Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.85□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.85□□□□□ -2.27
Ighv1-42A0A0A6YY38 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.85□□□□□ -2.27
Ighv1-42A0A0A6YY38 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.85□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.85□□□□□ -2.27
Ighv1-42A0A0A6YY38 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.85□□□□□ -2.27
Ighv1-42A0A0A6YY38 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.85□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm23299-201ENSMUST00000082708 79 ntBASIC0.85□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm23412-201ENSMUST00000083017 107 ntBASIC0.85□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm22884-201ENSMUST00000083127 140 ntBASIC0.85□□□□□ -2.27
Ighv1-42A0A0A6YY38 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.85□□□□□ -2.27
Ighv1-42A0A0A6YY38 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm26022-201ENSMUST00000158663 108 ntBASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 Mir6985-201ENSMUST00000184641 61 ntBASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm29022-201ENSMUST00000190702 225 ntBASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm38109-201ENSMUST00000195386 181 ntBASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm44458-201ENSMUST00000196594 143 ntBASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm43884-201ENSMUST00000204251 559 ntBASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm25683-201ENSMUST00000083940 131 ntBASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 Gm26111-201ENSMUST00000083969 106 ntBASIC0.84□□□□□ -2.27
Ighv1-42A0A0A6YY38 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm23492-201ENSMUST00000116837 115 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm25825-201ENSMUST00000157091 124 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Mir1951-201ENSMUST00000157981 89 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm23542-201ENSMUST00000158208 96 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm27420-201ENSMUST00000183823 79 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm28211-201ENSMUST00000190920 315 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm37845-201ENSMUST00000194977 355 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm10264-201ENSMUST00000220589 429 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm25204-201ENSMUST00000082843 106 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm25697-201ENSMUST00000082902 98 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm24042-201ENSMUST00000083114 103 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm25578-201ENSMUST00000083406 104 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Mir490-201ENSMUST00000093567 84 ntBASIC0.83□□□□□ -2.28
Ighv1-42A0A0A6YY38 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm15002-201ENSMUST00000118406 452 ntBASIC0.82□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm16032-201ENSMUST00000118534 168 ntBASIC0.82□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm24847-201ENSMUST00000158032 108 ntBASIC0.82□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm27587-201ENSMUST00000185116 163 ntBASIC0.82□□□□□ -2.28
Ighv1-42A0A0A6YY38 Mir3535-201ENSMUST00000197651 147 ntBASIC0.82□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.82□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.82□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm25627-201ENSMUST00000084003 153 ntBASIC0.82□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm22425-201ENSMUST00000158532 138 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm24221-201ENSMUST00000158833 313 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm26159-201ENSMUST00000158968 104 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm23186-201ENSMUST00000180078 107 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm27640-201ENSMUST00000184580 147 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Mir6540-201ENSMUST00000184886 108 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm28330-201ENSMUST00000190353 171 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Mir465d-201ENSMUST00000196314 58 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm44063-201ENSMUST00000203307 376 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm44419-201ENSMUST00000203338 229 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm9795-201ENSMUST00000062156 693 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Mir10b-201ENSMUST00000083566 68 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm25650-201ENSMUST00000083784 162 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.81□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm24342-201ENSMUST00000103907 104 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm24629-201ENSMUST00000122762 89 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm23898-201ENSMUST00000158111 103 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm23182-201ENSMUST00000158688 135 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm24737-201ENSMUST00000158861 100 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm37763-201ENSMUST00000193445 120 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm42533-201ENSMUST00000196247 157 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm44358-201ENSMUST00000196301 98 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm44352-201ENSMUST00000196358 110 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm22248-201ENSMUST00000082482 150 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm25851-201ENSMUST00000082794 107 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Rny1-201ENSMUST00000083767 112 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm24523-201ENSMUST00000083965 132 ntBASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Mir466f-3-201ENSMUST00000104788 94 ntBASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm26255-201ENSMUST00000122492 103 ntBASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm23114-201ENSMUST00000158478 117 ntBASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm22802-201ENSMUST00000175621 89 ntBASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm28344-201ENSMUST00000185704 279 ntBASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm28921-201ENSMUST00000190219 378 ntBASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm22743-201ENSMUST00000083445 133 ntBASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Mir344-201ENSMUST00000083634 95 ntBASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm22814-201ENSMUST00000157452 104 ntBASIC0.78□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm23996-201ENSMUST00000158062 131 ntBASIC0.78□□□□□ -2.28
Ighv1-42A0A0A6YY38 Gm27545-201ENSMUST00000184755 202 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 191.6 ms