Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm22723-201ENSMUST00000083820 129 ntBASIC1.61□□□□□ -2.15
Ddx28Q9CWT6 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 Gm26339-201ENSMUST00000102368 99 ntBASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 Gm13560-201ENSMUST00000121865 329 ntBASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 Gm22279-201ENSMUST00000157200 93 ntBASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 Gm23043-201ENSMUST00000157890 109 ntBASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 Gm25333-201ENSMUST00000158035 246 ntBASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 Gm28912-201ENSMUST00000189001 234 ntBASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 Gm29657-201ENSMUST00000189807 342 ntBASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 Gm29022-201ENSMUST00000190702 225 ntBASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 Gm19123-201ENSMUST00000190716 651 ntBASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
Ddx28Q9CWT6 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm23836-201ENSMUST00000104434 129 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm23101-201ENSMUST00000157550 137 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm22675-201ENSMUST00000158430 104 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm24006-201ENSMUST00000158462 132 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Mir669n-201ENSMUST00000158636 54 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm24572-201ENSMUST00000175505 88 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Mir7026-201ENSMUST00000184384 67 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm33866-201ENSMUST00000196911 289 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm19855-201ENSMUST00000210145 249 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm45654-201ENSMUST00000210980 123 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm22683-201ENSMUST00000082854 137 ntBASIC1.59□□□□□ -2.15
Ddx28Q9CWT6 Gm24835-201ENSMUST00000116777 111 ntBASIC1.58□□□□□ -2.16
Ddx28Q9CWT6 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.58□□□□□ -2.16
Ddx28Q9CWT6 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Ddx28Q9CWT6 Gm15214-201ENSMUST00000122155 470 ntBASIC1.58□□□□□ -2.16
Ddx28Q9CWT6 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.58□□□□□ -2.16
Ddx28Q9CWT6 Mir6351-201ENSMUST00000183826 99 ntBASIC1.58□□□□□ -2.16
Ddx28Q9CWT6 Gm44563-201ENSMUST00000207958 178 ntBASIC1.58□□□□□ -2.16
Ddx28Q9CWT6 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Ddx28Q9CWT6 Mir758-201ENSMUST00000103260 81 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Gm23010-201ENSMUST00000104151 126 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Gm15162-201ENSMUST00000119325 283 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Gm25825-201ENSMUST00000157091 124 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Gm23977-201ENSMUST00000177871 74 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Gm26092-201ENSMUST00000179798 97 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Mir6352-201ENSMUST00000184495 116 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Mir6419-201ENSMUST00000184784 113 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Gm26922-201ENSMUST00000082687 72 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Gm23423-201ENSMUST00000082782 106 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Gm24038-201ENSMUST00000082872 159 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Gm24805-201ENSMUST00000082931 104 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.57□□□□□ -2.16
Ddx28Q9CWT6 Mir881-201ENSMUST00000104844 78 ntBASIC1.56□□□□□ -2.16
Ddx28Q9CWT6 Gm23670-201ENSMUST00000157469 119 ntBASIC1.56□□□□□ -2.16
Ddx28Q9CWT6 Gm23194-201ENSMUST00000158813 105 ntBASIC1.56□□□□□ -2.16
Ddx28Q9CWT6 Gm27517-201ENSMUST00000184347 236 ntBASIC1.56□□□□□ -2.16
Ddx28Q9CWT6 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Ddx28Q9CWT6 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.56□□□□□ -2.16
Ddx28Q9CWT6 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Ddx28Q9CWT6 Gm45859-201ENSMUST00000212794 214 ntBASIC1.56□□□□□ -2.16
Ddx28Q9CWT6 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.56□□□□□ -2.16
Ddx28Q9CWT6 Gm22421-201ENSMUST00000083058 107 ntBASIC1.56□□□□□ -2.16
Ddx28Q9CWT6 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Ddx28Q9CWT6 Gm25992-201ENSMUST00000102437 109 ntBASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Gm14674-201ENSMUST00000117816 342 ntBASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Gm24595-201ENSMUST00000122501 110 ntBASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Gm23665-201ENSMUST00000158054 62 ntBASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Gm26024-201ENSMUST00000158657 322 ntBASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Gm22665-201ENSMUST00000158720 275 ntBASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Mir3057-201ENSMUST00000175040 91 ntBASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Gm28537-201ENSMUST00000189026 315 ntBASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Gm29631-201ENSMUST00000191065 315 ntBASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Gm29014-201ENSMUST00000191422 326 ntBASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Ddx28Q9CWT6 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Gm25315-201ENSMUST00000116823 121 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Gm11204-201ENSMUST00000122438 147 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Gm24385-201ENSMUST00000122694 350 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Gm23048-201ENSMUST00000157237 129 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Gm25184-201ENSMUST00000157753 163 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Gm23208-201ENSMUST00000158666 127 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Gm25035-201ENSMUST00000175414 77 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Gm23571-201ENSMUST00000180073 127 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Mir7679-201ENSMUST00000183379 63 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Gm37579-201ENSMUST00000194291 142 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Gm42719-201ENSMUST00000197393 355 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Mir466e-201ENSMUST00000198862 84 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Rny1-201ENSMUST00000083767 112 ntBASIC1.54□□□□□ -2.16
Ddx28Q9CWT6 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ddx28Q9CWT6 Mir223-201ENSMUST00000102112 110 ntBASIC1.53□□□□□ -2.16
Ddx28Q9CWT6 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ddx28Q9CWT6 Gm23705-201ENSMUST00000104370 130 ntBASIC1.53□□□□□ -2.16
Ddx28Q9CWT6 Gm13801-201ENSMUST00000120750 160 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 175.7 ms