Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Mir7679-201ENSMUST00000183379 63 ntBASIC1.4□□□□□ -2.19
Trim40Q3UWA4 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.4□□□□□ -2.19
Trim40Q3UWA4 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.4□□□□□ -2.19
Trim40Q3UWA4 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Gm25068-201ENSMUST00000103895 110 ntBASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm23836-201ENSMUST00000104434 129 ntBASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm23170-201ENSMUST00000157158 106 ntBASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm23101-201ENSMUST00000157550 137 ntBASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm25884-201ENSMUST00000157782 62 ntBASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm26024-201ENSMUST00000158657 322 ntBASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm25235-201ENSMUST00000179933 107 ntBASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm28537-201ENSMUST00000189026 315 ntBASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm19123-201ENSMUST00000190716 651 ntBASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm29631-201ENSMUST00000191065 315 ntBASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm24038-201ENSMUST00000082872 159 ntBASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trim40Q3UWA4 Gm23907-201ENSMUST00000104595 189 ntBASIC1.38□□□□□ -2.19
Trim40Q3UWA4 Gm15379-201ENSMUST00000121224 648 ntBASIC1.38□□□□□ -2.19
Trim40Q3UWA4 Gm22559-201ENSMUST00000157329 134 ntBASIC1.38□□□□□ -2.19
Trim40Q3UWA4 Gm24229-201ENSMUST00000158830 118 ntBASIC1.38□□□□□ -2.19
Trim40Q3UWA4 Mir6336-201ENSMUST00000183581 130 ntBASIC1.38□□□□□ -2.19
Trim40Q3UWA4 Gm27517-201ENSMUST00000184347 236 ntBASIC1.38□□□□□ -2.19
Trim40Q3UWA4 Gm27332-201ENSMUST00000184893 112 ntBASIC1.38□□□□□ -2.19
Trim40Q3UWA4 Gm29014-201ENSMUST00000191422 326 ntBASIC1.38□□□□□ -2.19
Trim40Q3UWA4 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.38□□□□□ -2.19
Trim40Q3UWA4 Gm22421-201ENSMUST00000083058 107 ntBASIC1.38□□□□□ -2.19
Trim40Q3UWA4 Gm25495-201ENSMUST00000104431 131 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Mir669d-201ENSMUST00000104644 121 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Gm15214-201ENSMUST00000122155 470 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Gm24595-201ENSMUST00000122501 110 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Gm22227-201ENSMUST00000157356 259 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Snord13-201ENSMUST00000157627 104 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Gm25643-201ENSMUST00000158874 103 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Gm25707-201ENSMUST00000175120 96 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Gm24366-201ENSMUST00000175383 86 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Gm18617-201ENSMUST00000222311 259 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Gm22358-201ENSMUST00000082877 122 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Snora19-201ENSMUST00000082962 132 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Gm23658-201ENSMUST00000083233 132 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Gm25188-201ENSMUST00000083913 122 ntBASIC1.37□□□□□ -2.19
Trim40Q3UWA4 Gm14846-201ENSMUST00000121868 216 ntBASIC1.36□□□□□ -2.19
Trim40Q3UWA4 Gm23219-201ENSMUST00000158123 87 ntBASIC1.36□□□□□ -2.19
Trim40Q3UWA4 Mir669n-201ENSMUST00000158636 54 ntBASIC1.36□□□□□ -2.19
Trim40Q3UWA4 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Trim40Q3UWA4 Gm29022-201ENSMUST00000190702 225 ntBASIC1.36□□□□□ -2.19
Trim40Q3UWA4 Gm42719-201ENSMUST00000197393 355 ntBASIC1.36□□□□□ -2.19
Trim40Q3UWA4 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.36□□□□□ -2.19
Trim40Q3UWA4 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.36□□□□□ -2.19
Trim40Q3UWA4 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.36□□□□□ -2.19
Trim40Q3UWA4 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Trim40Q3UWA4 Gm13560-201ENSMUST00000121865 329 ntBASIC1.35□□□□□ -2.19
Trim40Q3UWA4 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.35□□□□□ -2.19
Trim40Q3UWA4 Gm25825-201ENSMUST00000157091 124 ntBASIC1.35□□□□□ -2.19
Trim40Q3UWA4 Gm21064-202ENSMUST00000190583 278 ntBASIC1.35□□□□□ -2.19
Trim40Q3UWA4 Gm34139-201ENSMUST00000196166 294 ntBASIC1.35□□□□□ -2.19
Trim40Q3UWA4 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.35□□□□□ -2.19
Trim40Q3UWA4 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.35□□□□□ -2.19
Trim40Q3UWA4 Gm26922-201ENSMUST00000082687 72 ntBASIC1.35□□□□□ -2.19
Trim40Q3UWA4 Gm25141-201ENSMUST00000083177 107 ntBASIC1.35□□□□□ -2.19
Trim40Q3UWA4 Gm24261-201ENSMUST00000083744 104 ntBASIC1.35□□□□□ -2.19
Trim40Q3UWA4 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.34□□□□□ -2.19
Trim40Q3UWA4 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.34□□□□□ -2.19
Trim40Q3UWA4 Gm44563-201ENSMUST00000207958 178 ntBASIC1.34□□□□□ -2.19
Trim40Q3UWA4 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.34□□□□□ -2.19
Trim40Q3UWA4 Mir148b-201ENSMUST00000083626 97 ntBASIC1.34□□□□□ -2.19
Trim40Q3UWA4 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.34□□□□□ -2.19
Trim40Q3UWA4 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.34□□□□□ -2.2
Trim40Q3UWA4 Gm22761-201ENSMUST00000102278 96 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Mir758-201ENSMUST00000103260 81 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Gm25759-201ENSMUST00000103988 129 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Gm11857-201ENSMUST00000119817 324 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Gm22099-201ENSMUST00000157925 123 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Gm24006-201ENSMUST00000158462 132 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Gm2962-201ENSMUST00000159266 336 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Gm23002-201ENSMUST00000179221 107 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Gm23571-201ENSMUST00000180073 127 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Gm27711-201ENSMUST00000183802 118 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Mir7226-201ENSMUST00000184953 60 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.33□□□□□ -2.2
Trim40Q3UWA4 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Gm24453-201ENSMUST00000083346 76 ntBASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.33□□□□□ -2.2
Trim40Q3UWA4 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Trim40Q3UWA4 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.32□□□□□ -2.2
Trim40Q3UWA4 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.32□□□□□ -2.2
Trim40Q3UWA4 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.32□□□□□ -2.2
Trim40Q3UWA4 Gm22803-201ENSMUST00000158049 283 ntBASIC1.32□□□□□ -2.2
Trim40Q3UWA4 Gm23194-201ENSMUST00000158813 105 ntBASIC1.32□□□□□ -2.2
Trim40Q3UWA4 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.32□□□□□ -2.2
Trim40Q3UWA4 Gm44325-201ENSMUST00000196757 77 ntBASIC1.32□□□□□ -2.2
Trim40Q3UWA4 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.31□□□□□ -2.2
Trim40Q3UWA4 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Trim40Q3UWA4 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms