Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm24440-201ENSMUST00000157236 63 ntBASIC1.6□□□□□ -2.15
Ctr9Q62018 Gm17113-201ENSMUST00000170118 171 ntBASIC1.6□□□□□ -2.15
Ctr9Q62018 Gm24512-201ENSMUST00000174963 65 ntBASIC1.6□□□□□ -2.15
Ctr9Q62018 Gm25035-201ENSMUST00000175414 77 ntBASIC1.6□□□□□ -2.15
Ctr9Q62018 Gm23267-201ENSMUST00000178490 132 ntBASIC1.6□□□□□ -2.15
Ctr9Q62018 Gm37693-201ENSMUST00000194562 234 ntBASIC1.6□□□□□ -2.15
Ctr9Q62018 Gm44483-201ENSMUST00000197203 97 ntBASIC1.6□□□□□ -2.15
Ctr9Q62018 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.6□□□□□ -2.15
Ctr9Q62018 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.6□□□□□ -2.15
Ctr9Q62018 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Ctr9Q62018 Gm14937-201ENSMUST00000119709 208 ntBASIC1.59□□□□□ -2.15
Ctr9Q62018 Gm14792-201ENSMUST00000119725 258 ntBASIC1.59□□□□□ -2.15
Ctr9Q62018 Gm22321-201ENSMUST00000157152 104 ntBASIC1.59□□□□□ -2.15
Ctr9Q62018 Gm24225-201ENSMUST00000158825 98 ntBASIC1.59□□□□□ -2.15
Ctr9Q62018 Gm24668-201ENSMUST00000158935 104 ntBASIC1.59□□□□□ -2.15
Ctr9Q62018 Gm25615-201ENSMUST00000177836 94 ntBASIC1.59□□□□□ -2.15
Ctr9Q62018 Gm42774-201ENSMUST00000198854 283 ntBASIC1.59□□□□□ -2.15
Ctr9Q62018 Snora3-201ENSMUST00000083082 132 ntBASIC1.59□□□□□ -2.15
Ctr9Q62018 Gm23451-201ENSMUST00000083328 122 ntBASIC1.59□□□□□ -2.15
Ctr9Q62018 Gm25513-201ENSMUST00000083861 162 ntBASIC1.59□□□□□ -2.15
Ctr9Q62018 Gm10222-201ENSMUST00000088336 294 ntBASIC1.59□□□□□ -2.15
Ctr9Q62018 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.59□□□□□ -2.16
Ctr9Q62018 Gm14491-201ENSMUST00000121919 199 ntBASIC1.58□□□□□ -2.16
Ctr9Q62018 Gm27747-201ENSMUST00000184707 85 ntBASIC1.58□□□□□ -2.16
Ctr9Q62018 Gm21064-202ENSMUST00000190583 278 ntBASIC1.58□□□□□ -2.16
Ctr9Q62018 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.58□□□□□ -2.16
Ctr9Q62018 Gm23370-201ENSMUST00000199545 130 ntBASIC1.58□□□□□ -2.16
Ctr9Q62018 Gm26379-202ENSMUST00000200225 132 ntBASIC1.58□□□□□ -2.16
Ctr9Q62018 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Ctr9Q62018 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.58□□□□□ -2.16
Ctr9Q62018 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.58□□□□□ -2.16
Ctr9Q62018 Mir223-201ENSMUST00000102112 110 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm25111-201ENSMUST00000116686 147 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm14883-201ENSMUST00000120179 157 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm23390-201ENSMUST00000157393 106 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm23536-201ENSMUST00000157541 134 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm25914-201ENSMUST00000157618 153 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm26022-201ENSMUST00000158663 108 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm23182-201ENSMUST00000158688 135 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Mir3098-201ENSMUST00000175416 87 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm22118-201ENSMUST00000175593 171 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm23714-201ENSMUST00000179259 105 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm27421-201ENSMUST00000184729 167 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm38019-201ENSMUST00000195133 380 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm44352-201ENSMUST00000196358 110 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm24204-201ENSMUST00000082950 107 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm24042-201ENSMUST00000083114 103 ntBASIC1.57□□□□□ -2.16
Ctr9Q62018 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.56□□□□□ -2.16
Ctr9Q62018 Gm26339-201ENSMUST00000102368 99 ntBASIC1.56□□□□□ -2.16
Ctr9Q62018 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.56□□□□□ -2.16
Ctr9Q62018 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ctr9Q62018 Gm25333-201ENSMUST00000158035 246 ntBASIC1.56□□□□□ -2.16
Ctr9Q62018 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.56□□□□□ -2.16
Ctr9Q62018 Gm25820-201ENSMUST00000198589 127 ntBASIC1.56□□□□□ -2.16
Ctr9Q62018 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.56□□□□□ -2.16
Ctr9Q62018 Mir155-201ENSMUST00000083463 65 ntBASIC1.56□□□□□ -2.16
Ctr9Q62018 Gm23656-201ENSMUST00000122626 112 ntBASIC1.55□□□□□ -2.16
Ctr9Q62018 Gm24635-201ENSMUST00000122712 128 ntBASIC1.55□□□□□ -2.16
Ctr9Q62018 Gm22551-201ENSMUST00000157795 103 ntBASIC1.55□□□□□ -2.16
Ctr9Q62018 Gm25730-201ENSMUST00000178753 165 ntBASIC1.55□□□□□ -2.16
Ctr9Q62018 Gm27326-201ENSMUST00000183504 95 ntBASIC1.55□□□□□ -2.16
Ctr9Q62018 Mir7063-201ENSMUST00000184158 91 ntBASIC1.55□□□□□ -2.16
Ctr9Q62018 Mir7665-201ENSMUST00000184907 63 ntBASIC1.55□□□□□ -2.16
Ctr9Q62018 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.55□□□□□ -2.16
Ctr9Q62018 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.55□□□□□ -2.16
Ctr9Q62018 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm24909-201ENSMUST00000157290 280 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Mir1951-201ENSMUST00000157981 89 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm22450-201ENSMUST00000179641 107 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm25936-201ENSMUST00000179952 114 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm25473-201ENSMUST00000180191 107 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Mir6419-201ENSMUST00000184784 113 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Ctr9Q62018 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm22248-201ENSMUST00000082482 150 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm24856-201ENSMUST00000082809 107 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm25204-201ENSMUST00000082843 106 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm26071-201ENSMUST00000083261 107 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm23100-201ENSMUST00000083455 141 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Gm24521-201ENSMUST00000083958 107 ntBASIC1.54□□□□□ -2.16
Ctr9Q62018 Mir293-201ENSMUST00000104841 80 ntBASIC1.53□□□□□ -2.16
Ctr9Q62018 Gm13711-201ENSMUST00000119708 453 ntBASIC1.53□□□□□ -2.16
Ctr9Q62018 Gm25664-201ENSMUST00000157697 107 ntBASIC1.53□□□□□ -2.16
Ctr9Q62018 Gm26004-201ENSMUST00000158804 116 ntBASIC1.53□□□□□ -2.16
Ctr9Q62018 Gm26287-201ENSMUST00000158887 81 ntBASIC1.53□□□□□ -2.16
Ctr9Q62018 Mir3057-201ENSMUST00000175040 91 ntBASIC1.53□□□□□ -2.16
Ctr9Q62018 Gm27711-201ENSMUST00000183802 118 ntBASIC1.53□□□□□ -2.16
Ctr9Q62018 Mir6540-201ENSMUST00000184886 108 ntBASIC1.53□□□□□ -2.16
Ctr9Q62018 Gm28912-201ENSMUST00000189001 234 ntBASIC1.53□□□□□ -2.16
Ctr9Q62018 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Ctr9Q62018 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Ctr9Q62018 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.52□□□□□ -2.17
Ctr9Q62018 Gm22279-201ENSMUST00000157200 93 ntBASIC1.52□□□□□ -2.17
Ctr9Q62018 Gm37089-201ENSMUST00000195616 129 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 169.9 ms