Protein–RNA interactions for Protein: Q9JLI2

Col5a3, Collagen type V alpha 3 chain, mousemouse

Predictions only

Length 1,739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a3Q9JLI2 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.72□□□□□ -2.29
Col5a3Q9JLI2 Snord35a-201ENSMUST00000083884 90 ntBASIC0.72□□□□□ -2.29
Col5a3Q9JLI2 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.72□□□□□ -2.29
Col5a3Q9JLI2 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Col5a3Q9JLI2 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.72□□□□□ -2.29
Col5a3Q9JLI2 Gm22757-201ENSMUST00000102279 96 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Gm25543-201ENSMUST00000122678 312 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Gm25371-201ENSMUST00000158162 101 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Gm23339-201ENSMUST00000158962 139 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Gm25284-201ENSMUST00000180345 141 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Mir6896-201ENSMUST00000198033 73 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Gm43220-201ENSMUST00000199299 282 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Gm45403-201ENSMUST00000209453 276 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Gm45907-201ENSMUST00000213023 193 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Gm24625-201ENSMUST00000082622 130 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Gm23731-201ENSMUST00000083749 107 ntBASIC0.71□□□□□ -2.3
Col5a3Q9JLI2 Gm23142-201ENSMUST00000101848 105 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm26240-201ENSMUST00000101893 105 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm22032-201ENSMUST00000116946 116 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm14803-201ENSMUST00000117163 361 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm13992-201ENSMUST00000120558 156 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm15861-201ENSMUST00000120979 339 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm6025-201ENSMUST00000121517 201 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm25970-201ENSMUST00000157165 86 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm22598-201ENSMUST00000157600 127 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm23793-201ENSMUST00000179396 117 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm25253-201ENSMUST00000179958 107 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm28927-201ENSMUST00000191528 272 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm37845-201ENSMUST00000194977 355 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm43250-201ENSMUST00000196536 273 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm30155-201ENSMUST00000223458 339 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Snord42a-201ENSMUST00000082606 65 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm24356-201ENSMUST00000082859 106 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Rny3-201ENSMUST00000083011 102 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm25128-201ENSMUST00000083339 76 ntBASIC0.7□□□□□ -2.3
Col5a3Q9JLI2 Gm42606-201ENSMUST00000114209 239 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm13729-201ENSMUST00000120328 406 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm13967-201ENSMUST00000120404 380 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm14574-201ENSMUST00000120644 279 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm20477-201ENSMUST00000174028 280 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Mir6388-201ENSMUST00000184417 75 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm9156-201ENSMUST00000189660 463 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm23370-201ENSMUST00000199545 130 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm5023-201ENSMUST00000217442 587 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Mir340-201ENSMUST00000083483 98 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm26168-201ENSMUST00000083787 112 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm22365-201ENSMUST00000093750 117 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Mir1b-201ENSMUST00000117012 122 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm22281-201ENSMUST00000157198 103 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm22074-201ENSMUST00000158595 113 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Mir1936-201ENSMUST00000158699 93 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm26400-201ENSMUST00000175012 85 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm24308-201ENSMUST00000177773 114 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm27793-201ENSMUST00000183405 76 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm27410-201ENSMUST00000183851 115 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Mir7093-201ENSMUST00000184195 101 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm27517-201ENSMUST00000184347 236 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm28414-201ENSMUST00000190111 294 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm28211-201ENSMUST00000190920 315 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm38050-201ENSMUST00000191904 238 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm36946-201ENSMUST00000192706 435 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm44149-201ENSMUST00000204256 226 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm10092-201ENSMUST00000077110 180 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Gm25929-201ENSMUST00000082784 107 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.69□□□□□ -2.3
Col5a3Q9JLI2 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Col5a3Q9JLI2 Gm22027-201ENSMUST00000122737 127 ntBASIC0.68□□□□□ -2.3
Col5a3Q9JLI2 Gm25805-201ENSMUST00000122788 108 ntBASIC0.68□□□□□ -2.3
Col5a3Q9JLI2 Gm24851-201ENSMUST00000158028 103 ntBASIC0.68□□□□□ -2.3
Col5a3Q9JLI2 Gm26405-201ENSMUST00000158495 100 ntBASIC0.68□□□□□ -2.3
Col5a3Q9JLI2 Gm26213-201ENSMUST00000158582 110 ntBASIC0.68□□□□□ -2.3
Col5a3Q9JLI2 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 161.2 ms