Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm28506-201ENSMUST00000189937 150 ntBASIC0.41□□□□□ -2.34
Rpa3Q9CQ71 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.41□□□□□ -2.34
Rpa3Q9CQ71 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.41□□□□□ -2.34
Rpa3Q9CQ71 Gm25697-201ENSMUST00000082902 98 ntBASIC0.41□□□□□ -2.34
Rpa3Q9CQ71 Mir490-201ENSMUST00000093567 84 ntBASIC0.41□□□□□ -2.34
Rpa3Q9CQ71 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Rpa3Q9CQ71 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Rpa3Q9CQ71 Gm14846-201ENSMUST00000121868 216 ntBASIC0.4□□□□□ -2.35
Rpa3Q9CQ71 Mir6985-201ENSMUST00000184641 61 ntBASIC0.4□□□□□ -2.35
Rpa3Q9CQ71 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.4□□□□□ -2.35
Rpa3Q9CQ71 Gm23515-201ENSMUST00000082829 107 ntBASIC0.4□□□□□ -2.35
Rpa3Q9CQ71 Snord98-201ENSMUST00000116819 65 ntBASIC0.39□□□□□ -2.35
Rpa3Q9CQ71 Gm14884-201ENSMUST00000120456 196 ntBASIC0.39□□□□□ -2.35
Rpa3Q9CQ71 Gm27365-201ENSMUST00000184041 177 ntBASIC0.39□□□□□ -2.35
Rpa3Q9CQ71 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.39□□□□□ -2.35
Rpa3Q9CQ71 Gm5001-201ENSMUST00000204361 331 ntBASIC0.39□□□□□ -2.35
Rpa3Q9CQ71 Gm44010-201ENSMUST00000204432 331 ntBASIC0.39□□□□□ -2.35
Rpa3Q9CQ71 Gm34783-201ENSMUST00000209159 303 ntBASIC0.39□□□□□ -2.35
Rpa3Q9CQ71 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.39□□□□□ -2.35
Rpa3Q9CQ71 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.39□□□□□ -2.35
Rpa3Q9CQ71 Mir324-201ENSMUST00000083600 89 ntBASIC0.39□□□□□ -2.35
Rpa3Q9CQ71 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.38□□□□□ -2.35
Rpa3Q9CQ71 Gm26500-201ENSMUST00000101867 106 ntBASIC0.38□□□□□ -2.35
Rpa3Q9CQ71 Gm22759-201ENSMUST00000102276 96 ntBASIC0.38□□□□□ -2.35
Rpa3Q9CQ71 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Rpa3Q9CQ71 Gm37128-201ENSMUST00000192599 232 ntBASIC0.38□□□□□ -2.35
Rpa3Q9CQ71 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.38□□□□□ -2.35
Rpa3Q9CQ71 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.38□□□□□ -2.35
Rpa3Q9CQ71 Gm23448-201ENSMUST00000083151 104 ntBASIC0.38□□□□□ -2.35
Rpa3Q9CQ71 Gm14287-201ENSMUST00000121060 117 ntBASIC0.37□□□□□ -2.35
Rpa3Q9CQ71 Gm23996-201ENSMUST00000158062 131 ntBASIC0.37□□□□□ -2.35
Rpa3Q9CQ71 Mir3079-201ENSMUST00000175428 90 ntBASIC0.37□□□□□ -2.35
Rpa3Q9CQ71 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.37□□□□□ -2.35
Rpa3Q9CQ71 Gm22743-201ENSMUST00000083445 133 ntBASIC0.37□□□□□ -2.35
Rpa3Q9CQ71 Mir101a-201ENSMUST00000083517 83 ntBASIC0.37□□□□□ -2.35
Rpa3Q9CQ71 Gm23321-201ENSMUST00000104465 126 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm25507-201ENSMUST00000116981 144 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm25805-201ENSMUST00000122788 108 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm23169-201ENSMUST00000157157 112 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm25643-201ENSMUST00000158874 103 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm17148-201ENSMUST00000164702 249 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm20923-201ENSMUST00000190009 319 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm21088-201ENSMUST00000190875 316 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm44308-201ENSMUST00000197080 99 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Mir468-201ENSMUST00000197332 78 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm44828-201ENSMUST00000203745 106 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm23041-201ENSMUST00000083868 106 ntBASIC0.36□□□□□ -2.35
Rpa3Q9CQ71 Gm11856-201ENSMUST00000118712 276 ntBASIC0.35□□□□□ -2.35
Rpa3Q9CQ71 Gm14766-201ENSMUST00000121689 367 ntBASIC0.35□□□□□ -2.35
Rpa3Q9CQ71 Gm25783-201ENSMUST00000122525 190 ntBASIC0.35□□□□□ -2.35
Rpa3Q9CQ71 Gm27289-201ENSMUST00000183341 82 ntBASIC0.35□□□□□ -2.35
Rpa3Q9CQ71 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.35□□□□□ -2.35
Rpa3Q9CQ71 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.35□□□□□ -2.35
Rpa3Q9CQ71 Gm25801-201ENSMUST00000082638 106 ntBASIC0.35□□□□□ -2.35
Rpa3Q9CQ71 Gm24163-201ENSMUST00000093660 132 ntBASIC0.35□□□□□ -2.35
Rpa3Q9CQ71 Gm23212-201ENSMUST00000122718 60 ntBASIC0.34□□□□□ -2.36
Rpa3Q9CQ71 Gm23898-201ENSMUST00000158111 103 ntBASIC0.34□□□□□ -2.36
Rpa3Q9CQ71 Mir6346-201ENSMUST00000183982 81 ntBASIC0.34□□□□□ -2.36
Rpa3Q9CQ71 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.34□□□□□ -2.36
Rpa3Q9CQ71 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.34□□□□□ -2.36
Rpa3Q9CQ71 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.34□□□□□ -2.36
Rpa3Q9CQ71 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.34□□□□□ -2.36
Rpa3Q9CQ71 Gm23013-201ENSMUST00000104146 106 ntBASIC0.33□□□□□ -2.36
Rpa3Q9CQ71 Gm25968-201ENSMUST00000157167 100 ntBASIC0.33□□□□□ -2.36
Rpa3Q9CQ71 Gm22113-201ENSMUST00000158343 104 ntBASIC0.33□□□□□ -2.36
Rpa3Q9CQ71 Mir1961-201ENSMUST00000158643 112 ntBASIC0.33□□□□□ -2.36
Rpa3Q9CQ71 Gm20391-201ENSMUST00000174722 106 ntBASIC0.33□□□□□ -2.36
Rpa3Q9CQ71 Gm26430-201ENSMUST00000178054 107 ntBASIC0.33□□□□□ -2.36
Rpa3Q9CQ71 Gm44462-201ENSMUST00000199696 129 ntBASIC0.33□□□□□ -2.36
Rpa3Q9CQ71 Gm22809-201ENSMUST00000082743 156 ntBASIC0.33□□□□□ -2.36
Rpa3Q9CQ71 Gm23969-201ENSMUST00000083324 74 ntBASIC0.33□□□□□ -2.36
Rpa3Q9CQ71 Gm25627-201ENSMUST00000084003 153 ntBASIC0.33□□□□□ -2.36
Rpa3Q9CQ71 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Rpa3Q9CQ71 Gm26335-201ENSMUST00000178449 107 ntBASIC0.32□□□□□ -2.36
Rpa3Q9CQ71 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Rpa3Q9CQ71 Mir344-201ENSMUST00000083634 95 ntBASIC0.32□□□□□ -2.36
Rpa3Q9CQ71 Gm26303-201ENSMUST00000116845 119 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Gm14782-201ENSMUST00000120151 195 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Gm6272-201ENSMUST00000121256 171 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Gm26116-201ENSMUST00000175600 77 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Mir6389-201ENSMUST00000183661 102 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Gm27957-201ENSMUST00000184054 127 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Gm19777-201ENSMUST00000191940 358 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Gm45704-201ENSMUST00000212582 403 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Gm25138-201ENSMUST00000083248 136 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Gm26108-201ENSMUST00000083973 191 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.31□□□□□ -2.36
Rpa3Q9CQ71 Gm15379-201ENSMUST00000121224 648 ntBASIC0.3□□□□□ -2.36
Rpa3Q9CQ71 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Rpa3Q9CQ71 Gm16546-201ENSMUST00000159442 355 ntBASIC0.3□□□□□ -2.36
Rpa3Q9CQ71 Gm22914-201ENSMUST00000175195 77 ntBASIC0.3□□□□□ -2.36
Rpa3Q9CQ71 Gm28288-201ENSMUST00000191019 214 ntBASIC0.3□□□□□ -2.36
Rpa3Q9CQ71 Gm37997-201ENSMUST00000193515 267 ntBASIC0.3□□□□□ -2.36
Rpa3Q9CQ71 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.3□□□□□ -2.36
Rpa3Q9CQ71 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.3□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 727.3 ms