sdc4O35988 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Sdc4O35988 Mir6346-201ENSMUST00000183982 81 ntBASIC0.05□□□□□ -2.4
Sdc4O35988 Gm27957-201ENSMUST00000184054 127 ntBASIC0.05□□□□□ -2.4
Sdc4O35988 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.05□□□□□ -2.4
Sdc4O35988 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.05□□□□□ -2.4
Sdc4O35988 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.05□□□□□ -2.4
Sdc4O35988 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.05□□□□□ -2.4
Sdc4O35988 Gm44063-201ENSMUST00000203307 376 ntBASIC0.05□□□□□ -2.4
Sdc4O35988 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.05□□□□□ -2.4
Sdc4O35988 Gm26135-201ENSMUST00000101993 72 ntBASIC0.04□□□□□ -2.4
Sdc4O35988 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Sdc4O35988 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Sdc4O35988 Gm26274-201ENSMUST00000157103 321 ntBASIC0.04□□□□□ -2.4
Sdc4O35988 Gm23853-201ENSMUST00000158375 104 ntBASIC0.04□□□□□ -2.4
Sdc4O35988 Mir1931-201ENSMUST00000158589 119 ntBASIC0.04□□□□□ -2.4
Sdc4O35988 Gm25838-201ENSMUST00000158920 120 ntBASIC0.04□□□□□ -2.4
Sdc4O35988 Gm25952-201ENSMUST00000175329 74 ntBASIC0.04□□□□□ -2.4
Sdc4O35988 Snord50b-201ENSMUST00000178497 72 ntBASIC0.04□□□□□ -2.4
Sdc4O35988 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.04□□□□□ -2.4
Sdc4O35988 Gm43944-201ENSMUST00000205220 120 ntBASIC0.04□□□□□ -2.4
Sdc4O35988 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.04□□□□□ -2.4
Sdc4O35988 Mir34a-201ENSMUST00000083559 102 ntBASIC0.04□□□□□ -2.4
Sdc4O35988 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
Sdc4O35988 Gm23013-201ENSMUST00000104146 106 ntBASIC0.03□□□□□ -2.4
Sdc4O35988 Gm14491-201ENSMUST00000121919 199 ntBASIC0.03□□□□□ -2.4
Sdc4O35988 Gm14413-201ENSMUST00000122158 408 ntBASIC0.03□□□□□ -2.4
Sdc4O35988 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.03□□□□□ -2.4
Sdc4O35988 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.03□□□□□ -2.4
Sdc4O35988 Gm22215-201ENSMUST00000157558 96 ntBASIC0.03□□□□□ -2.4
Sdc4O35988 Gm23994-201ENSMUST00000158059 88 ntBASIC0.03□□□□□ -2.4
Sdc4O35988 Gm22447-201ENSMUST00000158155 92 ntBASIC0.03□□□□□ -2.4
Sdc4O35988 Gm23113-201ENSMUST00000158477 99 ntBASIC0.03□□□□□ -2.4
Sdc4O35988 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Sdc4O35988 Gm18113-201ENSMUST00000220630 303 ntBASIC0.03□□□□□ -2.4
Sdc4O35988 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Sdc4O35988 Gm25579-201ENSMUST00000083407 106 ntBASIC0.03□□□□□ -2.4
Sdc4O35988 Gm25007-201ENSMUST00000083808 133 ntBASIC0.03□□□□□ -2.4
Sdc4O35988 Gm15289-201ENSMUST00000117793 244 ntBASIC0.02□□□□□ -2.41
Sdc4O35988 Gm13560-201ENSMUST00000121865 329 ntBASIC0.02□□□□□ -2.41
Sdc4O35988 Gm23180-201ENSMUST00000158686 125 ntBASIC0.02□□□□□ -2.41
Sdc4O35988 Mir1933-201ENSMUST00000158930 88 ntBASIC0.02□□□□□ -2.41
Sdc4O35988 Gm23416-201ENSMUST00000175520 95 ntBASIC0.02□□□□□ -2.41
Sdc4O35988 Gm11392-201ENSMUST00000181419 710 ntBASIC0.02□□□□□ -2.41
Sdc4O35988 Gm23448-201ENSMUST00000083151 104 ntBASIC0.02□□□□□ -2.41
Sdc4O35988 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
Sdc4O35988 Gm24375-201ENSMUST00000104397 132 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 Gm14287-201ENSMUST00000121060 117 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 Gm24595-201ENSMUST00000122501 110 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 Gm25781-201ENSMUST00000122527 84 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 Mir1951-201ENSMUST00000157981 89 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 Scarna8-201ENSMUST00000158333 131 ntBASIC0.01□□□□□ -2.41
Sdc4O35988 Gm23759-201ENSMUST00000158351 268 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 286.1 ms