Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.17□□□□□ -2.06
Copb1Q9JIF7 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Copb1Q9JIF7 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Gm12941-201ENSMUST00000117934 220 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Gm24015-201ENSMUST00000157725 232 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Gm22553-201ENSMUST00000157797 295 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Mir7017-201ENSMUST00000184894 62 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Gm6003-201ENSMUST00000187903 463 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Gm35736-201ENSMUST00000203681 313 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Gm36189-201ENSMUST00000204113 523 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Gm25895-201ENSMUST00000083714 100 ntBASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Copb1Q9JIF7 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
Copb1Q9JIF7 Gm23230-201ENSMUST00000157298 133 ntBASIC2.15□□□□□ -2.07
Copb1Q9JIF7 Gm26345-201ENSMUST00000157534 120 ntBASIC2.15□□□□□ -2.07
Copb1Q9JIF7 Gm22803-201ENSMUST00000158049 283 ntBASIC2.15□□□□□ -2.07
Copb1Q9JIF7 Gm22727-201ENSMUST00000158090 116 ntBASIC2.15□□□□□ -2.07
Copb1Q9JIF7 Gm23548-201ENSMUST00000158963 106 ntBASIC2.15□□□□□ -2.07
Copb1Q9JIF7 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.15□□□□□ -2.07
Copb1Q9JIF7 Mir1a-2-201ENSMUST00000198520 72 ntBASIC2.15□□□□□ -2.07
Copb1Q9JIF7 Gm46993-201ENSMUST00000220708 259 ntBASIC2.15□□□□□ -2.07
Copb1Q9JIF7 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.15□□□□□ -2.07
Copb1Q9JIF7 Gm25402-201ENSMUST00000082966 131 ntBASIC2.15□□□□□ -2.07
Copb1Q9JIF7 Mir222-201ENSMUST00000083537 79 ntBASIC2.15□□□□□ -2.07
Copb1Q9JIF7 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Gm13433-201ENSMUST00000121701 240 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Gm13560-201ENSMUST00000121865 329 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Gm27878-201ENSMUST00000184000 106 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Mir6905-201ENSMUST00000184228 70 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Gm27443-201ENSMUST00000184660 98 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Gm27544-201ENSMUST00000185069 155 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Mir6376-201ENSMUST00000185149 131 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Gm37377-201ENSMUST00000191733 304 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Gm44491-201ENSMUST00000196794 96 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Mir302d-201ENSMUST00000083513 66 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Mir29c-201ENSMUST00000083614 88 ntBASIC2.14□□□□□ -2.07
Copb1Q9JIF7 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Gm24098-201ENSMUST00000102075 109 ntBASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Gm25381-201ENSMUST00000102078 109 ntBASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Gm26150-201ENSMUST00000157426 151 ntBASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Gm24478-201ENSMUST00000157439 158 ntBASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Gm22731-201ENSMUST00000158086 94 ntBASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Gm25491-201ENSMUST00000158733 308 ntBASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Gm16162-201ENSMUST00000162296 297 ntBASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Gm19790-201ENSMUST00000214414 251 ntBASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Gm22866-201ENSMUST00000083947 177 ntBASIC2.13□□□□□ -2.07
Copb1Q9JIF7 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Copb1Q9JIF7 Gm22151-201ENSMUST00000116963 58 ntBASIC2.12□□□□□ -2.07
Copb1Q9JIF7 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.12□□□□□ -2.07
Copb1Q9JIF7 Gm23983-201ENSMUST00000157142 114 ntBASIC2.12□□□□□ -2.07
Copb1Q9JIF7 Gm23090-201ENSMUST00000177331 78 ntBASIC2.12□□□□□ -2.07
Copb1Q9JIF7 Mir6950-201ENSMUST00000184438 73 ntBASIC2.12□□□□□ -2.07
Copb1Q9JIF7 Gm43199-201ENSMUST00000200019 307 ntBASIC2.12□□□□□ -2.07
Copb1Q9JIF7 Gm42807-201ENSMUST00000200141 329 ntBASIC2.12□□□□□ -2.07
Copb1Q9JIF7 Mir721-201ENSMUST00000200230 88 ntBASIC2.12□□□□□ -2.07
Copb1Q9JIF7 Gm45386-201ENSMUST00000210194 218 ntBASIC2.12□□□□□ -2.07
Copb1Q9JIF7 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC2.12□□□□□ -2.07
Copb1Q9JIF7 Gm24595-201ENSMUST00000122501 110 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Gm16328-201ENSMUST00000126985 196 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Gm23670-201ENSMUST00000157469 119 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Gm17528-201ENSMUST00000171026 239 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Gm23813-201ENSMUST00000175153 77 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Mir669k-201ENSMUST00000177742 127 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Gm22510-201ENSMUST00000179304 79 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Gm26336-201ENSMUST00000179449 79 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Gm26390-201ENSMUST00000179628 79 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Gm25673-201ENSMUST00000179957 127 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Gm25513-201ENSMUST00000083861 162 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Copb1Q9JIF7 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm22051-201ENSMUST00000117002 127 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm14748-201ENSMUST00000119819 411 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm23469-201ENSMUST00000157131 104 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm22586-201ENSMUST00000157507 122 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm22338-201ENSMUST00000157715 129 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm23665-201ENSMUST00000158054 62 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm24770-201ENSMUST00000158505 92 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm23194-201ENSMUST00000158813 105 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm43512-201ENSMUST00000198495 176 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm45791-201ENSMUST00000212908 352 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm22704-201ENSMUST00000083027 137 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Gm24536-201ENSMUST00000083144 107 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.1□□□□□ -2.07
Copb1Q9JIF7 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Copb1Q9JIF7 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.09□□□□□ -2.07
Copb1Q9JIF7 Gm24049-201ENSMUST00000102409 100 ntBASIC2.09□□□□□ -2.07
Copb1Q9JIF7 Mir6901-201ENSMUST00000185062 62 ntBASIC2.09□□□□□ -2.07
Copb1Q9JIF7 Gm44408-201ENSMUST00000200205 66 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 190 ms