Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Snora24-201ENSMUST00000174989 130 ntBASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 Gm19777-201ENSMUST00000191940 358 ntBASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Gm26135-201ENSMUST00000101993 72 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Snord50b-201ENSMUST00000178497 72 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Gm28862-201ENSMUST00000188246 163 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Gm28921-201ENSMUST00000190219 378 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Gm28288-201ENSMUST00000191019 214 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Gm18213-201ENSMUST00000207850 178 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Gm45543-201ENSMUST00000209327 88 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Gm5023-201ENSMUST00000217442 587 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Gm23625-201ENSMUST00000082457 100 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Gm24523-201ENSMUST00000083965 132 ntBASIC0.46□□□□□ -2.34
Ccdc28aQ8CEI3 Gm24271-201ENSMUST00000102327 111 ntBASIC0.45□□□□□ -2.34
Ccdc28aQ8CEI3 Gm23130-201ENSMUST00000104252 74 ntBASIC0.45□□□□□ -2.34
Ccdc28aQ8CEI3 Gm22215-201ENSMUST00000157558 96 ntBASIC0.45□□□□□ -2.34
Ccdc28aQ8CEI3 Gm28435-201ENSMUST00000185496 108 ntBASIC0.45□□□□□ -2.34
Ccdc28aQ8CEI3 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.45□□□□□ -2.34
Ccdc28aQ8CEI3 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.45□□□□□ -2.34
Ccdc28aQ8CEI3 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.45□□□□□ -2.34
Ccdc28aQ8CEI3 Gm25930-201ENSMUST00000082785 107 ntBASIC0.45□□□□□ -2.34
Ccdc28aQ8CEI3 Gm22743-201ENSMUST00000083445 133 ntBASIC0.45□□□□□ -2.34
Ccdc28aQ8CEI3 Gm25627-201ENSMUST00000084003 153 ntBASIC0.45□□□□□ -2.34
Ccdc28aQ8CEI3 Mir767-201ENSMUST00000103256 107 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm11856-201ENSMUST00000118712 276 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm14846-201ENSMUST00000121868 216 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm14491-201ENSMUST00000121919 199 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm25825-201ENSMUST00000157091 124 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm23996-201ENSMUST00000158062 131 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm23022-201ENSMUST00000158768 180 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm24323-201ENSMUST00000175342 77 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm27540-201ENSMUST00000184950 187 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm43432-201ENSMUST00000196352 121 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Mir7661-201ENSMUST00000197023 61 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm43367-201ENSMUST00000199986 625 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm44473-201ENSMUST00000204039 152 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm26056-201ENSMUST00000083043 104 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.44□□□□□ -2.34
Ccdc28aQ8CEI3 Gm22555-201ENSMUST00000157801 62 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 Gm24499-201ENSMUST00000158446 104 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 Gm20391-201ENSMUST00000174722 106 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 Gm24818-201ENSMUST00000175093 161 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 Mir1954-201ENSMUST00000175595 86 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 Gm23148-201ENSMUST00000180367 107 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 Gm22704-201ENSMUST00000083027 137 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 Gm25258-201ENSMUST00000083049 107 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 Mir496a-201ENSMUST00000093627 79 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 Gm26329-201ENSMUST00000093723 110 ntBASIC0.43□□□□□ -2.34
Ccdc28aQ8CEI3 Gm26301-201ENSMUST00000104813 95 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Gm16032-201ENSMUST00000118534 168 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Gm14568-201ENSMUST00000119321 294 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Gm25781-201ENSMUST00000122527 84 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Gm23759-201ENSMUST00000158351 268 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Gm10105-201ENSMUST00000184601 270 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Gm44921-201ENSMUST00000205290 301 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Gm44976-201ENSMUST00000205543 261 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Gm24042-201ENSMUST00000083114 103 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.42□□□□□ -2.34
Ccdc28aQ8CEI3 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm22796-201ENSMUST00000157234 106 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm24440-201ENSMUST00000157236 63 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm24504-201ENSMUST00000157679 100 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm26484-201ENSMUST00000158018 106 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm26022-201ENSMUST00000158663 108 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm23182-201ENSMUST00000158688 135 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm24678-201ENSMUST00000158756 104 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm25643-201ENSMUST00000158874 103 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm24512-201ENSMUST00000174963 65 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Mir15a-201ENSMUST00000175266 84 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm27365-201ENSMUST00000184041 177 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Mir6540-201ENSMUST00000184886 108 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm29014-201ENSMUST00000191422 326 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Gm23851-201ENSMUST00000083831 103 ntBASIC0.41□□□□□ -2.34
Ccdc28aQ8CEI3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm14574-201ENSMUST00000120644 279 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms