Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.46□□□□□ -2.34
Krt88Q9CPR6 Gm23605-201ENSMUST00000157255 127 ntBASIC0.46□□□□□ -2.34
Krt88Q9CPR6 Gm23898-201ENSMUST00000158111 103 ntBASIC0.46□□□□□ -2.34
Krt88Q9CPR6 Gm22435-201ENSMUST00000158552 128 ntBASIC0.46□□□□□ -2.34
Krt88Q9CPR6 Gm20391-201ENSMUST00000174722 106 ntBASIC0.46□□□□□ -2.34
Krt88Q9CPR6 Gm28597-201ENSMUST00000187664 666 ntBASIC0.46□□□□□ -2.34
Krt88Q9CPR6 Gm28288-201ENSMUST00000191019 214 ntBASIC0.46□□□□□ -2.34
Krt88Q9CPR6 Gm45704-201ENSMUST00000212582 403 ntBASIC0.46□□□□□ -2.34
Krt88Q9CPR6 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Krt88Q9CPR6 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Krt88Q9CPR6 Gm16032-201ENSMUST00000118534 168 ntBASIC0.45□□□□□ -2.34
Krt88Q9CPR6 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.45□□□□□ -2.34
Krt88Q9CPR6 Gm22522-201ENSMUST00000158271 151 ntBASIC0.45□□□□□ -2.34
Krt88Q9CPR6 Gm22163-201ENSMUST00000158408 135 ntBASIC0.45□□□□□ -2.34
Krt88Q9CPR6 Mir1961-201ENSMUST00000158643 112 ntBASIC0.45□□□□□ -2.34
Krt88Q9CPR6 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
Krt88Q9CPR6 Gm20923-201ENSMUST00000190009 319 ntBASIC0.45□□□□□ -2.34
Krt88Q9CPR6 Gm21088-201ENSMUST00000190875 316 ntBASIC0.45□□□□□ -2.34
Krt88Q9CPR6 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.45□□□□□ -2.34
Krt88Q9CPR6 Mir200b-201ENSMUST00000083615 70 ntBASIC0.45□□□□□ -2.34
Krt88Q9CPR6 Gm24258-201ENSMUST00000083739 133 ntBASIC0.45□□□□□ -2.34
Krt88Q9CPR6 Gm14980-201ENSMUST00000121247 736 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Gm25102-201ENSMUST00000122479 112 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Gm26484-201ENSMUST00000158018 106 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Gm25643-201ENSMUST00000158874 103 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Gm29014-201ENSMUST00000191422 326 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Mir468-201ENSMUST00000197332 78 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Mir219b-201ENSMUST00000198317 65 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Gm25579-201ENSMUST00000083407 106 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Gm23097-201ENSMUST00000083448 105 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Mir324-201ENSMUST00000083600 89 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Gm26164-201ENSMUST00000083793 104 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.44□□□□□ -2.34
Krt88Q9CPR6 Gm26135-201ENSMUST00000101993 72 ntBASIC0.43□□□□□ -2.34
Krt88Q9CPR6 Gm22482-201ENSMUST00000122563 359 ntBASIC0.43□□□□□ -2.34
Krt88Q9CPR6 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Krt88Q9CPR6 Gm22945-201ENSMUST00000158557 157 ntBASIC0.43□□□□□ -2.34
Krt88Q9CPR6 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.43□□□□□ -2.34
Krt88Q9CPR6 Mir3079-201ENSMUST00000175428 90 ntBASIC0.43□□□□□ -2.34
Krt88Q9CPR6 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
Krt88Q9CPR6 Snord50b-201ENSMUST00000178497 72 ntBASIC0.43□□□□□ -2.34
Krt88Q9CPR6 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Krt88Q9CPR6 Gm28648-201ENSMUST00000190092 343 ntBASIC0.43□□□□□ -2.34
Krt88Q9CPR6 Gm38060-201ENSMUST00000194822 464 ntBASIC0.43□□□□□ -2.34
Krt88Q9CPR6 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.43□□□□□ -2.34
Krt88Q9CPR6 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
Krt88Q9CPR6 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Krt88Q9CPR6 Gm25416-201ENSMUST00000104221 107 ntBASIC0.42□□□□□ -2.34
Krt88Q9CPR6 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.42□□□□□ -2.34
