Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Mir301-201ENSMUST00000083655 86 ntBASIC3.8□□□□□ -1.8
Scaf1Q5U4C3 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scaf1Q5U4C3 Gm23128-201ENSMUST00000104257 132 ntBASIC3.79□□□□□ -1.8
Scaf1Q5U4C3 Gm25879-201ENSMUST00000104330 107 ntBASIC3.79□□□□□ -1.8
Scaf1Q5U4C3 Gm23128-202ENSMUST00000196578 133 ntBASIC3.79□□□□□ -1.8
Scaf1Q5U4C3 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.79□□□□□ -1.8
Scaf1Q5U4C3 Gm44903-201ENSMUST00000206840 130 ntBASIC3.79□□□□□ -1.8
Scaf1Q5U4C3 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.79□□□□□ -1.8
Scaf1Q5U4C3 AC152951.2-201ENSMUST00000218293 3587 ntBASIC3.79□□□□□ -1.8
Scaf1Q5U4C3 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm24049-201ENSMUST00000102409 100 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm15069-201ENSMUST00000117792 192 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm15068-201ENSMUST00000119796 192 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm26049-201ENSMUST00000157313 108 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm22349-201ENSMUST00000157864 107 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm23277-201ENSMUST00000157914 136 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm23854-201ENSMUST00000158378 108 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm24634-201ENSMUST00000158672 107 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm25528-201ENSMUST00000180264 132 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm29613-201ENSMUST00000185846 313 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm29544-201ENSMUST00000188860 313 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm28808-201ENSMUST00000190978 313 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm42960-201ENSMUST00000202160 241 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm24038-201ENSMUST00000082872 159 ntBASIC3.78□□□□□ -1.8
Scaf1Q5U4C3 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Gm44680-201ENSMUST00000208414 2910 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Gm22416-201ENSMUST00000158590 88 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Gm25119-201ENSMUST00000158815 88 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Gm25996-201ENSMUST00000175393 117 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Snord93-201ENSMUST00000175580 71 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Mir6353-201ENSMUST00000183596 113 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Mir7050-201ENSMUST00000184636 60 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Gm19194-201ENSMUST00000192015 3774 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.77□□□□□ -1.81
Scaf1Q5U4C3 Gm22782-201ENSMUST00000104082 132 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 Gm22105-201ENSMUST00000116734 116 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 Gm14626-201ENSMUST00000117619 216 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 Gm13246-201ENSMUST00000120994 315 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 Gm25153-201ENSMUST00000157118 156 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 Gm23260-201ENSMUST00000158317 172 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 Gm23113-201ENSMUST00000158477 99 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 Gm44976-201ENSMUST00000205543 261 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 Gm25812-201ENSMUST00000082751 103 ntBASIC3.76□□□□□ -1.81
Scaf1Q5U4C3 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Scaf1Q5U4C3 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Scaf1Q5U4C3 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Scaf1Q5U4C3 Gm25828-201ENSMUST00000157087 95 ntBASIC3.75□□□□□ -1.81
Scaf1Q5U4C3 Gm24443-201ENSMUST00000157242 132 ntBASIC3.75□□□□□ -1.81
Scaf1Q5U4C3 Gm22961-201ENSMUST00000157964 106 ntBASIC3.75□□□□□ -1.81
Scaf1Q5U4C3 Gm24816-201ENSMUST00000175311 151 ntBASIC3.75□□□□□ -1.81
Scaf1Q5U4C3 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
Scaf1Q5U4C3 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.74□□□□□ -1.81
Scaf1Q5U4C3 Gm44921-201ENSMUST00000205290 301 ntBASIC3.74□□□□□ -1.81
Scaf1Q5U4C3 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.74□□□□□ -1.81
Scaf1Q5U4C3 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.74□□□□□ -1.81
Scaf1Q5U4C3 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.73□□□□□ -1.81
Scaf1Q5U4C3 Gm25466-201ENSMUST00000103995 132 ntBASIC3.73□□□□□ -1.81
Scaf1Q5U4C3 Gm22279-201ENSMUST00000157200 93 ntBASIC3.73□□□□□ -1.81
Scaf1Q5U4C3 Gm22966-201ENSMUST00000157957 129 ntBASIC3.73□□□□□ -1.81
Scaf1Q5U4C3 Gm26157-201ENSMUST00000158974 126 ntBASIC3.73□□□□□ -1.81
Scaf1Q5U4C3 Gm37807-201ENSMUST00000194310 190 ntBASIC3.73□□□□□ -1.81
Scaf1Q5U4C3 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.73□□□□□ -1.81
Scaf1Q5U4C3 Gm46233-201ENSMUST00000217831 449 ntBASIC3.73□□□□□ -1.81
Scaf1Q5U4C3 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.73□□□□□ -1.81
Scaf1Q5U4C3 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Scaf1Q5U4C3 Mir499-201ENSMUST00000102357 79 ntBASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Mir344c-201ENSMUST00000103919 92 ntBASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Gm25500-201ENSMUST00000104426 123 ntBASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Gm24922-201ENSMUST00000158511 102 ntBASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Gm22775-201ENSMUST00000177630 120 ntBASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Gm23569-201ENSMUST00000180120 120 ntBASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Gm9251-201ENSMUST00000197202 628 ntBASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Gm44555-201ENSMUST00000209008 148 ntBASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Gm45791-201ENSMUST00000212908 352 ntBASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Snord7-201ENSMUST00000083781 97 ntBASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 AC158598.2-201ENSMUST00000213397 3832 ntBASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Scaf1Q5U4C3 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scaf1Q5U4C3 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Scaf1Q5U4C3 Gm24122-201ENSMUST00000104107 132 ntBASIC3.71□□□□□ -1.82
Scaf1Q5U4C3 Gm22768-201ENSMUST00000158366 153 ntBASIC3.71□□□□□ -1.82
Scaf1Q5U4C3 Mir3103-201ENSMUST00000175474 67 ntBASIC3.71□□□□□ -1.82
Scaf1Q5U4C3 Ighv1-1-201ENSMUST00000194912 291 ntBASIC3.71□□□□□ -1.82
Scaf1Q5U4C3 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.71□□□□□ -1.82
Scaf1Q5U4C3 Mir201-201ENSMUST00000083470 66 ntBASIC3.71□□□□□ -1.82
Scaf1Q5U4C3 Gm24475-201ENSMUST00000157435 143 ntBASIC3.7□□□□□ -1.82
Scaf1Q5U4C3 Gm22946-201ENSMUST00000158558 82 ntBASIC3.7□□□□□ -1.82
Scaf1Q5U4C3 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Scaf1Q5U4C3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Scaf1Q5U4C3 Gm42719-201ENSMUST00000197393 355 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 175.4 ms