Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Gm25910-201ENSMUST00000157620 140 ntBASIC2.53□□□□□ -2
Pcdha4O88689 Gm20438-201ENSMUST00000174441 329 ntBASIC2.53□□□□□ -2
Pcdha4O88689 Gm29603-201ENSMUST00000186792 334 ntBASIC2.53□□□□□ -2
Pcdha4O88689 Gm43722-201ENSMUST00000196054 124 ntBASIC2.53□□□□□ -2
Pcdha4O88689 Gm45456-201ENSMUST00000210841 243 ntBASIC2.53□□□□□ -2
Pcdha4O88689 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.53□□□□□ -2
Pcdha4O88689 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.53□□□□□ -2
Pcdha4O88689 Gm22686-201ENSMUST00000082847 100 ntBASIC2.53□□□□□ -2
Pcdha4O88689 Mir186-201ENSMUST00000083497 71 ntBASIC2.53□□□□□ -2
Pcdha4O88689 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.53□□□□□ -2
Pcdha4O88689 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Pcdha4O88689 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.53□□□□□ -2
Pcdha4O88689 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Pcdha4O88689 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Pcdha4O88689 Mir542-201ENSMUST00000102186 85 ntBASIC2.52□□□□□ -2.01
Pcdha4O88689 Gm22349-201ENSMUST00000157864 107 ntBASIC2.52□□□□□ -2.01
Pcdha4O88689 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.52□□□□□ -2.01
Pcdha4O88689 Gm42807-201ENSMUST00000200141 329 ntBASIC2.52□□□□□ -2.01
Pcdha4O88689 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.52□□□□□ -2.01
Pcdha4O88689 Mir29c-201ENSMUST00000083614 88 ntBASIC2.52□□□□□ -2.01
Pcdha4O88689 Gm22828-201ENSMUST00000083768 107 ntBASIC2.52□□□□□ -2.01
Pcdha4O88689 Gm10351-201ENSMUST00000087694 125 ntBASIC2.52□□□□□ -2.01
Pcdha4O88689 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Pcdha4O88689 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Pcdha4O88689 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm23320-201ENSMUST00000104462 127 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm22373-201ENSMUST00000104584 89 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm14536-201ENSMUST00000118324 138 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm15027-201ENSMUST00000120922 138 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm26280-201ENSMUST00000157096 101 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm23665-201ENSMUST00000158054 62 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm23337-201ENSMUST00000158959 118 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm26160-201ENSMUST00000158965 63 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm24510-201ENSMUST00000174965 94 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm23963-201ENSMUST00000179603 77 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Mir6376-201ENSMUST00000185149 131 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm24661-201ENSMUST00000083205 104 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm25136-201ENSMUST00000083253 115 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.51□□□□□ -2.01
Pcdha4O88689 Gm22486-201ENSMUST00000116815 137 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm22477-201ENSMUST00000122569 316 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm2830-201ENSMUST00000140330 385 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm26049-201ENSMUST00000157313 108 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm23718-201ENSMUST00000157350 307 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm24475-201ENSMUST00000157435 143 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm24769-201ENSMUST00000158506 129 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm27399-201ENSMUST00000184250 78 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm37377-201ENSMUST00000191733 304 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm18546-201ENSMUST00000197245 676 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm43587-201ENSMUST00000199590 204 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm44052-201ENSMUST00000203382 396 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.5□□□□□ -2.01
Pcdha4O88689 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Pcdha4O88689 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Pcdha4O88689 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.49□□□□□ -2.01
Pcdha4O88689 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Pcdha4O88689 Mir669b-201ENSMUST00000102172 97 ntBASIC2.49□□□□□ -2.01
Pcdha4O88689 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.49□□□□□ -2.01
Pcdha4O88689 Mir497-201ENSMUST00000200557 84 ntBASIC2.49□□□□□ -2.01
Pcdha4O88689 Gm45386-201ENSMUST00000210194 218 ntBASIC2.49□□□□□ -2.01
Pcdha4O88689 Gm24313-201ENSMUST00000082561 133 ntBASIC2.49□□□□□ -2.01
Pcdha4O88689 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.49□□□□□ -2.01
Pcdha4O88689 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.49□□□□□ -2.01
Pcdha4O88689 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Pcdha4O88689 Gm24900-201ENSMUST00000158128 134 ntBASIC2.48□□□□□ -2.01
Pcdha4O88689 Gm27878-201ENSMUST00000184000 106 ntBASIC2.48□□□□□ -2.01
Pcdha4O88689 Trbv7-201ENSMUST00000193339 402 ntBASIC2.48□□□□□ -2.01
Pcdha4O88689 Mir3069-201ENSMUST00000198802 65 ntBASIC2.48□□□□□ -2.01
Pcdha4O88689 Gm44477-201ENSMUST00000199661 110 ntBASIC2.48□□□□□ -2.01
Pcdha4O88689 Gm23138-201ENSMUST00000083365 103 ntBASIC2.48□□□□□ -2.01
Pcdha4O88689 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Pcdha4O88689 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Pcdha4O88689 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Pcdha4O88689 Gm26342-201ENSMUST00000104557 129 ntBASIC2.47□□□□□ -2.01
Pcdha4O88689 Gm22151-201ENSMUST00000116963 58 ntBASIC2.47□□□□□ -2.01
Pcdha4O88689 Gm23983-201ENSMUST00000157142 114 ntBASIC2.47□□□□□ -2.01
Pcdha4O88689 Gm22947-201ENSMUST00000158559 91 ntBASIC2.47□□□□□ -2.01
Pcdha4O88689 Mir7068-201ENSMUST00000183439 74 ntBASIC2.47□□□□□ -2.01
Pcdha4O88689 Gm9251-201ENSMUST00000197202 628 ntBASIC2.47□□□□□ -2.01
Pcdha4O88689 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Pcdha4O88689 Gm22850-201ENSMUST00000157714 82 ntBASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm24358-201ENSMUST00000158424 288 ntBASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm25491-201ENSMUST00000158733 308 ntBASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm24813-201ENSMUST00000175310 84 ntBASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm28409-201ENSMUST00000187064 103 ntBASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm28912-201ENSMUST00000189001 234 ntBASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm21064-202ENSMUST00000190583 278 ntBASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm44326-201ENSMUST00000198226 101 ntBASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm24698-201ENSMUST00000083883 130 ntBASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm23947-201ENSMUST00000093636 107 ntBASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Pcdha4O88689 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Pcdha4O88689 Gm24049-201ENSMUST00000102409 100 ntBASIC2.45□□□□□ -2.02
Pcdha4O88689 Gm22731-201ENSMUST00000158086 94 ntBASIC2.45□□□□□ -2.02
Pcdha4O88689 Gm22093-201ENSMUST00000158980 111 ntBASIC2.45□□□□□ -2.02
Pcdha4O88689 Gm28169-201ENSMUST00000190342 345 ntBASIC2.45□□□□□ -2.02
Pcdha4O88689 Gm6109-201ENSMUST00000223297 348 ntBASIC2.45□□□□□ -2.02
Pcdha4O88689 Gm24410-201ENSMUST00000083433 107 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 266 ms