Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm43521-201ENSMUST00000197838 255 ntBASIC2.54□□□□□ -2
Rnft1Q9DCN7 Gm43381-201ENSMUST00000198553 165 ntBASIC2.54□□□□□ -2
Rnft1Q9DCN7 Gm43107-201ENSMUST00000198729 255 ntBASIC2.54□□□□□ -2
Rnft1Q9DCN7 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.54□□□□□ -2
Rnft1Q9DCN7 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.54□□□□□ -2
Rnft1Q9DCN7 Gm10025-201ENSMUST00000079568 372 ntBASIC2.54□□□□□ -2
Rnft1Q9DCN7 Gm22972-201ENSMUST00000083297 131 ntBASIC2.54□□□□□ -2
Rnft1Q9DCN7 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.54□□□□□ -2
Rnft1Q9DCN7 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Rnft1Q9DCN7 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Rnft1Q9DCN7 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.54□□□□□ -2
Rnft1Q9DCN7 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.53□□□□□ -2
Rnft1Q9DCN7 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Rnft1Q9DCN7 Gm13913-201ENSMUST00000121126 260 ntBASIC2.53□□□□□ -2
Rnft1Q9DCN7 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.53□□□□□ -2
Rnft1Q9DCN7 Gm24291-201ENSMUST00000157633 162 ntBASIC2.53□□□□□ -2
Rnft1Q9DCN7 Gm25373-201ENSMUST00000158156 115 ntBASIC2.53□□□□□ -2
Rnft1Q9DCN7 Gm22612-201ENSMUST00000158293 101 ntBASIC2.53□□□□□ -2
Rnft1Q9DCN7 Gm23504-201ENSMUST00000158988 95 ntBASIC2.53□□□□□ -2
Rnft1Q9DCN7 Gm6788-201ENSMUST00000166459 270 ntBASIC2.53□□□□□ -2
Rnft1Q9DCN7 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.53□□□□□ -2
Rnft1Q9DCN7 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.53□□□□□ -2
Rnft1Q9DCN7 Gm9370-201ENSMUST00000222787 609 ntBASIC2.53□□□□□ -2
Rnft1Q9DCN7 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.53□□□□□ -2
Rnft1Q9DCN7 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Rnft1Q9DCN7 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Rnft1Q9DCN7 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
Rnft1Q9DCN7 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.53□□□□□ -2.01
Rnft1Q9DCN7 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Gm15214-201ENSMUST00000122155 470 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Gm23470-201ENSMUST00000157129 120 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Gm22141-201ENSMUST00000157403 277 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Gm25882-201ENSMUST00000157784 85 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Gm23223-201ENSMUST00000158119 127 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Gm26215-201ENSMUST00000158584 139 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Gm24350-202ENSMUST00000198309 132 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Mir1291-201ENSMUST00000199842 117 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Snora34-201ENSMUST00000083402 138 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Rnft1Q9DCN7 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm26081-201ENSMUST00000104068 132 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Mir28b-201ENSMUST00000175399 80 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm25380-201ENSMUST00000175463 107 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm24641-201ENSMUST00000178055 107 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm25484-201ENSMUST00000178217 107 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm26138-201ENSMUST00000179236 107 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm22821-201ENSMUST00000179288 107 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm18546-201ENSMUST00000197245 676 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Mir7118-201ENSMUST00000197760 61 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm23140-201ENSMUST00000082487 107 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm23298-201ENSMUST00000083181 107 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm24614-201ENSMUST00000083269 107 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm22057-201ENSMUST00000083387 107 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm22576-201ENSMUST00000083733 104 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm25006-201ENSMUST00000083813 107 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm25516-201ENSMUST00000083857 107 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm24030-201ENSMUST00000083931 164 ntBASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Rnft1Q9DCN7 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.5□□□□□ -2.01
Rnft1Q9DCN7 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.5□□□□□ -2.01
Rnft1Q9DCN7 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.5□□□□□ -2.01
Rnft1Q9DCN7 Gm22105-201ENSMUST00000116734 116 ntBASIC2.5□□□□□ -2.01
Rnft1Q9DCN7 Gm23600-201ENSMUST00000157260 71 ntBASIC2.5□□□□□ -2.01
Rnft1Q9DCN7 Gm44976-201ENSMUST00000205543 261 ntBASIC2.5□□□□□ -2.01
Rnft1Q9DCN7 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.5□□□□□ -2.01
Rnft1Q9DCN7 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.5□□□□□ -2.01
Rnft1Q9DCN7 Gm23615-201ENSMUST00000082602 65 ntBASIC2.5□□□□□ -2.01
Rnft1Q9DCN7 Gm23303-201ENSMUST00000082714 152 ntBASIC2.5□□□□□ -2.01
Rnft1Q9DCN7 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Rnft1Q9DCN7 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Gm24896-201ENSMUST00000122741 135 ntBASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Gm23980-201ENSMUST00000157135 158 ntBASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Gm25444-201ENSMUST00000158999 113 ntBASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Gm25646-201ENSMUST00000178527 79 ntBASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Mir6353-201ENSMUST00000183596 113 ntBASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Gm44256-201ENSMUST00000203304 335 ntBASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Gm43898-201ENSMUST00000204456 424 ntBASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Gm44478-201ENSMUST00000204875 114 ntBASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Gm23246-201ENSMUST00000083371 67 ntBASIC2.49□□□□□ -2.01
Rnft1Q9DCN7 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Rnft1Q9DCN7 Mir374b-201ENSMUST00000102314 95 ntBASIC2.48□□□□□ -2.01
Rnft1Q9DCN7 Snord64-201ENSMUST00000104003 67 ntBASIC2.48□□□□□ -2.01
Rnft1Q9DCN7 Gm15067-201ENSMUST00000119534 156 ntBASIC2.48□□□□□ -2.01
Rnft1Q9DCN7 Gm24595-201ENSMUST00000122501 110 ntBASIC2.48□□□□□ -2.01
Rnft1Q9DCN7 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.48□□□□□ -2.01
Rnft1Q9DCN7 Gm24634-201ENSMUST00000158672 107 ntBASIC2.48□□□□□ -2.01
Rnft1Q9DCN7 Gm25098-201ENSMUST00000177580 79 ntBASIC2.48□□□□□ -2.01
Rnft1Q9DCN7 Gm23356-201ENSMUST00000177610 79 ntBASIC2.48□□□□□ -2.01
Rnft1Q9DCN7 Gm24027-201ENSMUST00000177611 79 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 149.4 ms