Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Gm22664-201ENSMUST00000158719 105 ntBASIC2.18□□□□□ -2.06
Cthrc1Q9D1D6 Gm22011-201ENSMUST00000158790 123 ntBASIC2.18□□□□□ -2.06
Cthrc1Q9D1D6 Gm16561-201ENSMUST00000163001 192 ntBASIC2.18□□□□□ -2.06
Cthrc1Q9D1D6 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.18□□□□□ -2.06
Cthrc1Q9D1D6 Mir6925-201ENSMUST00000197857 70 ntBASIC2.18□□□□□ -2.06
Cthrc1Q9D1D6 Mir1a-2-201ENSMUST00000198520 72 ntBASIC2.18□□□□□ -2.06
Cthrc1Q9D1D6 Gm20734-201ENSMUST00000216939 193 ntBASIC2.18□□□□□ -2.06
Cthrc1Q9D1D6 Gm25142-201ENSMUST00000082698 107 ntBASIC2.18□□□□□ -2.06
Cthrc1Q9D1D6 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Cthrc1Q9D1D6 Gm22750-201ENSMUST00000102076 103 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm22075-201ENSMUST00000158599 192 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm25051-201ENSMUST00000158602 249 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm24837-201ENSMUST00000158683 81 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm16162-201ENSMUST00000162296 297 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm22510-201ENSMUST00000179304 79 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm26336-201ENSMUST00000179449 79 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm26390-201ENSMUST00000179628 79 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm37997-201ENSMUST00000193515 267 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm43199-201ENSMUST00000200019 307 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm18188-201ENSMUST00000219386 478 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm26204-201ENSMUST00000082906 107 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Mir302d-201ENSMUST00000083513 66 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Cthrc1Q9D1D6 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm25485-201ENSMUST00000104120 132 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm14652-201ENSMUST00000118479 235 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm24937-201ENSMUST00000122597 134 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm22227-201ENSMUST00000157356 259 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm23642-201ENSMUST00000157858 258 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm22731-201ENSMUST00000158086 94 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm25223-201ENSMUST00000158200 110 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm22666-201ENSMUST00000158717 164 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm25996-201ENSMUST00000175393 117 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm27285-201ENSMUST00000183875 127 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm27399-201ENSMUST00000184250 78 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Gm37557-201ENSMUST00000191640 139 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.16□□□□□ -2.06
Cthrc1Q9D1D6 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Cthrc1Q9D1D6 Gm16032-201ENSMUST00000118534 168 ntBASIC2.15□□□□□ -2.07
Cthrc1Q9D1D6 Gm26150-201ENSMUST00000157426 151 ntBASIC2.15□□□□□ -2.07
Cthrc1Q9D1D6 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.15□□□□□ -2.07
Cthrc1Q9D1D6 Mir3961-201ENSMUST00000198795 59 ntBASIC2.15□□□□□ -2.07
Cthrc1Q9D1D6 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
Cthrc1Q9D1D6 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.15□□□□□ -2.07
Cthrc1Q9D1D6 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Gm12449-201ENSMUST00000117572 234 ntBASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Gm14748-201ENSMUST00000119819 411 ntBASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Gm23469-201ENSMUST00000157131 104 ntBASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Gm26482-201ENSMUST00000158015 62 ntBASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Gm25267-201ENSMUST00000158522 63 ntBASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Gm27928-201ENSMUST00000183747 256 ntBASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Gm44477-201ENSMUST00000199661 110 ntBASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.14□□□□□ -2.07
Cthrc1Q9D1D6 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Cthrc1Q9D1D6 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.13□□□□□ -2.07
Cthrc1Q9D1D6 Snord89-201ENSMUST00000104516 110 ntBASIC2.13□□□□□ -2.07
Cthrc1Q9D1D6 Gm25371-201ENSMUST00000158162 101 ntBASIC2.13□□□□□ -2.07
Cthrc1Q9D1D6 Rnu7-201ENSMUST00000158458 62 ntBASIC2.13□□□□□ -2.07
Cthrc1Q9D1D6 Gm28344-201ENSMUST00000185704 279 ntBASIC2.13□□□□□ -2.07
Cthrc1Q9D1D6 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.13□□□□□ -2.07
Cthrc1Q9D1D6 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Cthrc1Q9D1D6 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Cthrc1Q9D1D6 Gm23551-201ENSMUST00000116852 121 ntBASIC2.12□□□□□ -2.07
Cthrc1Q9D1D6 Gm15214-201ENSMUST00000122155 470 ntBASIC2.12□□□□□ -2.07
Cthrc1Q9D1D6 Gm25914-201ENSMUST00000157618 153 ntBASIC2.12□□□□□ -2.07
Cthrc1Q9D1D6 Gm22517-201ENSMUST00000158265 136 ntBASIC2.12□□□□□ -2.07
Cthrc1Q9D1D6 Gm22989-201ENSMUST00000158313 86 ntBASIC2.12□□□□□ -2.07
Cthrc1Q9D1D6 Gm23005-201ENSMUST00000158950 136 ntBASIC2.12□□□□□ -2.07
Cthrc1Q9D1D6 Gm44491-201ENSMUST00000196794 96 ntBASIC2.12□□□□□ -2.07
Cthrc1Q9D1D6 Gm24762-201ENSMUST00000083689 104 ntBASIC2.12□□□□□ -2.07
Cthrc1Q9D1D6 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Cthrc1Q9D1D6 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm22494-201ENSMUST00000104495 128 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm13560-201ENSMUST00000121865 329 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm24595-201ENSMUST00000122501 110 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm22083-201ENSMUST00000157586 102 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm22337-201ENSMUST00000157721 132 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm24015-201ENSMUST00000157725 232 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm9156-201ENSMUST00000189660 463 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Mir721-201ENSMUST00000200230 88 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Mir497-201ENSMUST00000200557 84 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm36189-201ENSMUST00000204113 523 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm5002-201ENSMUST00000207145 223 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm46993-201ENSMUST00000220708 259 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm25130-201ENSMUST00000082650 156 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Snord118-201ENSMUST00000082965 135 ntBASIC2.11□□□□□ -2.07
Cthrc1Q9D1D6 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 179 ms