Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm26011-201ENSMUST00000104410 104 ntBASIC2.9□□□□□ -1.95
Ubp1Q811S7 Gm14937-201ENSMUST00000119709 208 ntBASIC2.9□□□□□ -1.95
Ubp1Q811S7 Gm24787-201ENSMUST00000157380 123 ntBASIC2.9□□□□□ -1.95
Ubp1Q811S7 Gm24010-201ENSMUST00000157731 282 ntBASIC2.9□□□□□ -1.95
Ubp1Q811S7 Gm26084-201ENSMUST00000157903 104 ntBASIC2.9□□□□□ -1.95
Ubp1Q811S7 Gm22387-201ENSMUST00000158191 131 ntBASIC2.9□□□□□ -1.95
Ubp1Q811S7 Gm22163-201ENSMUST00000158408 135 ntBASIC2.9□□□□□ -1.95
Ubp1Q811S7 Mir6353-201ENSMUST00000183596 113 ntBASIC2.9□□□□□ -1.95
Ubp1Q811S7 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.9□□□□□ -1.95
Ubp1Q811S7 Gm24261-201ENSMUST00000083744 104 ntBASIC2.9□□□□□ -1.95
Ubp1Q811S7 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Ubp1Q811S7 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Ubp1Q811S7 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
Ubp1Q811S7 Gm25878-201ENSMUST00000104327 93 ntBASIC2.89□□□□□ -1.95
Ubp1Q811S7 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Ubp1Q811S7 Gm22322-201ENSMUST00000157151 111 ntBASIC2.89□□□□□ -1.95
Ubp1Q811S7 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.89□□□□□ -1.95
Ubp1Q811S7 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.89□□□□□ -1.95
Ubp1Q811S7 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Ubp1Q811S7 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Ubp1Q811S7 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Ubp1Q811S7 Gm23175-201ENSMUST00000104371 132 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 Gm25490-201ENSMUST00000158734 130 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 Gm24668-201ENSMUST00000158935 104 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 Gm24333-201ENSMUST00000175101 84 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 Mir6388-201ENSMUST00000184417 75 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 Gm29658-201ENSMUST00000185404 230 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 Gm38298-201ENSMUST00000193578 118 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.88□□□□□ -1.95
Ubp1Q811S7 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.87□□□□□ -1.95
Ubp1Q811S7 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Ubp1Q811S7 Gm12412-201ENSMUST00000121867 328 ntBASIC2.87□□□□□ -1.95
Ubp1Q811S7 Gm15281-201ENSMUST00000125181 351 ntBASIC2.87□□□□□ -1.95
Ubp1Q811S7 Gm25558-201ENSMUST00000158083 106 ntBASIC2.87□□□□□ -1.95
Ubp1Q811S7 Mir7039-201ENSMUST00000183852 85 ntBASIC2.87□□□□□ -1.95
Ubp1Q811S7 Gm37796-201ENSMUST00000195327 134 ntBASIC2.87□□□□□ -1.95
Ubp1Q811S7 Gm44464-201ENSMUST00000198010 138 ntBASIC2.87□□□□□ -1.95
Ubp1Q811S7 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.87□□□□□ -1.95
Ubp1Q811S7 Gm25588-201ENSMUST00000082501 140 ntBASIC2.87□□□□□ -1.95
Ubp1Q811S7 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Ubp1Q811S7 Mir542-201ENSMUST00000102186 85 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Gm26074-201ENSMUST00000104063 129 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Gm25168-201ENSMUST00000104189 132 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Gm9009-201ENSMUST00000117321 326 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Gm14502-201ENSMUST00000118154 113 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Gm15067-201ENSMUST00000119534 156 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Gm14671-201ENSMUST00000121790 262 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Gm23898-201ENSMUST00000158111 103 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Gm25066-201ENSMUST00000158145 123 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Mir5123-201ENSMUST00000177794 83 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Gm27379-201ENSMUST00000183730 123 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Gm7214-201ENSMUST00000222428 272 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Gm25409-201ENSMUST00000083764 131 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Snora33-201ENSMUST00000093556 129 ntBASIC2.86□□□□□ -1.95
Ubp1Q811S7 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Ubp1Q811S7 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ubp1Q811S7 Mir499-201ENSMUST00000102357 79 ntBASIC2.85□□□□□ -1.95
Ubp1Q811S7 Gm23325-201ENSMUST00000157422 129 ntBASIC2.85□□□□□ -1.95
Ubp1Q811S7 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.85□□□□□ -1.95
Ubp1Q811S7 Gm23615-201ENSMUST00000082602 65 ntBASIC2.85□□□□□ -1.95
Ubp1Q811S7 Gm23303-201ENSMUST00000082714 152 ntBASIC2.85□□□□□ -1.95
Ubp1Q811S7 Gm25788-201ENSMUST00000082721 131 ntBASIC2.85□□□□□ -1.95
Ubp1Q811S7 Gm23445-201ENSMUST00000082800 107 ntBASIC2.85□□□□□ -1.95
Ubp1Q811S7 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.85□□□□□ -1.95
Ubp1Q811S7 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.85□□□□□ -1.95
Ubp1Q811S7 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
Ubp1Q811S7 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Ubp1Q811S7 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Ubp1Q811S7 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Ubp1Q811S7 Gm14709-201ENSMUST00000121225 304 ntBASIC2.84□□□□□ -1.95
Ubp1Q811S7 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Ubp1Q811S7 Mir3086-201ENSMUST00000175072 87 ntBASIC2.84□□□□□ -1.95
Ubp1Q811S7 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.84□□□□□ -1.95
Ubp1Q811S7 Gm24350-202ENSMUST00000198309 132 ntBASIC2.84□□□□□ -1.95
Ubp1Q811S7 Gm23370-201ENSMUST00000199545 130 ntBASIC2.84□□□□□ -1.95
Ubp1Q811S7 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.84□□□□□ -1.95
Ubp1Q811S7 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.84□□□□□ -1.95
Ubp1Q811S7 Gm25466-201ENSMUST00000103995 132 ntBASIC2.83□□□□□ -1.96
Ubp1Q811S7 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.83□□□□□ -1.96
Ubp1Q811S7 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Ubp1Q811S7 Gm43602-201ENSMUST00000196772 300 ntBASIC2.83□□□□□ -1.96
Ubp1Q811S7 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Ubp1Q811S7 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Ubp1Q811S7 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Ubp1Q811S7 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ubp1Q811S7 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ubp1Q811S7 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.82□□□□□ -1.96
Ubp1Q811S7 Gm27668-201ENSMUST00000184188 120 ntBASIC2.82□□□□□ -1.96
Ubp1Q811S7 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Ubp1Q811S7 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.81□□□□□ -1.96
Ubp1Q811S7 Gm12954-201ENSMUST00000118610 611 ntBASIC2.81□□□□□ -1.96
Ubp1Q811S7 Gm13588-201ENSMUST00000120026 135 ntBASIC2.81□□□□□ -1.96
Ubp1Q811S7 Gm22228-201ENSMUST00000157364 101 ntBASIC2.81□□□□□ -1.96
Ubp1Q811S7 Gm16584-201ENSMUST00000159267 189 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 151.4 ms