Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm24911-201ENSMUST00000157292 136 ntBASIC3.14□□□□□ -1.91
RaraP11416 Gm24718-201ENSMUST00000157521 136 ntBASIC3.14□□□□□ -1.91
RaraP11416 Mir1927-201ENSMUST00000158579 109 ntBASIC3.14□□□□□ -1.91
RaraP11416 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RaraP11416 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.14□□□□□ -1.91
RaraP11416 CT033781.2-201ENSMUST00000221113 153 ntBASIC3.14□□□□□ -1.91
RaraP11416 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.14□□□□□ -1.91
RaraP11416 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.14□□□□□ -1.91
RaraP11416 Gm25588-201ENSMUST00000082501 140 ntBASIC3.14□□□□□ -1.91
RaraP11416 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RaraP11416 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RaraP11416 Gm14568-201ENSMUST00000119321 294 ntBASIC3.13□□□□□ -1.91
RaraP11416 Gm25488-201ENSMUST00000158728 118 ntBASIC3.13□□□□□ -1.91
RaraP11416 Gm44964-201ENSMUST00000207011 273 ntBASIC3.13□□□□□ -1.91
RaraP11416 Gm19563-201ENSMUST00000222031 270 ntBASIC3.13□□□□□ -1.91
RaraP11416 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.13□□□□□ -1.91
RaraP11416 Gm23509-201ENSMUST00000083080 160 ntBASIC3.13□□□□□ -1.91
RaraP11416 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RaraP11416 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RaraP11416 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
RaraP11416 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RaraP11416 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.12□□□□□ -1.91
RaraP11416 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.12□□□□□ -1.91
RaraP11416 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RaraP11416 Gm23060-201ENSMUST00000102345 109 ntBASIC3.12□□□□□ -1.91
RaraP11416 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.12□□□□□ -1.91
RaraP11416 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RaraP11416 Gm24246-201ENSMUST00000157315 132 ntBASIC3.12□□□□□ -1.91
RaraP11416 Gm25910-201ENSMUST00000157620 140 ntBASIC3.12□□□□□ -1.91
RaraP11416 Gm22099-201ENSMUST00000157925 123 ntBASIC3.12□□□□□ -1.91
RaraP11416 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.12□□□□□ -1.91
RaraP11416 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.12□□□□□ -1.91
RaraP11416 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.12□□□□□ -1.91
RaraP11416 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RaraP11416 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RaraP11416 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.11□□□□□ -1.91
RaraP11416 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RaraP11416 Gm25466-201ENSMUST00000103995 132 ntBASIC3.11□□□□□ -1.91
RaraP11416 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.11□□□□□ -1.91
RaraP11416 Snord11-201ENSMUST00000158468 84 ntBASIC3.11□□□□□ -1.91
RaraP11416 Gm22429-201ENSMUST00000158553 130 ntBASIC3.11□□□□□ -1.91
RaraP11416 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.11□□□□□ -1.91
RaraP11416 CT009696.1-201ENSMUST00000215745 256 ntBASIC3.11□□□□□ -1.91
RaraP11416 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.11□□□□□ -1.91
RaraP11416 Gm9370-201ENSMUST00000222787 609 ntBASIC3.11□□□□□ -1.91
RaraP11416 AC126939.3-201ENSMUST00000226061 166 ntBASIC3.11□□□□□ -1.91
RaraP11416 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.1□□□□□ -1.91
RaraP11416 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
RaraP11416 Gm8260-201ENSMUST00000119230 353 ntBASIC3.1□□□□□ -1.91
