Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.44□□□□□ -2.18
NefmP08553 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
NefmP08553 Gm27894-201ENSMUST00000184177 92 ntBASIC1.44□□□□□ -2.18
NefmP08553 Gm44419-201ENSMUST00000203338 229 ntBASIC1.44□□□□□ -2.18
NefmP08553 Gm22306-201ENSMUST00000082692 107 ntBASIC1.44□□□□□ -2.18
NefmP08553 Gm25578-201ENSMUST00000083406 104 ntBASIC1.44□□□□□ -2.18
NefmP08553 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.43□□□□□ -2.18
NefmP08553 Gm25781-201ENSMUST00000122527 84 ntBASIC1.43□□□□□ -2.18
NefmP08553 Gm28661-201ENSMUST00000188231 681 ntBASIC1.43□□□□□ -2.18
NefmP08553 Gm29014-201ENSMUST00000191422 326 ntBASIC1.43□□□□□ -2.18
NefmP08553 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.43□□□□□ -2.18
NefmP08553 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.43□□□□□ -2.18
NefmP08553 Gm26224-201ENSMUST00000082506 80 ntBASIC1.43□□□□□ -2.18
NefmP08553 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.42□□□□□ -2.18
NefmP08553 Gm12647-201ENSMUST00000118977 265 ntBASIC1.42□□□□□ -2.18
NefmP08553 Gm24440-201ENSMUST00000157236 63 ntBASIC1.42□□□□□ -2.18
NefmP08553 Gm22233-201ENSMUST00000157464 114 ntBASIC1.42□□□□□ -2.18
NefmP08553 Gm25868-201ENSMUST00000158253 114 ntBASIC1.42□□□□□ -2.18
NefmP08553 Gm23262-201ENSMUST00000158323 168 ntBASIC1.42□□□□□ -2.18
NefmP08553 Gm24512-201ENSMUST00000174963 65 ntBASIC1.42□□□□□ -2.18
NefmP08553 Gm23636-201ENSMUST00000175070 95 ntBASIC1.42□□□□□ -2.18
NefmP08553 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.42□□□□□ -2.18
NefmP08553 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.42□□□□□ -2.18
NefmP08553 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.42□□□□□ -2.18
NefmP08553 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.42□□□□□ -2.18
NefmP08553 Gm22883-201ENSMUST00000157376 106 ntBASIC1.41□□□□□ -2.18
NefmP08553 Gm25663-201ENSMUST00000157698 135 ntBASIC1.41□□□□□ -2.18
NefmP08553 Gm25166-201ENSMUST00000158909 111 ntBASIC1.41□□□□□ -2.18
NefmP08553 Gm28344-201ENSMUST00000185704 279 ntBASIC1.41□□□□□ -2.18
NefmP08553 Gm26135-201ENSMUST00000101993 72 ntBASIC1.4□□□□□ -2.19
NefmP08553 Gm15002-201ENSMUST00000118406 452 ntBASIC1.4□□□□□ -2.19
NefmP08553 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.4□□□□□ -2.19
NefmP08553 Gm24154-201ENSMUST00000175261 130 ntBASIC1.4□□□□□ -2.19
NefmP08553 Snord50b-201ENSMUST00000178497 72 ntBASIC1.4□□□□□ -2.19
NefmP08553 Mir376a-201ENSMUST00000197584 68 ntBASIC1.4□□□□□ -2.19
NefmP08553 Snora41-201ENSMUST00000082668 132 ntBASIC1.4□□□□□ -2.19
NefmP08553 Gm26111-201ENSMUST00000083969 106 ntBASIC1.4□□□□□ -2.19
NefmP08553 Gm23705-201ENSMUST00000104370 130 ntBASIC1.39□□□□□ -2.19
NefmP08553 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.39□□□□□ -2.19
NefmP08553 Gm42855-201ENSMUST00000197388 253 ntBASIC1.39□□□□□ -2.19
NefmP08553 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.39□□□□□ -2.19
NefmP08553 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.39□□□□□ -2.19
NefmP08553 Gm24042-201ENSMUST00000083114 103 ntBASIC1.39□□□□□ -2.19
NefmP08553 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.39□□□□□ -2.19
NefmP08553 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
NefmP08553 Gm24271-201ENSMUST00000102327 111 ntBASIC1.38□□□□□ -2.19
NefmP08553 Mir767-201ENSMUST00000103256 107 ntBASIC1.38□□□□□ -2.19
NefmP08553 Gm26082-201ENSMUST00000104070 127 ntBASIC1.38□□□□□ -2.19
NefmP08553 Gm23106-201ENSMUST00000157554 101 ntBASIC1.38□□□□□ -2.19
NefmP08553 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.38□□□□□ -2.19
