Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm23644-201ENSMUST00000157856 77 ntBASIC2.42□□□□□ -2.02
Pcdh1F7BJK1 Gm24082-201ENSMUST00000175175 83 ntBASIC2.42□□□□□ -2.02
Pcdh1F7BJK1 Mir669j-201ENSMUST00000179023 121 ntBASIC2.42□□□□□ -2.02
Pcdh1F7BJK1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.42□□□□□ -2.02
Pcdh1F7BJK1 Gm25588-201ENSMUST00000082501 140 ntBASIC2.42□□□□□ -2.02
Pcdh1F7BJK1 Gm22306-201ENSMUST00000082692 107 ntBASIC2.42□□□□□ -2.02
Pcdh1F7BJK1 Gm25006-201ENSMUST00000083813 107 ntBASIC2.42□□□□□ -2.02
Pcdh1F7BJK1 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm15069-201ENSMUST00000117792 192 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm15068-201ENSMUST00000119796 192 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm24475-201ENSMUST00000157435 143 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm24436-201ENSMUST00000157889 302 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm22731-201ENSMUST00000158086 94 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Mir7242-201ENSMUST00000183710 79 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm27792-201ENSMUST00000184031 115 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm44464-201ENSMUST00000198010 138 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm42807-201ENSMUST00000200141 329 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm42844-201ENSMUST00000200355 112 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm23615-201ENSMUST00000082602 65 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Snora2b-201ENSMUST00000084005 137 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Pcdh1F7BJK1 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Pcdh1F7BJK1 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Gm26074-201ENSMUST00000104063 129 ntBASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Snora36b-201ENSMUST00000104383 132 ntBASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Gm24559-201ENSMUST00000157519 121 ntBASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Gm24358-201ENSMUST00000158424 288 ntBASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Gm22665-201ENSMUST00000158720 275 ntBASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Mir6917-201ENSMUST00000184111 61 ntBASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Gm27786-201ENSMUST00000184337 70 ntBASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Snord118-201ENSMUST00000082965 135 ntBASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Mir29c-201ENSMUST00000083614 88 ntBASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Pcdh1F7BJK1 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Pcdh1F7BJK1 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Pcdh1F7BJK1 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.39□□□□□ -2.03
Pcdh1F7BJK1 Gm24280-201ENSMUST00000104237 134 ntBASIC2.39□□□□□ -2.03
Pcdh1F7BJK1 Gm45386-201ENSMUST00000210194 218 ntBASIC2.39□□□□□ -2.03
Pcdh1F7BJK1 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.39□□□□□ -2.03
Pcdh1F7BJK1 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.39□□□□□ -2.03
Pcdh1F7BJK1 Mir466-201ENSMUST00000093591 73 ntBASIC2.39□□□□□ -2.03
Pcdh1F7BJK1 Mir489-201ENSMUST00000093599 107 ntBASIC2.39□□□□□ -2.03
Pcdh1F7BJK1 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Pcdh1F7BJK1 Gm44489-201ENSMUST00000104619 97 ntBASIC2.38□□□□□ -2.03
Pcdh1F7BJK1 Gm22279-201ENSMUST00000157200 93 ntBASIC2.38□□□□□ -2.03
Pcdh1F7BJK1 Gm25889-201ENSMUST00000157775 107 ntBASIC2.38□□□□□ -2.03
Pcdh1F7BJK1 Gm23223-201ENSMUST00000158119 127 ntBASIC2.38□□□□□ -2.03
Pcdh1F7BJK1 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.38□□□□□ -2.03
Pcdh1F7BJK1 Gm44555-201ENSMUST00000209008 148 ntBASIC2.38□□□□□ -2.03
Pcdh1F7BJK1 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.38□□□□□ -2.03
Pcdh1F7BJK1 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Pcdh1F7BJK1 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm24171-201ENSMUST00000104126 131 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm13588-201ENSMUST00000120026 135 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm25373-201ENSMUST00000158156 115 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm22535-201ENSMUST00000158174 119 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm24842-201ENSMUST00000158681 54 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm25444-201ENSMUST00000158999 113 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm22070-201ENSMUST00000178475 107 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm25646-201ENSMUST00000178527 79 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm27878-201ENSMUST00000184000 106 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Mir7215-201ENSMUST00000200383 51 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Gm25684-201ENSMUST00000083941 107 ntBASIC2.37□□□□□ -2.03
Pcdh1F7BJK1 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Mir293-201ENSMUST00000104841 80 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm14568-201ENSMUST00000119321 294 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm24894-201ENSMUST00000122744 118 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm22558-201ENSMUST00000157326 95 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm26411-201ENSMUST00000157668 107 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm23859-201ENSMUST00000158383 64 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm24879-201ENSMUST00000158386 143 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm22708-201ENSMUST00000158987 103 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm23268-201ENSMUST00000175494 78 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm28669-201ENSMUST00000188400 100 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm9156-201ENSMUST00000189660 463 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm44393-201ENSMUST00000197418 138 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm45522-201ENSMUST00000210784 166 ntBASIC2.36□□□□□ -2.03
Pcdh1F7BJK1 Gm19118-201ENSMUST00000222554 98 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 149.3 ms