RaraP11416 Gm13588-201ENSMUST00000120026 135 ntBASIC3.1□□□□□ -1.91
RaraP11416 Gm13246-201ENSMUST00000120994 315 ntBASIC3.1□□□□□ -1.91
RaraP11416 Gm23859-201ENSMUST00000158383 64 ntBASIC3.1□□□□□ -1.91
RaraP11416 Gm24736-201ENSMUST00000158862 130 ntBASIC3.1□□□□□ -1.91
RaraP11416 Snord93-201ENSMUST00000175580 71 ntBASIC3.1□□□□□ -1.91
RaraP11416 Gm27698-201ENSMUST00000184060 249 ntBASIC3.1□□□□□ -1.91
RaraP11416 Gm44932-201ENSMUST00000206799 121 ntBASIC3.1□□□□□ -1.91
RaraP11416 Gm45791-201ENSMUST00000212908 352 ntBASIC3.1□□□□□ -1.91
RaraP11416 Gm26168-201ENSMUST00000083787 112 ntBASIC3.1□□□□□ -1.91
RaraP11416 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RaraP11416 Gm42718-201ENSMUST00000197319 2681 ntBASIC3.1□□□□□ -1.91
RaraP11416 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RaraP11416 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RaraP11416 Gm6954-201ENSMUST00000117416 225 ntBASIC3.09□□□□□ -1.91
RaraP11416 Gm15289-201ENSMUST00000117793 244 ntBASIC3.09□□□□□ -1.91
RaraP11416 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
RaraP11416 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
RaraP11416 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
RaraP11416 Gm26074-201ENSMUST00000104063 129 ntBASIC3.08□□□□□ -1.92
RaraP11416 Gm15069-201ENSMUST00000117792 192 ntBASIC3.08□□□□□ -1.92
RaraP11416 Gm15068-201ENSMUST00000119796 192 ntBASIC3.08□□□□□ -1.92
RaraP11416 Gm24937-201ENSMUST00000122597 134 ntBASIC3.08□□□□□ -1.92
RaraP11416 Gm23253-201ENSMUST00000157441 104 ntBASIC3.08□□□□□ -1.92
RaraP11416 Mir8103-201ENSMUST00000183945 107 ntBASIC3.08□□□□□ -1.92
RaraP11416 Gm35736-201ENSMUST00000203681 313 ntBASIC3.08□□□□□ -1.92
RaraP11416 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.08□□□□□ -1.92
RaraP11416 Gm22306-201ENSMUST00000082692 107 ntBASIC3.08□□□□□ -1.92
RaraP11416 Mir489-201ENSMUST00000093599 107 ntBASIC3.08□□□□□ -1.92
RaraP11416 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.08□□□□□ -1.92
RaraP11416 Gm24559-201ENSMUST00000157519 121 ntBASIC3.07□□□□□ -1.92
RaraP11416 Gm23113-201ENSMUST00000158477 99 ntBASIC3.07□□□□□ -1.92
RaraP11416 Gm23409-201ENSMUST00000158516 237 ntBASIC3.07□□□□□ -1.92
RaraP11416 Gm25367-201ENSMUST00000158846 106 ntBASIC3.07□□□□□ -1.92
RaraP11416 Gm27527-201ENSMUST00000183903 99 ntBASIC3.07□□□□□ -1.92
RaraP11416 Gm44464-201ENSMUST00000198010 138 ntBASIC3.07□□□□□ -1.92
RaraP11416 Gm16976-205ENSMUST00000227324 226 ntBASIC3.07□□□□□ -1.92
RaraP11416 Mir9-2-201ENSMUST00000083490 72 ntBASIC3.07□□□□□ -1.92
RaraP11416 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
RaraP11416 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.07□□□□□ -1.92
RaraP11416 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RaraP11416 Gm24632-201ENSMUST00000122770 323 ntBASIC3.06□□□□□ -1.92
RaraP11416 Gm25490-201ENSMUST00000158734 130 ntBASIC3.06□□□□□ -1.92
RaraP11416 Gm44491-201ENSMUST00000196794 96 ntBASIC3.06□□□□□ -1.92
RaraP11416 Gm44223-201ENSMUST00000204854 114 ntBASIC3.06□□□□□ -1.92
RaraP11416 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
RaraP11416 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.06□□□□□ -1.92
RaraP11416 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RaraP11416 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RaraP11416 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RaraP11416 Mir1195-201ENSMUST00000116818 98 ntBASIC3.05□□□□□ -1.92
RaraP11416 Gm15272-201ENSMUST00000120865 233 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 220.1 ms