Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Mir300-201ENSMUST00000083485 79 ntBASIC1.86□□□□□ -2.11
Pcdh9F8VPK8 Mir429-201ENSMUST00000083493 83 ntBASIC1.86□□□□□ -2.11
Pcdh9F8VPK8 Mir302d-201ENSMUST00000083513 66 ntBASIC1.86□□□□□ -2.11
Pcdh9F8VPK8 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 Gm25113-201ENSMUST00000157185 143 ntBASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 U6.1-201ENSMUST00000157443 101 ntBASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 Gm25914-201ENSMUST00000157618 153 ntBASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 Gm26024-201ENSMUST00000158657 322 ntBASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 Gm16584-201ENSMUST00000159267 189 ntBASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 Mir6997-201ENSMUST00000184313 71 ntBASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 Gm44052-201ENSMUST00000203382 396 ntBASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.85□□□□□ -2.11
Pcdh9F8VPK8 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm23988-201ENSMUST00000117034 122 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm25825-201ENSMUST00000157091 124 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm22768-201ENSMUST00000158366 153 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm22666-201ENSMUST00000158717 164 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm24572-201ENSMUST00000175505 88 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm21885-201ENSMUST00000178891 327 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Mir6995-201ENSMUST00000183658 71 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm27285-201ENSMUST00000183875 127 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm37693-201ENSMUST00000194562 234 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm43199-201ENSMUST00000200019 307 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm5010-201ENSMUST00000213131 260 ntBASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.84□□□□□ -2.11
Pcdh9F8VPK8 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.84□□□□□ -2.12
Pcdh9F8VPK8 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Mir669d-201ENSMUST00000104644 121 ntBASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Gm24683-201ENSMUST00000104840 88 ntBASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Gm22482-201ENSMUST00000122563 359 ntBASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Gm27511-201ENSMUST00000183502 127 ntBASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Mir7678-201ENSMUST00000185076 71 ntBASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Gm6003-201ENSMUST00000187903 463 ntBASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.83□□□□□ -2.12
Pcdh9F8VPK8 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Gm26293-201ENSMUST00000104170 84 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Mir3096-201ENSMUST00000116685 71 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Gm22586-201ENSMUST00000157507 122 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Gm24851-201ENSMUST00000158028 103 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Gm23209-201ENSMUST00000158667 110 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Gm20477-201ENSMUST00000174028 280 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Gm18188-201ENSMUST00000219386 478 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 Gm25895-201ENSMUST00000083714 100 ntBASIC1.82□□□□□ -2.12
Pcdh9F8VPK8 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.81□□□□□ -2.12
Pcdh9F8VPK8 Gm3788-201ENSMUST00000119949 136 ntBASIC1.81□□□□□ -2.12
Pcdh9F8VPK8 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.81□□□□□ -2.12
Pcdh9F8VPK8 Gm5900-201ENSMUST00000179862 375 ntBASIC1.81□□□□□ -2.12
Pcdh9F8VPK8 Gm27722-201ENSMUST00000183908 76 ntBASIC1.81□□□□□ -2.12
Pcdh9F8VPK8 Mir7226-201ENSMUST00000184953 60 ntBASIC1.81□□□□□ -2.12
Pcdh9F8VPK8 Gm21064-202ENSMUST00000190583 278 ntBASIC1.81□□□□□ -2.12
Pcdh9F8VPK8 Gm23370-201ENSMUST00000199545 130 ntBASIC1.81□□□□□ -2.12
Pcdh9F8VPK8 Gm24412-201ENSMUST00000083426 109 ntBASIC1.81□□□□□ -2.12
Pcdh9F8VPK8 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Pcdh9F8VPK8 Gm12449-201ENSMUST00000117572 234 ntBASIC1.8□□□□□ -2.12
Pcdh9F8VPK8 Gm6444-201ENSMUST00000119611 458 ntBASIC1.8□□□□□ -2.12
Pcdh9F8VPK8 Gm22337-201ENSMUST00000157721 132 ntBASIC1.8□□□□□ -2.12
Pcdh9F8VPK8 Gm25884-201ENSMUST00000157782 62 ntBASIC1.8□□□□□ -2.12
Pcdh9F8VPK8 Gm23043-201ENSMUST00000157890 109 ntBASIC1.8□□□□□ -2.12
Pcdh9F8VPK8 Gm23665-201ENSMUST00000158054 62 ntBASIC1.8□□□□□ -2.12
Pcdh9F8VPK8 Gm25223-201ENSMUST00000158200 110 ntBASIC1.8□□□□□ -2.12
Pcdh9F8VPK8 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.8□□□□□ -2.12
Pcdh9F8VPK8 Gm44326-201ENSMUST00000198226 101 ntBASIC1.8□□□□□ -2.12
Pcdh9F8VPK8 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.8□□□□□ -2.12
Pcdh9F8VPK8 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Pcdh9F8VPK8 Gm14536-201ENSMUST00000118324 138 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Gm15027-201ENSMUST00000120922 138 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Gm25267-201ENSMUST00000158522 63 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Gm24634-201ENSMUST00000158672 107 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Gm25994-201ENSMUST00000175392 101 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Gm27699-201ENSMUST00000183553 180 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Snord43-201ENSMUST00000199549 108 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Mir721-201ENSMUST00000200230 88 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Gm25357-201ENSMUST00000082745 72 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Gm22683-201ENSMUST00000082854 137 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Mir151-201ENSMUST00000083678 68 ntBASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Pcdh9F8VPK8 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Pcdh9F8VPK8 Gm25538-201ENSMUST00000101943 107 ntBASIC1.78□□□□□ -2.12
Pcdh9F8VPK8 Gm25985-201ENSMUST00000122677 107 ntBASIC1.78□□□□□ -2.12
Pcdh9F8VPK8 Gm22279-201ENSMUST00000157200 93 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 130.3 ms