Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.57□□□□□ -2
Brf1Q8CFK2 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.57□□□□□ -2
Brf1Q8CFK2 Gm25130-201ENSMUST00000082650 156 ntBASIC2.57□□□□□ -2
Brf1Q8CFK2 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Brf1Q8CFK2 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Brf1Q8CFK2 Mir344e-201ENSMUST00000104677 66 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Gm22151-201ENSMUST00000116963 58 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.56□□□□□ -2
Brf1Q8CFK2 Gm24813-201ENSMUST00000175310 84 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Mir669k-201ENSMUST00000177742 127 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Gm22348-201ENSMUST00000178674 79 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Gm25673-201ENSMUST00000179957 127 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Gm27878-201ENSMUST00000184000 106 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Mir6376-201ENSMUST00000185149 131 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Gm28344-201ENSMUST00000185704 279 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Gm45386-201ENSMUST00000210194 218 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Gm19790-201ENSMUST00000214414 251 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Gm25796-201ENSMUST00000082645 163 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Snora69-201ENSMUST00000083708 131 ntBASIC2.56□□□□□ -2
Brf1Q8CFK2 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Brf1Q8CFK2 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.55□□□□□ -2
Brf1Q8CFK2 Gm26342-201ENSMUST00000104557 129 ntBASIC2.55□□□□□ -2
Brf1Q8CFK2 Gm23230-201ENSMUST00000157298 133 ntBASIC2.55□□□□□ -2
Brf1Q8CFK2 Gm24015-201ENSMUST00000157725 232 ntBASIC2.55□□□□□ -2
Brf1Q8CFK2 Gm24237-201ENSMUST00000157790 132 ntBASIC2.55□□□□□ -2
Brf1Q8CFK2 Gm23760-201ENSMUST00000158350 116 ntBASIC2.55□□□□□ -2
Brf1Q8CFK2 Gm23209-201ENSMUST00000158667 110 ntBASIC2.55□□□□□ -2
Brf1Q8CFK2 Mir7068-201ENSMUST00000183439 74 ntBASIC2.55□□□□□ -2
Brf1Q8CFK2 Gm44491-201ENSMUST00000196794 96 ntBASIC2.55□□□□□ -2
Brf1Q8CFK2 Gm45013-201ENSMUST00000206883 178 ntBASIC2.55□□□□□ -2
Brf1Q8CFK2 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.55□□□□□ -2
Brf1Q8CFK2 Gm15214-201ENSMUST00000122155 470 ntBASIC2.54□□□□□ -2
Brf1Q8CFK2 Gm23983-201ENSMUST00000157142 114 ntBASIC2.54□□□□□ -2
Brf1Q8CFK2 Mir3092-201ENSMUST00000174954 96 ntBASIC2.54□□□□□ -2
Brf1Q8CFK2 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.54□□□□□ -2
Brf1Q8CFK2 Mir721-201ENSMUST00000200230 88 ntBASIC2.54□□□□□ -2
Brf1Q8CFK2 Gm36189-201ENSMUST00000204113 523 ntBASIC2.54□□□□□ -2
Brf1Q8CFK2 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.54□□□□□ -2
Brf1Q8CFK2 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Brf1Q8CFK2 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Brf1Q8CFK2 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Brf1Q8CFK2 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.53□□□□□ -2
Brf1Q8CFK2 Gm25538-201ENSMUST00000101943 107 ntBASIC2.53□□□□□ -2
Brf1Q8CFK2 Gm13560-201ENSMUST00000121865 329 ntBASIC2.53□□□□□ -2
Brf1Q8CFK2 Gm22731-201ENSMUST00000158086 94 ntBASIC2.53□□□□□ -2
Brf1Q8CFK2 Gm25267-201ENSMUST00000158522 63 ntBASIC2.53□□□□□ -2
Brf1Q8CFK2 Gm6003-201ENSMUST00000187903 463 ntBASIC2.53□□□□□ -2
Brf1Q8CFK2 Trbv7-201ENSMUST00000193339 402 ntBASIC2.53□□□□□ -2
Brf1Q8CFK2 Gm24536-201ENSMUST00000083144 107 ntBASIC2.53□□□□□ -2
