Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.42□□□□□ -2.64
Ccdc180J3QNE4 Gm22966-201ENSMUST00000157957 129 ntBASIC-1.42□□□□□ -2.64
Ccdc180J3QNE4 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-1.42□□□□□ -2.64
Ccdc180J3QNE4 AC130821.1-201ENSMUST00000221997 293 ntBASIC-1.42□□□□□ -2.64
Ccdc180J3QNE4 Gm5899-201ENSMUST00000071770 270 ntBASIC-1.42□□□□□ -2.64
Ccdc180J3QNE4 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.43□□□□□ -2.64
Ccdc180J3QNE4 Gm22887-201ENSMUST00000178586 107 ntBASIC-1.43□□□□□ -2.64
Ccdc180J3QNE4 Gm44487-201ENSMUST00000205145 325 ntBASIC-1.43□□□□□ -2.64
Ccdc180J3QNE4 AC154282.1-201ENSMUST00000223154 265 ntBASIC-1.43□□□□□ -2.64
Ccdc180J3QNE4 Gm23042-201ENSMUST00000083866 101 ntBASIC-1.43□□□□□ -2.64
Ccdc180J3QNE4 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC-1.44□□□□□ -2.64
Ccdc180J3QNE4 Gm12779-201ENSMUST00000121496 143 ntBASIC-1.44□□□□□ -2.64
Ccdc180J3QNE4 Gm24382-201ENSMUST00000122698 107 ntBASIC-1.44□□□□□ -2.64
Ccdc180J3QNE4 Gm26359-201ENSMUST00000158873 101 ntBASIC-1.44□□□□□ -2.64
Ccdc180J3QNE4 Gm24510-201ENSMUST00000174965 94 ntBASIC-1.44□□□□□ -2.64
Ccdc180J3QNE4 Gm24276-201ENSMUST00000102181 110 ntBASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 Gm11386-201ENSMUST00000117761 347 ntBASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 Gm15529-201ENSMUST00000121833 994 ntBASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 Gm25126-201ENSMUST00000083343 102 ntBASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 Gm12045-201ENSMUST00000122122 573 ntBASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 Gm11254-201ENSMUST00000122368 653 ntBASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 Gm23996-201ENSMUST00000158062 131 ntBASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 Gm21726-201ENSMUST00000179654 392 ntBASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 Mir721-201ENSMUST00000200230 88 ntBASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-1.45□□□□□ -2.64
Ccdc180J3QNE4 Gm24375-201ENSMUST00000104397 132 ntBASIC-1.46□□□□□ -2.64
Ccdc180J3QNE4 Gm11575-201ENSMUST00000122243 228 ntBASIC-1.46□□□□□ -2.64
Ccdc180J3QNE4 Gm25884-201ENSMUST00000157782 62 ntBASIC-1.46□□□□□ -2.64
Ccdc180J3QNE4 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-1.46□□□□□ -2.64
Ccdc180J3QNE4 Gm27428-201ENSMUST00000184289 110 ntBASIC-1.46□□□□□ -2.64
Ccdc180J3QNE4 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-1.46□□□□□ -2.64
Ccdc180J3QNE4 Gm22753-201ENSMUST00000083657 107 ntBASIC-1.46□□□□□ -2.64
Ccdc180J3QNE4 Gm8858-201ENSMUST00000118259 342 ntBASIC-1.47□□□□□ -2.64
Ccdc180J3QNE4 Gm22776-201ENSMUST00000178634 94 ntBASIC-1.47□□□□□ -2.64
Ccdc180J3QNE4 Gm23767-201ENSMUST00000179278 94 ntBASIC-1.47□□□□□ -2.64
Ccdc180J3QNE4 Gm27236-201ENSMUST00000184147 442 ntBASIC-1.47□□□□□ -2.64
Ccdc180J3QNE4 Gm28740-201ENSMUST00000186142 215 ntBASIC-1.47□□□□□ -2.64
Ccdc180J3QNE4 AC140477.1-201ENSMUST00000222354 246 ntBASIC-1.47□□□□□ -2.64
Ccdc180J3QNE4 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.47□□□□□ -2.64
Ccdc180J3QNE4 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 Gm25015-201ENSMUST00000158400 128 ntBASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 Gm22509-201ENSMUST00000082775 107 ntBASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 Gm22743-201ENSMUST00000083445 133 ntBASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 Gm22886-201ENSMUST00000093714 107 ntBASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 Mir3964-201ENSMUST00000174898 74 ntBASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 Mir7651-201ENSMUST00000184154 64 ntBASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.48□□□□□ -2.65