Krt88Q9CPR6 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC0.42□□□□□ -2.34
Krt88Q9CPR6 Gm26285-201ENSMUST00000177923 107 ntBASIC0.42□□□□□ -2.34
Krt88Q9CPR6 Gm26180-201ENSMUST00000179942 107 ntBASIC0.42□□□□□ -2.34
Krt88Q9CPR6 Gm27289-201ENSMUST00000183341 82 ntBASIC0.42□□□□□ -2.34
Krt88Q9CPR6 Gm29640-201ENSMUST00000187972 278 ntBASIC0.42□□□□□ -2.34
Krt88Q9CPR6 Gm18291-201ENSMUST00000190791 301 ntBASIC0.42□□□□□ -2.34
Krt88Q9CPR6 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0.42□□□□□ -2.34
Krt88Q9CPR6 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.42□□□□□ -2.34
Krt88Q9CPR6 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.42□□□□□ -2.34
Krt88Q9CPR6 Gm23622-201ENSMUST00000082460 107 ntBASIC0.42□□□□□ -2.34
Krt88Q9CPR6 Gm22656-201ENSMUST00000104199 171 ntBASIC0.41□□□□□ -2.34
Krt88Q9CPR6 Mir654-201ENSMUST00000104787 84 ntBASIC0.41□□□□□ -2.34
Krt88Q9CPR6 Gm15899-201ENSMUST00000128586 238 ntBASIC0.41□□□□□ -2.34
Krt88Q9CPR6 Gm25825-201ENSMUST00000157091 124 ntBASIC0.41□□□□□ -2.34
Krt88Q9CPR6 Gm22888-201ENSMUST00000158640 77 ntBASIC0.41□□□□□ -2.34
Krt88Q9CPR6 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.41□□□□□ -2.34
Krt88Q9CPR6 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.41□□□□□ -2.34
Krt88Q9CPR6 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.41□□□□□ -2.34
Krt88Q9CPR6 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.41□□□□□ -2.34
Krt88Q9CPR6 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Krt88Q9CPR6 Mir101a-201ENSMUST00000083517 83 ntBASIC0.41□□□□□ -2.34
Krt88Q9CPR6 Mir34a-201ENSMUST00000083559 102 ntBASIC0.41□□□□□ -2.34
Krt88Q9CPR6 Gm24283-201ENSMUST00000104233 107 ntBASIC0.4□□□□□ -2.35
Krt88Q9CPR6 Gm25968-201ENSMUST00000157167 100 ntBASIC0.4□□□□□ -2.35
Krt88Q9CPR6 Gm24818-201ENSMUST00000175093 161 ntBASIC0.4□□□□□ -2.35
Krt88Q9CPR6 Gm22914-201ENSMUST00000175195 77 ntBASIC0.4□□□□□ -2.35
Krt88Q9CPR6 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Krt88Q9CPR6 Gm44465-201ENSMUST00000199536 114 ntBASIC0.4□□□□□ -2.35
Krt88Q9CPR6 Gm22809-201ENSMUST00000082743 156 ntBASIC0.4□□□□□ -2.35
Krt88Q9CPR6 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.39□□□□□ -2.35
Krt88Q9CPR6 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.39□□□□□ -2.35
Krt88Q9CPR6 Gm14491-201ENSMUST00000121919 199 ntBASIC0.39□□□□□ -2.35
Krt88Q9CPR6 Gm25052-201ENSMUST00000122661 158 ntBASIC0.39□□□□□ -2.35
Krt88Q9CPR6 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.39□□□□□ -2.35
Krt88Q9CPR6 Gm37997-201ENSMUST00000193515 267 ntBASIC0.39□□□□□ -2.35
Krt88Q9CPR6 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.39□□□□□ -2.35
Krt88Q9CPR6 Gm45543-201ENSMUST00000209327 88 ntBASIC0.39□□□□□ -2.35
Krt88Q9CPR6 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.38□□□□□ -2.35
Krt88Q9CPR6 Gm26393-201ENSMUST00000157625 129 ntBASIC0.38□□□□□ -2.35
Krt88Q9CPR6 Gm25044-201ENSMUST00000158603 104 ntBASIC0.38□□□□□ -2.35
Krt88Q9CPR6 Gm25949-201ENSMUST00000175333 114 ntBASIC0.38□□□□□ -2.35
Krt88Q9CPR6 Gm23660-201ENSMUST00000178362 79 ntBASIC0.38□□□□□ -2.35
Krt88Q9CPR6 Gm24088-201ENSMUST00000179100 79 ntBASIC0.38□□□□□ -2.35
Krt88Q9CPR6 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.38□□□□□ -2.35
Krt88Q9CPR6 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.38□□□□□ -2.35
Krt88Q9CPR6 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.38□□□□□ -2.35
Krt88Q9CPR6 Gm38280-201ENSMUST00000192610 158 ntBASIC0.38□□□□□ -2.35
Krt88Q9CPR6 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.38□□□□□ -2.35
Krt88Q9CPR6 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 218.6 ms