Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.3□□□□□ -2.36
Rpa3Q9CQ71 Gm16032-201ENSMUST00000118534 168 ntBASIC0.29□□□□□ -2.36
Rpa3Q9CQ71 Gm25109-201ENSMUST00000122474 114 ntBASIC0.29□□□□□ -2.36
Rpa3Q9CQ71 Gm25393-201ENSMUST00000157336 285 ntBASIC0.29□□□□□ -2.36
Rpa3Q9CQ71 Gm24487-201ENSMUST00000178017 63 ntBASIC0.29□□□□□ -2.36
Rpa3Q9CQ71 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 Mir654-201ENSMUST00000104787 84 ntBASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 Gm14761-201ENSMUST00000121363 262 ntBASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 Gm24963-201ENSMUST00000157916 144 ntBASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 Gm22447-201ENSMUST00000158155 92 ntBASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 Gm20257-202ENSMUST00000188643 130 ntBASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 Gm29014-201ENSMUST00000191422 326 ntBASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 Gm22685-201ENSMUST00000082848 106 ntBASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 Gm26326-201ENSMUST00000083070 129 ntBASIC0.28□□□□□ -2.36
Rpa3Q9CQ71 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.28□□□□□ -2.37
Rpa3Q9CQ71 Gm22771-201ENSMUST00000104449 91 ntBASIC0.27□□□□□ -2.37
Rpa3Q9CQ71 Gm14946-201ENSMUST00000119859 296 ntBASIC0.27□□□□□ -2.37
Rpa3Q9CQ71 Gm26424-201ENSMUST00000122530 104 ntBASIC0.27□□□□□ -2.37
Rpa3Q9CQ71 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.27□□□□□ -2.37
Rpa3Q9CQ71 Gm25825-201ENSMUST00000157091 124 ntBASIC0.27□□□□□ -2.37
Rpa3Q9CQ71 Gm25434-201ENSMUST00000158278 167 ntBASIC0.27□□□□□ -2.37
Rpa3Q9CQ71 Gm22888-201ENSMUST00000158640 77 ntBASIC0.27□□□□□ -2.37
Rpa3Q9CQ71 Gm25284-201ENSMUST00000180345 141 ntBASIC0.27□□□□□ -2.37
Rpa3Q9CQ71 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.27□□□□□ -2.37
Rpa3Q9CQ71 Gm44948-201ENSMUST00000209050 149 ntBASIC0.27□□□□□ -2.37
Rpa3Q9CQ71 Gm33654-201ENSMUST00000221704 215 ntBASIC0.27□□□□□ -2.37
Rpa3Q9CQ71 Gm22706-201ENSMUST00000157907 112 ntBASIC0.26□□□□□ -2.37
Rpa3Q9CQ71 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Rpa3Q9CQ71 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Rpa3Q9CQ71 Gm44488-201ENSMUST00000199467 119 ntBASIC0.26□□□□□ -2.37
Rpa3Q9CQ71 AC132918.1-201ENSMUST00000227877 925 ntBASIC0.26□□□□□ -2.37
Rpa3Q9CQ71 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.26□□□□□ -2.37
Rpa3Q9CQ71 Rny1-201ENSMUST00000083767 112 ntBASIC0.26□□□□□ -2.37
Rpa3Q9CQ71 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 Gm24342-201ENSMUST00000103907 104 ntBASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 Gm24476-201ENSMUST00000157437 131 ntBASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 Gm23016-201ENSMUST00000158431 62 ntBASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 Gm22945-201ENSMUST00000158557 157 ntBASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 Gm20462-201ENSMUST00000172623 408 ntBASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 Gm25949-201ENSMUST00000175333 114 ntBASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 Gm18113-201ENSMUST00000220630 303 ntBASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 Mir34a-201ENSMUST00000083559 102 ntBASIC0.25□□□□□ -2.37
Rpa3Q9CQ71 Gm26135-201ENSMUST00000101993 72 ntBASIC0.24□□□□□ -2.37
Rpa3Q9CQ71 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Rpa3Q9CQ71 Gm22435-201ENSMUST00000158552 128 ntBASIC0.24□□□□□ -2.37
