Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm23504-201ENSMUST00000158988 95 ntBASIC3.02□□□□□ -1.93
Trim56Q80VI1 Gm22756-201ENSMUST00000180118 107 ntBASIC3.02□□□□□ -1.93
Trim56Q80VI1 Mir7013-201ENSMUST00000183540 72 ntBASIC3.02□□□□□ -1.93
Trim56Q80VI1 Gm29658-201ENSMUST00000185404 230 ntBASIC3.02□□□□□ -1.93
Trim56Q80VI1 Gm18665-201ENSMUST00000189783 270 ntBASIC3.02□□□□□ -1.93
Trim56Q80VI1 Gm43602-201ENSMUST00000196772 300 ntBASIC3.02□□□□□ -1.93
Trim56Q80VI1 Gm43898-201ENSMUST00000204456 424 ntBASIC3.02□□□□□ -1.93
Trim56Q80VI1 Gm26054-201ENSMUST00000083037 107 ntBASIC3.02□□□□□ -1.93
Trim56Q80VI1 Gm24492-201ENSMUST00000083798 107 ntBASIC3.02□□□□□ -1.93
Trim56Q80VI1 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.02□□□□□ -1.93
Trim56Q80VI1 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim56Q80VI1 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim56Q80VI1 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trim56Q80VI1 Gm14567-201ENSMUST00000117155 174 ntBASIC3.01□□□□□ -1.93
Trim56Q80VI1 Gm26150-201ENSMUST00000157426 151 ntBASIC3.01□□□□□ -1.93
Trim56Q80VI1 Gm22946-201ENSMUST00000158558 82 ntBASIC3.01□□□□□ -1.93
Trim56Q80VI1 Gm25711-201ENSMUST00000158633 128 ntBASIC3.01□□□□□ -1.93
Trim56Q80VI1 Gm22510-201ENSMUST00000179304 79 ntBASIC3.01□□□□□ -1.93
Trim56Q80VI1 Gm26336-201ENSMUST00000179449 79 ntBASIC3.01□□□□□ -1.93
Trim56Q80VI1 Gm26390-201ENSMUST00000179628 79 ntBASIC3.01□□□□□ -1.93
Trim56Q80VI1 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trim56Q80VI1 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.01□□□□□ -1.93
Trim56Q80VI1 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trim56Q80VI1 Gm15067-201ENSMUST00000119534 156 ntBASIC3□□□□□ -1.93
Trim56Q80VI1 Gm23470-201ENSMUST00000157129 120 ntBASIC3□□□□□ -1.93
Trim56Q80VI1 Gm24916-201ENSMUST00000157287 79 ntBASIC3□□□□□ -1.93
Trim56Q80VI1 Gm22858-201ENSMUST00000174972 76 ntBASIC3□□□□□ -1.93
Trim56Q80VI1 Gm6060-201ENSMUST00000188671 251 ntBASIC3□□□□□ -1.93
Trim56Q80VI1 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3□□□□□ -1.93
Trim56Q80VI1 Gm18346-201ENSMUST00000216782 325 ntBASIC3□□□□□ -1.93
Trim56Q80VI1 AC125350.4-201ENSMUST00000225895 273 ntBASIC3□□□□□ -1.93
Trim56Q80VI1 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim56Q80VI1 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.99□□□□□ -1.93
Trim56Q80VI1 Mir1195-201ENSMUST00000116818 98 ntBASIC2.99□□□□□ -1.93
Trim56Q80VI1 Gm23600-201ENSMUST00000157260 71 ntBASIC2.99□□□□□ -1.93
Trim56Q80VI1 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.99□□□□□ -1.93
Trim56Q80VI1 Gm44358-201ENSMUST00000196301 98 ntBASIC2.99□□□□□ -1.93
Trim56Q80VI1 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trim56Q80VI1 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.99□□□□□ -1.93
Trim56Q80VI1 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.99□□□□□ -1.93
Trim56Q80VI1 Gm23303-201ENSMUST00000082714 152 ntBASIC2.99□□□□□ -1.93
Trim56Q80VI1 Gm26494-201ENSMUST00000083154 143 ntBASIC2.99□□□□□ -1.93
Trim56Q80VI1 Mir29c-201ENSMUST00000083614 88 ntBASIC2.99□□□□□ -1.93
Trim56Q80VI1 Gm24493-201ENSMUST00000083805 143 ntBASIC2.99□□□□□ -1.93