Ccdc180J3QNE4 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC-1.49□□□□□ -2.65
Ccdc180J3QNE4 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-1.5□□□□□ -2.65
Ccdc180J3QNE4 Gm26233-201ENSMUST00000175530 70 ntBASIC-1.5□□□□□ -2.65
Ccdc180J3QNE4 Gm44125-201ENSMUST00000203068 448 ntBASIC-1.5□□□□□ -2.65
Ccdc180J3QNE4 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.5□□□□□ -2.65
Ccdc180J3QNE4 Gm23184-201ENSMUST00000122594 131 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm26371-201ENSMUST00000157829 104 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Mir1936-201ENSMUST00000158699 93 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm23523-201ENSMUST00000180190 107 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm44327-201ENSMUST00000200068 117 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm44615-201ENSMUST00000206548 358 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm23301-201ENSMUST00000082713 65 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm23331-201ENSMUST00000157423 108 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm22767-201ENSMUST00000158365 165 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm16307-201ENSMUST00000161269 210 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm44468-201ENSMUST00000199516 105 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm26123-201ENSMUST00000083363 135 ntBASIC-1.51□□□□□ -2.65
Ccdc180J3QNE4 Gm27047-201ENSMUST00000183072 1819 ntBASIC-1.52□□□□□ -2.65
Ccdc180J3QNE4 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-1.52□□□□□ -2.65
Ccdc180J3QNE4 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC-1.52□□□□□ -2.65
Ccdc180J3QNE4 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC-1.52□□□□□ -2.65
Ccdc180J3QNE4 Gm25878-201ENSMUST00000104327 93 ntBASIC-1.53□□□□□ -2.65
Ccdc180J3QNE4 Gm9059-201ENSMUST00000118319 183 ntBASIC-1.53□□□□□ -2.65
Ccdc180J3QNE4 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.53□□□□□ -2.65
Ccdc180J3QNE4 Gm26291-201ENSMUST00000158889 137 ntBASIC-1.53□□□□□ -2.65
Ccdc180J3QNE4 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC-1.53□□□□□ -2.65
Ccdc180J3QNE4 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC-1.53□□□□□ -2.65
Ccdc180J3QNE4 Gm24929-201ENSMUST00000083403 139 ntBASIC-1.53□□□□□ -2.65
Ccdc180J3QNE4 Mir687-201ENSMUST00000102166 89 ntBASIC-1.54□□□□□ -2.66
Ccdc180J3QNE4 Gm24233-201ENSMUST00000104317 122 ntBASIC-1.54□□□□□ -2.66
Ccdc180J3QNE4 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC-1.54□□□□□ -2.66
Ccdc180J3QNE4 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC-1.54□□□□□ -2.66
Ccdc180J3QNE4 Gm26249-201ENSMUST00000116708 118 ntBASIC-1.54□□□□□ -2.66
Ccdc180J3QNE4 Gm15030-201ENSMUST00000119804 484 ntBASIC-1.54□□□□□ -2.66
Ccdc180J3QNE4 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-1.54□□□□□ -2.66
Ccdc180J3QNE4 Gm23196-201ENSMUST00000158806 107 ntBASIC-1.54□□□□□ -2.66
Ccdc180J3QNE4 Gm31849-201ENSMUST00000220306 375 ntBASIC-1.54□□□□□ -2.66
Ccdc180J3QNE4 Mir377-201ENSMUST00000083504 68 ntBASIC-1.54□□□□□ -2.66
Ccdc180J3QNE4 Gm14551-201ENSMUST00000120802 256 ntBASIC-1.55□□□□□ -2.66
Ccdc180J3QNE4 Gm23898-201ENSMUST00000158111 103 ntBASIC-1.55□□□□□ -2.66
Ccdc180J3QNE4 Gm26238-201ENSMUST00000175538 117 ntBASIC-1.55□□□□□ -2.66
Ccdc180J3QNE4 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-1.55□□□□□ -2.66
Ccdc180J3QNE4 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.55□□□□□ -2.66
Ccdc180J3QNE4 Gm23584-201ENSMUST00000157655 129 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 76,532 protein–RNA pairs in 271.2 ms