Rpa3Q9CQ71 Gm22200-201ENSMUST00000158614 67 ntBASIC0.24□□□□□ -2.37
Rpa3Q9CQ71 Gm25838-201ENSMUST00000158920 120 ntBASIC0.24□□□□□ -2.37
Rpa3Q9CQ71 Snord50b-201ENSMUST00000178497 72 ntBASIC0.24□□□□□ -2.37
Rpa3Q9CQ71 Mir6905-201ENSMUST00000184228 70 ntBASIC0.24□□□□□ -2.37
Rpa3Q9CQ71 Gm18185-201ENSMUST00000186725 667 ntBASIC0.24□□□□□ -2.37
Rpa3Q9CQ71 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
Rpa3Q9CQ71 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.24□□□□□ -2.37
Rpa3Q9CQ71 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.24□□□□□ -2.37
Rpa3Q9CQ71 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.23□□□□□ -2.37
Rpa3Q9CQ71 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.23□□□□□ -2.37
Rpa3Q9CQ71 Gm25416-201ENSMUST00000104221 107 ntBASIC0.23□□□□□ -2.37
Rpa3Q9CQ71 Mir880-201ENSMUST00000104809 78 ntBASIC0.23□□□□□ -2.37
Rpa3Q9CQ71 Gm22983-201ENSMUST00000158308 104 ntBASIC0.23□□□□□ -2.37
Rpa3Q9CQ71 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.23□□□□□ -2.37
Rpa3Q9CQ71 Gm30155-201ENSMUST00000223458 339 ntBASIC0.23□□□□□ -2.37
Rpa3Q9CQ71 Gm26164-201ENSMUST00000083793 104 ntBASIC0.23□□□□□ -2.37
Rpa3Q9CQ71 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Rpa3Q9CQ71 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
Rpa3Q9CQ71 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Rpa3Q9CQ71 Gm22786-201ENSMUST00000104086 122 ntBASIC0.22□□□□□ -2.37
Rpa3Q9CQ71 Gm12837-201ENSMUST00000120131 373 ntBASIC0.22□□□□□ -2.37
Rpa3Q9CQ71 Gm22841-201ENSMUST00000158443 62 ntBASIC0.22□□□□□ -2.37
Rpa3Q9CQ71 Gm25314-201ENSMUST00000178810 79 ntBASIC0.22□□□□□ -2.37
Rpa3Q9CQ71 Gm11392-201ENSMUST00000181419 710 ntBASIC0.22□□□□□ -2.37
Rpa3Q9CQ71 Gm29640-201ENSMUST00000187972 278 ntBASIC0.22□□□□□ -2.37
Rpa3Q9CQ71 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.22□□□□□ -2.37
Rpa3Q9CQ71 Gm28256-201ENSMUST00000188953 139 ntBASIC0.22□□□□□ -2.37
Rpa3Q9CQ71 Gm28559-201ENSMUST00000190532 139 ntBASIC0.22□□□□□ -2.37
Rpa3Q9CQ71 Mir500-201ENSMUST00000093600 92 ntBASIC0.22□□□□□ -2.37
Rpa3Q9CQ71 Gm24283-201ENSMUST00000104233 107 ntBASIC0.21□□□□□ -2.38
Rpa3Q9CQ71 Gm11407-201ENSMUST00000120362 1058 ntBASIC0.21□□□□□ -2.38
Rpa3Q9CQ71 Gm14491-201ENSMUST00000121919 199 ntBASIC0.21□□□□□ -2.38
Rpa3Q9CQ71 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Rpa3Q9CQ71 Gm27717-201ENSMUST00000183933 151 ntBASIC0.21□□□□□ -2.38
Rpa3Q9CQ71 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Rpa3Q9CQ71 Gm42988-201ENSMUST00000198116 225 ntBASIC0.21□□□□□ -2.38
Rpa3Q9CQ71 Gm45119-201ENSMUST00000207612 199 ntBASIC0.21□□□□□ -2.38
Rpa3Q9CQ71 AC192616.1-201ENSMUST00000221922 132 ntBASIC0.21□□□□□ -2.38
Rpa3Q9CQ71 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
Rpa3Q9CQ71 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Rpa3Q9CQ71 Mir710-201ENSMUST00000102088 110 ntBASIC0.2□□□□□ -2.38
Rpa3Q9CQ71 Gm11798-201ENSMUST00000119150 421 ntBASIC0.2□□□□□ -2.38
Rpa3Q9CQ71 Gm27919-201ENSMUST00000185163 107 ntBASIC0.2□□□□□ -2.38
Rpa3Q9CQ71 Mir219b-201ENSMUST00000198317 65 ntBASIC0.2□□□□□ -2.38
Rpa3Q9CQ71 Gm44726-201ENSMUST00000203427 217 ntBASIC0.2□□□□□ -2.38
Rpa3Q9CQ71 Gm45543-201ENSMUST00000209327 88 ntBASIC0.2□□□□□ -2.38
Rpa3Q9CQ71 Gm45402-201ENSMUST00000211796 223 ntBASIC0.2□□□□□ -2.38
Rpa3Q9CQ71 Gm23126-201ENSMUST00000104260 134 ntBASIC0.19□□□□□ -2.38
Rpa3Q9CQ71 Gm22149-201ENSMUST00000104442 136 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 189.2 ms