Trim56Q80VI1 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm25089-201ENSMUST00000102015 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm14843-201ENSMUST00000119596 212 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm25828-201ENSMUST00000157087 95 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm25840-201ENSMUST00000177821 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm24952-201ENSMUST00000177909 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm23682-201ENSMUST00000178146 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm24652-201ENSMUST00000178223 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm22629-201ENSMUST00000178272 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm24021-201ENSMUST00000178435 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm22274-201ENSMUST00000178441 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm22050-201ENSMUST00000178442 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm23688-201ENSMUST00000178502 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm23944-201ENSMUST00000178607 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm26283-201ENSMUST00000178625 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm25452-201ENSMUST00000178776 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm23286-201ENSMUST00000178963 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm22640-201ENSMUST00000179035 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm25984-201ENSMUST00000179129 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm25585-201ENSMUST00000179469 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm26374-201ENSMUST00000179737 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm24040-201ENSMUST00000179786 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm25017-201ENSMUST00000179805 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm23618-201ENSMUST00000179912 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm26284-201ENSMUST00000180107 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm24570-201ENSMUST00000180314 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm24654-201ENSMUST00000180315 79 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm44921-201ENSMUST00000205290 301 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm24536-201ENSMUST00000083144 107 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.98□□□□□ -1.93
Trim56Q80VI1 Gm22752-201ENSMUST00000102083 109 ntBASIC2.97□□□□□ -1.93
Trim56Q80VI1 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trim56Q80VI1 Gm26105-201ENSMUST00000157253 190 ntBASIC2.97□□□□□ -1.93
Trim56Q80VI1 Mir3103-201ENSMUST00000175474 67 ntBASIC2.97□□□□□ -1.93
Trim56Q80VI1 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.97□□□□□ -1.93
Trim56Q80VI1 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.97□□□□□ -1.93
Trim56Q80VI1 mt-Tf-201ENSMUST00000082387 68 ntBASIC2.97□□□□□ -1.93
Trim56Q80VI1 Gm22622-201ENSMUST00000082870 129 ntBASIC2.97□□□□□ -1.93
Trim56Q80VI1 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trim56Q80VI1 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Trim56Q80VI1 Gm23803-201ENSMUST00000104610 132 ntBASIC2.96□□□□□ -1.94
Trim56Q80VI1 Gm24274-201ENSMUST00000116787 124 ntBASIC2.96□□□□□ -1.94
Trim56Q80VI1 Gm11644-201ENSMUST00000119735 150 ntBASIC2.96□□□□□ -1.94
Trim56Q80VI1 Gm24747-201ENSMUST00000157835 87 ntBASIC2.96□□□□□ -1.94
Trim56Q80VI1 Gm24436-201ENSMUST00000157889 302 ntBASIC2.96□□□□□ -1.94
Trim56Q80VI1 Gm24634-201ENSMUST00000158672 107 ntBASIC2.96□□□□□ -1.94
Trim56Q80VI1 Gm6788-201ENSMUST00000166459 270 ntBASIC2.96□□□□□ -1.94
Trim56Q80VI1 Gm24816-201ENSMUST00000175311 151 ntBASIC2.96□□□□□ -1.94
Trim56Q80VI1 Gm27527-201ENSMUST00000183903 99 ntBASIC2.96□□□□□ -1.94
Trim56Q80VI1 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.96□□□□□ -1.94
Trim56Q80VI1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms