Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm22784-201ENSMUST00000104088 132 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Mir293-201ENSMUST00000104841 80 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Gm22217-201ENSMUST00000157556 313 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Mir1951-201ENSMUST00000157981 89 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Gm26022-201ENSMUST00000158663 108 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Gm23181-201ENSMUST00000158685 110 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Gm25024-201ENSMUST00000179667 104 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Gm27545-201ENSMUST00000184755 202 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Mir7021-201ENSMUST00000197026 63 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Gm44989-201ENSMUST00000204749 217 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Gm45150-201ENSMUST00000206051 467 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Gm18617-201ENSMUST00000222311 259 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Gm25357-201ENSMUST00000082745 72 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Gm25204-201ENSMUST00000082843 106 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Gm25513-201ENSMUST00000083861 162 ntBASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ddx28Q9CWT6 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ddx28Q9CWT6 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ddx28Q9CWT6 Gm23950-201ENSMUST00000104026 129 ntBASIC1.66□□□□□ -2.14
Ddx28Q9CWT6 Gm23182-201ENSMUST00000158688 135 ntBASIC1.66□□□□□ -2.14
Ddx28Q9CWT6 Gm26864-201ENSMUST00000181346 156 ntBASIC1.66□□□□□ -2.14
Ddx28Q9CWT6 Mir7017-201ENSMUST00000184894 62 ntBASIC1.66□□□□□ -2.14
Ddx28Q9CWT6 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Ddx28Q9CWT6 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 Gm23951-201ENSMUST00000104029 132 ntBASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 Gm14937-201ENSMUST00000119709 208 ntBASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 Gm14846-201ENSMUST00000121868 216 ntBASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 Gm22011-201ENSMUST00000158790 123 ntBASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 Gm17113-201ENSMUST00000170118 171 ntBASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 Gm25235-201ENSMUST00000179933 107 ntBASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.65□□□□□ -2.15
Ddx28Q9CWT6 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Mir669g-201ENSMUST00000116809 123 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm12797-201ENSMUST00000118645 273 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Mir1898-201ENSMUST00000122643 83 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm23172-201ENSMUST00000157160 124 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm22097-201ENSMUST00000157929 278 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm25718-201ENSMUST00000158632 118 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm5900-201ENSMUST00000179862 375 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Mir7678-201ENSMUST00000185076 71 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm29308-201ENSMUST00000188863 315 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm43512-201ENSMUST00000198495 176 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm23370-201ENSMUST00000199545 130 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm6105-201ENSMUST00000200580 624 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm24042-201ENSMUST00000083114 103 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm25141-201ENSMUST00000083177 107 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Mir155-201ENSMUST00000083463 65 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.64□□□□□ -2.15
Ddx28Q9CWT6 Gm23109-201ENSMUST00000116867 126 ntBASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Gm11936-201ENSMUST00000118323 160 ntBASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Gm23219-201ENSMUST00000158123 87 ntBASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Gm24177-201ENSMUST00000158927 131 ntBASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Gm25730-201ENSMUST00000178753 165 ntBASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Gm22951-201ENSMUST00000179471 107 ntBASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Mir6336-201ENSMUST00000183581 130 ntBASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Mir7241-201ENSMUST00000184532 64 ntBASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Gm44409-201ENSMUST00000198810 166 ntBASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Snora3-201ENSMUST00000083082 132 ntBASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
Ddx28Q9CWT6 Gm26156-201ENSMUST00000116999 123 ntBASIC1.62□□□□□ -2.15
Ddx28Q9CWT6 Gm14837-201ENSMUST00000119688 206 ntBASIC1.62□□□□□ -2.15
Ddx28Q9CWT6 Gm23656-201ENSMUST00000122626 112 ntBASIC1.62□□□□□ -2.15
Ddx28Q9CWT6 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.62□□□□□ -2.15
Ddx28Q9CWT6 Gm23718-201ENSMUST00000157350 307 ntBASIC1.62□□□□□ -2.15
Ddx28Q9CWT6 Gm25836-201ENSMUST00000158918 123 ntBASIC1.62□□□□□ -2.15
Ddx28Q9CWT6 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.62□□□□□ -2.15
Ddx28Q9CWT6 Gm23002-201ENSMUST00000179221 107 ntBASIC1.62□□□□□ -2.15
Ddx28Q9CWT6 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.62□□□□□ -2.15
Ddx28Q9CWT6 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ddx28Q9CWT6 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ddx28Q9CWT6 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Ddx28Q9CWT6 Gm25914-201ENSMUST00000157618 153 ntBASIC1.61□□□□□ -2.15
Ddx28Q9CWT6 Gm27265-201ENSMUST00000183559 77 ntBASIC1.61□□□□□ -2.15
Ddx28Q9CWT6 Gm43563-201ENSMUST00000196761 198 ntBASIC1.61□□□□□ -2.15
Ddx28Q9CWT6 Mir6375-201ENSMUST00000197176 95 ntBASIC1.61□□□□□ -2.15
Ddx28Q9CWT6 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.61□□□□□ -2.15
Ddx28Q9CWT6 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.61□□□□□ -2.15
Ddx28Q9CWT6 Snora19-201ENSMUST00000082962 132 ntBASIC1.61□□□□□ -2.15
Ddx28Q9CWT6 Gm23658-201ENSMUST00000083233 132 ntBASIC1.61□□□□□ -2.15
Ddx28Q9CWT6 Gm23100-201ENSMUST00000083455 141 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 144 ms