Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm22047-201ENSMUST00000179176 94 ntBASIC-0.2□□□□□ -2.44
Nup98Q6PFD9 Gm28848-201ENSMUST00000189984 168 ntBASIC-0.2□□□□□ -2.44
Nup98Q6PFD9 Mir691-201ENSMUST00000199719 78 ntBASIC-0.2□□□□□ -2.44
Nup98Q6PFD9 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.2□□□□□ -2.44
Nup98Q6PFD9 Gm14989-201ENSMUST00000120497 207 ntBASIC-0.21□□□□□ -2.44
Nup98Q6PFD9 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.21□□□□□ -2.44
Nup98Q6PFD9 Gm23996-201ENSMUST00000158062 131 ntBASIC-0.21□□□□□ -2.44
Nup98Q6PFD9 Gm23024-201ENSMUST00000158770 292 ntBASIC-0.21□□□□□ -2.44
Nup98Q6PFD9 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
Nup98Q6PFD9 Gm28343-201ENSMUST00000185386 112 ntBASIC-0.21□□□□□ -2.44
Nup98Q6PFD9 Gm42475-201ENSMUST00000201212 295 ntBASIC-0.21□□□□□ -2.44
Nup98Q6PFD9 Gm22685-201ENSMUST00000082848 106 ntBASIC-0.21□□□□□ -2.44
Nup98Q6PFD9 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.22□□□□□ -2.44
Nup98Q6PFD9 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.22□□□□□ -2.44
Nup98Q6PFD9 Gm22186-201ENSMUST00000157822 122 ntBASIC-0.22□□□□□ -2.44
Nup98Q6PFD9 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.22□□□□□ -2.44
Nup98Q6PFD9 Gm22743-201ENSMUST00000083445 133 ntBASIC-0.22□□□□□ -2.44
Nup98Q6PFD9 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.22□□□□□ -2.45
Nup98Q6PFD9 Defb44-ps-201ENSMUST00000126871 219 ntBASIC-0.22□□□□□ -2.45
Nup98Q6PFD9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.22□□□□□ -2.45
Nup98Q6PFD9 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.22□□□□□ -2.45
Nup98Q6PFD9 Mir6346-201ENSMUST00000183982 81 ntBASIC-0.22□□□□□ -2.45
Nup98Q6PFD9 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC-0.22□□□□□ -2.45
Nup98Q6PFD9 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.22□□□□□ -2.45
Nup98Q6PFD9 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.23□□□□□ -2.45
Nup98Q6PFD9 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.23□□□□□ -2.45
Nup98Q6PFD9 Gm23898-201ENSMUST00000158111 103 ntBASIC-0.23□□□□□ -2.45
Nup98Q6PFD9 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.23□□□□□ -2.45
Nup98Q6PFD9 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC-0.23□□□□□ -2.45
Nup98Q6PFD9 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.23□□□□□ -2.45
Nup98Q6PFD9 Snord68-201ENSMUST00000082516 86 ntBASIC-0.23□□□□□ -2.45
Nup98Q6PFD9 Mir465-201ENSMUST00000093563 74 ntBASIC-0.23□□□□□ -2.45
Nup98Q6PFD9 Mir490-201ENSMUST00000093567 84 ntBASIC-0.23□□□□□ -2.45
Nup98Q6PFD9 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC-0.24□□□□□ -2.45
Nup98Q6PFD9 AC157476.1-201ENSMUST00000215555 169 ntBASIC-0.24□□□□□ -2.45
Nup98Q6PFD9 Gm24966-201ENSMUST00000082443 79 ntBASIC-0.24□□□□□ -2.45
Nup98Q6PFD9 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.24□□□□□ -2.45
Nup98Q6PFD9 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.24□□□□□ -2.45
Nup98Q6PFD9 Mir195b-201ENSMUST00000184814 97 ntBASIC-0.24□□□□□ -2.45
Nup98Q6PFD9 Gm45315-201ENSMUST00000209283 333 ntBASIC-0.24□□□□□ -2.45
Nup98Q6PFD9 AC102291.2-201ENSMUST00000228083 367 ntBASIC-0.24□□□□□ -2.45
Nup98Q6PFD9 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.24□□□□□ -2.45
Nup98Q6PFD9 Gm23503-201ENSMUST00000083903 107 ntBASIC-0.24□□□□□ -2.45
Nup98Q6PFD9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Nup98Q6PFD9 Mir872-201ENSMUST00000104728 81 ntBASIC-0.25□□□□□ -2.45
Nup98Q6PFD9 Gm16242-201ENSMUST00000117741 334 ntBASIC-0.25□□□□□ -2.45
Nup98Q6PFD9 Gm26149-201ENSMUST00000157432 108 ntBASIC-0.25□□□□□ -2.45
