Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Ctdp1Q7TSG2 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.23□□□□□ -2.05
Ctdp1Q7TSG2 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.23□□□□□ -2.05
Ctdp1Q7TSG2 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.23□□□□□ -2.05
Ctdp1Q7TSG2 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.23□□□□□ -2.05
Ctdp1Q7TSG2 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Ctdp1Q7TSG2 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Ctdp1Q7TSG2 Gm24283-201ENSMUST00000104233 107 ntBASIC2.22□□□□□ -2.05
Ctdp1Q7TSG2 Gm22281-201ENSMUST00000157198 103 ntBASIC2.22□□□□□ -2.05
Ctdp1Q7TSG2 Gm23548-201ENSMUST00000158963 106 ntBASIC2.22□□□□□ -2.05
Ctdp1Q7TSG2 Mir6388-201ENSMUST00000184417 75 ntBASIC2.22□□□□□ -2.05
Ctdp1Q7TSG2 Gm43512-201ENSMUST00000198495 176 ntBASIC2.22□□□□□ -2.05
Ctdp1Q7TSG2 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.22□□□□□ -2.05
Ctdp1Q7TSG2 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.22□□□□□ -2.05
Ctdp1Q7TSG2 Snord82-201ENSMUST00000082889 70 ntBASIC2.22□□□□□ -2.05
Ctdp1Q7TSG2 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Mir767-201ENSMUST00000103256 107 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm23950-201ENSMUST00000104026 129 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm13588-201ENSMUST00000120026 135 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm25914-201ENSMUST00000157618 153 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm24010-201ENSMUST00000157731 282 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm22803-201ENSMUST00000158049 283 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm27928-201ENSMUST00000183747 256 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Mir6997-201ENSMUST00000184313 71 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm28992-201ENSMUST00000190534 139 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm37624-201ENSMUST00000193751 219 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm44352-201ENSMUST00000196358 110 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm44938-201ENSMUST00000208614 427 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm11351-202ENSMUST00000225724 478 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm23678-201ENSMUST00000083157 107 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Gm24762-201ENSMUST00000083689 104 ntBASIC2.21□□□□□ -2.06
Ctdp1Q7TSG2 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Gm24132-201ENSMUST00000104745 91 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Gm24440-201ENSMUST00000157236 63 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Gm23230-201ENSMUST00000157298 133 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Gm22217-201ENSMUST00000157556 313 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Gm25051-201ENSMUST00000158602 249 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Gm25491-201ENSMUST00000158733 308 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Gm17113-201ENSMUST00000170118 171 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Gm24512-201ENSMUST00000174963 65 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Gm26435-201ENSMUST00000179026 107 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Mir7683-201ENSMUST00000183842 61 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Snora19-201ENSMUST00000082962 132 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Gm23658-201ENSMUST00000083233 132 ntBASIC2.2□□□□□ -2.06
Ctdp1Q7TSG2 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Gm25538-201ENSMUST00000101943 107 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Gm24098-201ENSMUST00000102075 109 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Gm25381-201ENSMUST00000102078 109 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Gm26077-201ENSMUST00000104064 123 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Gm25424-201ENSMUST00000157612 58 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Gm26405-201ENSMUST00000158495 100 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Gm23342-201ENSMUST00000158958 115 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Gm17528-201ENSMUST00000171026 239 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Gm27465-201ENSMUST00000184290 91 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Gm37918-201ENSMUST00000192071 120 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Mir384-201ENSMUST00000083565 88 ntBASIC2.19□□□□□ -2.06
Ctdp1Q7TSG2 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Gm15692-201ENSMUST00000152173 352 ntBASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Gm25428-201ENSMUST00000157608 114 ntBASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Gm24237-201ENSMUST00000157790 132 ntBASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Gm22159-201ENSMUST00000158412 130 ntBASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Rnu7-201ENSMUST00000158458 62 ntBASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Gm23813-201ENSMUST00000175153 77 ntBASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Mir7016-201ENSMUST00000184308 72 ntBASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Mir7026-201ENSMUST00000184384 67 ntBASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Gm9156-201ENSMUST00000189660 463 ntBASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Ctdp1Q7TSG2 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Ctdp1Q7TSG2 Gm23578-201ENSMUST00000103943 104 ntBASIC2.17□□□□□ -2.06
Ctdp1Q7TSG2 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.17□□□□□ -2.06
Ctdp1Q7TSG2 Gm23469-201ENSMUST00000157131 104 ntBASIC2.17□□□□□ -2.06
Ctdp1Q7TSG2 Gm26482-201ENSMUST00000158015 62 ntBASIC2.17□□□□□ -2.06
Ctdp1Q7TSG2 Gm24851-201ENSMUST00000158028 103 ntBASIC2.17□□□□□ -2.06
Ctdp1Q7TSG2 Gm23854-201ENSMUST00000158378 108 ntBASIC2.17□□□□□ -2.06
Ctdp1Q7TSG2 Gm22075-201ENSMUST00000158599 192 ntBASIC2.17□□□□□ -2.06
Ctdp1Q7TSG2 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ctdp1Q7TSG2 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.16□□□□□ -2.06
Ctdp1Q7TSG2 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ctdp1Q7TSG2 Gm25377-201ENSMUST00000104334 129 ntBASIC2.16□□□□□ -2.06
Ctdp1Q7TSG2 Gm15861-201ENSMUST00000120979 339 ntBASIC2.16□□□□□ -2.06
Ctdp1Q7TSG2 Gm23670-201ENSMUST00000157469 119 ntBASIC2.16□□□□□ -2.06
Ctdp1Q7TSG2 Gm22767-201ENSMUST00000158365 165 ntBASIC2.16□□□□□ -2.06
Ctdp1Q7TSG2 Gm20477-201ENSMUST00000174028 280 ntBASIC2.16□□□□□ -2.06
Ctdp1Q7TSG2 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Ctdp1Q7TSG2 Gm22286-201ENSMUST00000179708 107 ntBASIC2.16□□□□□ -2.06
Ctdp1Q7TSG2 Gm26864-201ENSMUST00000181346 156 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 146.7 ms