NefmP08553 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.38□□□□□ -2.19
NefmP08553 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.38□□□□□ -2.19
NefmP08553 Gm10264-201ENSMUST00000220589 429 ntBASIC1.38□□□□□ -2.19
NefmP08553 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.38□□□□□ -2.19
NefmP08553 Gm23299-201ENSMUST00000082708 79 ntBASIC1.38□□□□□ -2.19
NefmP08553 Gm25204-201ENSMUST00000082843 106 ntBASIC1.38□□□□□ -2.19
NefmP08553 Gm23412-201ENSMUST00000083017 107 ntBASIC1.38□□□□□ -2.19
NefmP08553 Mir410-201ENSMUST00000083563 81 ntBASIC1.38□□□□□ -2.19
NefmP08553 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
NefmP08553 Gm23329-201ENSMUST00000157415 108 ntBASIC1.37□□□□□ -2.19
NefmP08553 Mir6240-201ENSMUST00000184281 117 ntBASIC1.37□□□□□ -2.19
NefmP08553 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
NefmP08553 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.37□□□□□ -2.19
NefmP08553 Gm43884-201ENSMUST00000204251 559 ntBASIC1.37□□□□□ -2.19
NefmP08553 Gm22545-201ENSMUST00000104350 132 ntBASIC1.36□□□□□ -2.19
NefmP08553 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
NefmP08553 Gm22228-201ENSMUST00000157364 101 ntBASIC1.36□□□□□ -2.19
NefmP08553 Gm22814-201ENSMUST00000157452 104 ntBASIC1.36□□□□□ -2.19
NefmP08553 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.36□□□□□ -2.19
NefmP08553 Gm44325-201ENSMUST00000196757 77 ntBASIC1.36□□□□□ -2.19
NefmP08553 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.36□□□□□ -2.19
NefmP08553 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.36□□□□□ -2.19
NefmP08553 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.36□□□□□ -2.19
NefmP08553 Gm22021-201ENSMUST00000104353 107 ntBASIC1.35□□□□□ -2.19
NefmP08553 Gm24629-201ENSMUST00000122762 89 ntBASIC1.35□□□□□ -2.19
NefmP08553 Gm24847-201ENSMUST00000158032 108 ntBASIC1.35□□□□□ -2.19
NefmP08553 Gm44063-201ENSMUST00000203307 376 ntBASIC1.35□□□□□ -2.19
NefmP08553 Gm25697-201ENSMUST00000082902 98 ntBASIC1.35□□□□□ -2.19
NefmP08553 Snord35a-201ENSMUST00000083884 90 ntBASIC1.35□□□□□ -2.19
NefmP08553 Gm25683-201ENSMUST00000083940 131 ntBASIC1.35□□□□□ -2.19
NefmP08553 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
NefmP08553 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.34□□□□□ -2.19
NefmP08553 Gm26255-201ENSMUST00000122492 103 ntBASIC1.34□□□□□ -2.19
NefmP08553 Gm23893-201ENSMUST00000158106 134 ntBASIC1.34□□□□□ -2.19
NefmP08553 Mir7059-201ENSMUST00000184825 59 ntBASIC1.34□□□□□ -2.19
NefmP08553 Gm37845-201ENSMUST00000194977 355 ntBASIC1.34□□□□□ -2.19
NefmP08553 Gm44352-201ENSMUST00000196358 110 ntBASIC1.34□□□□□ -2.19
NefmP08553 Gm9795-201ENSMUST00000062156 693 ntBASIC1.34□□□□□ -2.19
NefmP08553 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
NefmP08553 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
NefmP08553 Gm22032-201ENSMUST00000116946 116 ntBASIC1.33□□□□□ -2.2
NefmP08553 Gm26022-201ENSMUST00000158663 108 ntBASIC1.33□□□□□ -2.2
NefmP08553 Mir3535-201ENSMUST00000197651 147 ntBASIC1.33□□□□□ -2.2
NefmP08553 Gm22704-201ENSMUST00000083027 137 ntBASIC1.33□□□□□ -2.2
NefmP08553 Gm23492-201ENSMUST00000116837 115 ntBASIC1.32□□□□□ -2.2
NefmP08553 Gm14491-201ENSMUST00000121919 199 ntBASIC1.32□□□□□ -2.2
NefmP08553 Mir1951-201ENSMUST00000157981 89 ntBASIC1.32□□□□□ -2.2
NefmP08553 Gm25768-201ENSMUST00000158570 98 ntBASIC1.32□□□□□ -2.2
NefmP08553 Gm25750-201ENSMUST00000175483 112 ntBASIC1.32□□□□□ -2.2
NefmP08553 Gm24020-201ENSMUST00000180156 108 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 362.4 ms