Nup98Q6PFD9 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.25□□□□□ -2.45
Nup98Q6PFD9 Gm44990-201ENSMUST00000203922 217 ntBASIC-0.25□□□□□ -2.45
Nup98Q6PFD9 AC116589.9-201ENSMUST00000221462 908 ntBASIC-0.25□□□□□ -2.45
Nup98Q6PFD9 AC154506.3-201ENSMUST00000225417 213 ntBASIC-0.25□□□□□ -2.45
Nup98Q6PFD9 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.25□□□□□ -2.45
Nup98Q6PFD9 Gm22229-201ENSMUST00000082987 108 ntBASIC-0.25□□□□□ -2.45
Nup98Q6PFD9 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.26□□□□□ -2.45
Nup98Q6PFD9 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.26□□□□□ -2.45
Nup98Q6PFD9 Gm23416-201ENSMUST00000175520 95 ntBASIC-0.26□□□□□ -2.45
Nup98Q6PFD9 Gm25670-201ENSMUST00000178423 107 ntBASIC-0.26□□□□□ -2.45
Nup98Q6PFD9 Gm26239-201ENSMUST00000178842 107 ntBASIC-0.26□□□□□ -2.45
Nup98Q6PFD9 Gm27490-201ENSMUST00000184754 128 ntBASIC-0.26□□□□□ -2.45
Nup98Q6PFD9 Gm19777-201ENSMUST00000191940 358 ntBASIC-0.26□□□□□ -2.45
Nup98Q6PFD9 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
Nup98Q6PFD9 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.26□□□□□ -2.45
Nup98Q6PFD9 AC164297.3-201ENSMUST00000224238 94 ntBASIC-0.26□□□□□ -2.45
Nup98Q6PFD9 Gm24292-201ENSMUST00000082888 107 ntBASIC-0.26□□□□□ -2.45
Nup98Q6PFD9 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Snord89-201ENSMUST00000104516 110 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Gm22200-201ENSMUST00000158614 67 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Gm26200-201ENSMUST00000180273 79 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 AC116465.1-201ENSMUST00000220324 235 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 AC117656.1-201ENSMUST00000225826 339 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Gm16358-201ENSMUST00000146046 210 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Gm25300-201ENSMUST00000175284 84 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
Nup98Q6PFD9 Mir654-201ENSMUST00000104787 84 ntBASIC-0.28□□□□□ -2.45
Nup98Q6PFD9 Gm14803-201ENSMUST00000117163 361 ntBASIC-0.28□□□□□ -2.45
Nup98Q6PFD9 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.28□□□□□ -2.45
Nup98Q6PFD9 Gm12143-201ENSMUST00000119666 332 ntBASIC-0.28□□□□□ -2.45
Nup98Q6PFD9 Gm14782-201ENSMUST00000120151 195 ntBASIC-0.28□□□□□ -2.45
Nup98Q6PFD9 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.28□□□□□ -2.45
Nup98Q6PFD9 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-0.28□□□□□ -2.45
Nup98Q6PFD9 Gm23851-201ENSMUST00000083831 103 ntBASIC-0.28□□□□□ -2.45
Nup98Q6PFD9 Gm23169-201ENSMUST00000157157 112 ntBASIC-0.29□□□□□ -2.46
Nup98Q6PFD9 Gm20391-201ENSMUST00000174722 106 ntBASIC-0.29□□□□□ -2.46
Nup98Q6PFD9 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.29□□□□□ -2.46
Nup98Q6PFD9 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.29□□□□□ -2.46
Nup98Q6PFD9 Gm28256-201ENSMUST00000188953 139 ntBASIC-0.29□□□□□ -2.46
Nup98Q6PFD9 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.29□□□□□ -2.46
Nup98Q6PFD9 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.29□□□□□ -2.46
Nup98Q6PFD9 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.29□□□□□ -2.46
Nup98Q6PFD9 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.29□□□□□ -2.46
Nup98Q6PFD9 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.29□□□□□ -2.46
Nup98Q6PFD9 Snora75-201ENSMUST00000082903 133 ntBASIC-0.29□□□□□ -2.46
Nup98Q6PFD9 Gm26066-201ENSMUST00000083385 109 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 234.3 ms