Brf1Q8CFK2 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Brf1Q8CFK2 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Brf1Q8CFK2 Gm14748-201ENSMUST00000119819 411 ntBASIC2.52□□□□□ -2.01
Brf1Q8CFK2 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.52□□□□□ -2.01
Brf1Q8CFK2 Gm46993-201ENSMUST00000220708 259 ntBASIC2.52□□□□□ -2.01
Brf1Q8CFK2 Gm23249-201ENSMUST00000083369 161 ntBASIC2.52□□□□□ -2.01
Brf1Q8CFK2 Gm24698-201ENSMUST00000083883 130 ntBASIC2.52□□□□□ -2.01
Brf1Q8CFK2 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Brf1Q8CFK2 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Brf1Q8CFK2 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.51□□□□□ -2.01
Brf1Q8CFK2 Gm23551-201ENSMUST00000116852 121 ntBASIC2.51□□□□□ -2.01
Brf1Q8CFK2 Gm23665-201ENSMUST00000158054 62 ntBASIC2.51□□□□□ -2.01
Brf1Q8CFK2 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.51□□□□□ -2.01
Brf1Q8CFK2 Gm6109-201ENSMUST00000223297 348 ntBASIC2.51□□□□□ -2.01
Brf1Q8CFK2 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Brf1Q8CFK2 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Brf1Q8CFK2 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Brf1Q8CFK2 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.5□□□□□ -2.01
Brf1Q8CFK2 Gm25094-201ENSMUST00000103992 131 ntBASIC2.5□□□□□ -2.01
Brf1Q8CFK2 Gm24595-201ENSMUST00000122501 110 ntBASIC2.5□□□□□ -2.01
Brf1Q8CFK2 Gm22586-201ENSMUST00000157507 122 ntBASIC2.5□□□□□ -2.01
Brf1Q8CFK2 Gm24837-201ENSMUST00000158683 81 ntBASIC2.5□□□□□ -2.01
Brf1Q8CFK2 Mir5118-201ENSMUST00000175551 67 ntBASIC2.5□□□□□ -2.01
Brf1Q8CFK2 Snord80-202ENSMUST00000199023 77 ntBASIC2.5□□□□□ -2.01
Brf1Q8CFK2 Gm35736-201ENSMUST00000203681 313 ntBASIC2.5□□□□□ -2.01
Brf1Q8CFK2 Gm5002-201ENSMUST00000207145 223 ntBASIC2.5□□□□□ -2.01
Brf1Q8CFK2 Snord104-201ENSMUST00000083192 70 ntBASIC2.5□□□□□ -2.01
Brf1Q8CFK2 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.5□□□□□ -2.01
Brf1Q8CFK2 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Brf1Q8CFK2 Gm24049-201ENSMUST00000102409 100 ntBASIC2.49□□□□□ -2.01
Brf1Q8CFK2 Gm22338-201ENSMUST00000157715 129 ntBASIC2.49□□□□□ -2.01
Brf1Q8CFK2 Gm24358-201ENSMUST00000158424 288 ntBASIC2.49□□□□□ -2.01
Brf1Q8CFK2 Gm38183-201ENSMUST00000193189 205 ntBASIC2.49□□□□□ -2.01
Brf1Q8CFK2 Snord118-201ENSMUST00000082965 135 ntBASIC2.49□□□□□ -2.01
Brf1Q8CFK2 Gm25513-201ENSMUST00000083861 162 ntBASIC2.49□□□□□ -2.01
Brf1Q8CFK2 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Brf1Q8CFK2 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.49□□□□□ -2.01
Brf1Q8CFK2 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.48□□□□□ -2.01
Brf1Q8CFK2 Gm12941-201ENSMUST00000117934 220 ntBASIC2.48□□□□□ -2.01
Brf1Q8CFK2 Gm23090-201ENSMUST00000177331 78 ntBASIC2.48□□□□□ -2.01
Brf1Q8CFK2 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.47□□□□□ -2.01
Brf1Q8CFK2 Gm25985-201ENSMUST00000122677 107 ntBASIC2.47□□□□□ -2.01
Brf1Q8CFK2 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.47□□□□□ -2.01
Brf1Q8CFK2 Gm25961-201ENSMUST00000157174 135 ntBASIC2.47□□□□□ -2.01
Brf1Q8CFK2 Rnu7-201ENSMUST00000158458 62 ntBASIC2.47□□□□□ -2.01
Brf1Q8CFK2 Gm23342-201ENSMUST00000158958 115 ntBASIC2.47□□□□□ -2.01
Brf1Q8CFK2 Gm22286-201ENSMUST00000179708 107 ntBASIC2.47□□□□□ -2.01
Brf1Q8CFK2 Mir3961-201ENSMUST00000198795 59 ntBASIC2.47□□□□□ -2.01
Brf1Q8CFK2 Gm22154-201ENSMUST00000083844 131 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 142 ms