Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm14598-201ENSMUST00000180109 468 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Gm14625-201ENSMUST00000180231 468 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Upf3bQ3ULL6 Gm22469-201ENSMUST00000104118 133 ntBASIC0.58□□□□□ -2.32
Upf3bQ3ULL6 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.58□□□□□ -2.32
Upf3bQ3ULL6 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
Upf3bQ3ULL6 Mir7079-201ENSMUST00000184697 69 ntBASIC0.58□□□□□ -2.32
Upf3bQ3ULL6 Gm18291-201ENSMUST00000190791 301 ntBASIC0.58□□□□□ -2.32
Upf3bQ3ULL6 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.58□□□□□ -2.32
Upf3bQ3ULL6 Snord33-201ENSMUST00000083694 84 ntBASIC0.58□□□□□ -2.32
Upf3bQ3ULL6 Gm25787-201ENSMUST00000104709 92 ntBASIC0.57□□□□□ -2.32
Upf3bQ3ULL6 Gm14568-201ENSMUST00000119321 294 ntBASIC0.57□□□□□ -2.32
Upf3bQ3ULL6 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.57□□□□□ -2.32
Upf3bQ3ULL6 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.57□□□□□ -2.32
Upf3bQ3ULL6 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.57□□□□□ -2.32
Upf3bQ3ULL6 Gm36956-201ENSMUST00000193830 214 ntBASIC0.57□□□□□ -2.32
Upf3bQ3ULL6 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.57□□□□□ -2.32
Upf3bQ3ULL6 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.57□□□□□ -2.32
Upf3bQ3ULL6 Gm25416-201ENSMUST00000104221 107 ntBASIC0.56□□□□□ -2.32
Upf3bQ3ULL6 Mir15a-201ENSMUST00000175266 84 ntBASIC0.56□□□□□ -2.32
Upf3bQ3ULL6 Gm44052-201ENSMUST00000203382 396 ntBASIC0.56□□□□□ -2.32
Upf3bQ3ULL6 Gm23140-201ENSMUST00000082487 107 ntBASIC0.56□□□□□ -2.32
Upf3bQ3ULL6 Gm22302-201ENSMUST00000082657 106 ntBASIC0.56□□□□□ -2.32
Upf3bQ3ULL6 Gm22656-201ENSMUST00000104199 171 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm23126-201ENSMUST00000104260 134 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm11856-201ENSMUST00000118712 276 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm13720-201ENSMUST00000120741 196 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm22482-201ENSMUST00000122563 359 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm25909-201ENSMUST00000157619 121 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm24853-201ENSMUST00000158026 121 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm24678-201ENSMUST00000158756 104 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm20391-201ENSMUST00000174722 106 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm27365-201ENSMUST00000184041 177 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm27755-201ENSMUST00000184623 132 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm19777-201ENSMUST00000191940 358 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm37997-201ENSMUST00000193515 267 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm25627-201ENSMUST00000084003 153 ntBASIC0.55□□□□□ -2.32
Upf3bQ3ULL6 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.54□□□□□ -2.32
Upf3bQ3ULL6 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Upf3bQ3ULL6 Gm23203-201ENSMUST00000104374 107 ntBASIC0.54□□□□□ -2.32
Upf3bQ3ULL6 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.54□□□□□ -2.32
Upf3bQ3ULL6 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.54□□□□□ -2.32
Upf3bQ3ULL6 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.54□□□□□ -2.32
Upf3bQ3ULL6 Gm26135-201ENSMUST00000101993 72 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 Gm14846-201ENSMUST00000121868 216 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 Gm23605-201ENSMUST00000157255 127 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 Gm25643-201ENSMUST00000158874 103 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 Gm23660-201ENSMUST00000178362 79 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 Snord50b-201ENSMUST00000178497 72 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 Gm24088-201ENSMUST00000179100 79 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 Gm27410-201ENSMUST00000183851 115 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 Gm28288-201ENSMUST00000191019 214 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 Mir468-201ENSMUST00000197332 78 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 DQ267101-201ENSMUST00000082562 73 ntBASIC0.53□□□□□ -2.32
Upf3bQ3ULL6 Gm24283-201ENSMUST00000104233 107 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm16032-201ENSMUST00000118534 168 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm22796-201ENSMUST00000157234 106 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm28435-201ENSMUST00000185496 108 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm20923-201ENSMUST00000190009 319 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm21088-201ENSMUST00000190875 316 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm23627-201ENSMUST00000082459 107 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm22502-201ENSMUST00000082488 107 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm22977-201ENSMUST00000082615 107 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm24149-201ENSMUST00000082757 107 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm24037-201ENSMUST00000082871 180 ntBASIC0.52□□□□□ -2.33
Upf3bQ3ULL6 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Gm13577-201ENSMUST00000121365 205 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Gm14491-201ENSMUST00000121919 199 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Gm24385-201ENSMUST00000122694 350 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Gm25825-201ENSMUST00000157091 124 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Gm22163-201ENSMUST00000158408 135 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Gm22888-201ENSMUST00000158640 77 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Gm23191-201ENSMUST00000179147 107 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Gm43432-201ENSMUST00000196352 121 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Gm44976-201ENSMUST00000205543 261 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.51□□□□□ -2.33
Upf3bQ3ULL6 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.5□□□□□ -2.33
Upf3bQ3ULL6 Gm23321-201ENSMUST00000104465 126 ntBASIC0.5□□□□□ -2.33
Upf3bQ3ULL6 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.5□□□□□ -2.33
Upf3bQ3ULL6 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Upf3bQ3ULL6 Gm23232-201ENSMUST00000157300 105 ntBASIC0.5□□□□□ -2.33
Upf3bQ3ULL6 Gm23783-201ENSMUST00000157941 102 ntBASIC0.5□□□□□ -2.33
Upf3bQ3ULL6 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.5□□□□□ -2.33
Upf3bQ3ULL6 Gm24150-201ENSMUST00000082759 104 ntBASIC0.5□□□□□ -2.33
Upf3bQ3ULL6 Mir32-201ENSMUST00000083610 70 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 138.4 ms