Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm29022-201ENSMUST00000190702 225 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm34015-201ENSMUST00000194908 451 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm44396-201ENSMUST00000199843 114 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm43898-201ENSMUST00000204456 424 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Gm3867-201ENSMUST00000086108 279 ntBASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Ccdc28aQ8CEI3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Cfap61-214ENSMUST00000167179 183 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm25750-201ENSMUST00000175483 112 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm22802-201ENSMUST00000175621 89 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm16404-201ENSMUST00000177739 468 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm7958-201ENSMUST00000178255 468 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm7950-201ENSMUST00000179633 468 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm14598-201ENSMUST00000180109 468 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm14625-201ENSMUST00000180231 468 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm37713-201ENSMUST00000191746 198 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm38060-201ENSMUST00000194822 464 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm23055-201ENSMUST00000082805 94 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm23721-201ENSMUST00000083005 107 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm25650-201ENSMUST00000083784 162 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm24163-201ENSMUST00000093660 132 ntBASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
Ccdc28aQ8CEI3 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.33
Ccdc28aQ8CEI3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Gm23013-201ENSMUST00000104146 106 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Gm11794-201ENSMUST00000119446 237 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Gm23355-201ENSMUST00000177614 107 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Gm23714-201ENSMUST00000179259 105 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Gm7258-201ENSMUST00000179317 300 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Gm27410-201ENSMUST00000183851 115 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Mir6240-201ENSMUST00000184281 117 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Gm44811-201ENSMUST00000209120 228 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Gm24311-201ENSMUST00000082570 104 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Gm23614-201ENSMUST00000082598 107 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Mir33-201ENSMUST00000083531 69 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Snord33-201ENSMUST00000083694 84 ntBASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Ccdc28aQ8CEI3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc28aQ8CEI3 Gm25166-201ENSMUST00000158909 111 ntBASIC0.51□□□□□ -2.33
Ccdc28aQ8CEI3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.51□□□□□ -2.33
Ccdc28aQ8CEI3 Gm26914-201ENSMUST00000182262 223 ntBASIC0.51□□□□□ -2.33
Ccdc28aQ8CEI3 Mir7009-201ENSMUST00000184519 64 ntBASIC0.51□□□□□ -2.33
Ccdc28aQ8CEI3 Gm27539-201ENSMUST00000184971 224 ntBASIC0.51□□□□□ -2.33
Ccdc28aQ8CEI3 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.51□□□□□ -2.33
Ccdc28aQ8CEI3 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.51□□□□□ -2.33
Ccdc28aQ8CEI3 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.51□□□□□ -2.33
Ccdc28aQ8CEI3 Gm23203-201ENSMUST00000104374 107 ntBASIC0.5□□□□□ -2.33
Ccdc28aQ8CEI3 Gm23542-201ENSMUST00000158208 96 ntBASIC0.5□□□□□ -2.33
Ccdc28aQ8CEI3 Gm27894-201ENSMUST00000184177 92 ntBASIC0.5□□□□□ -2.33
Ccdc28aQ8CEI3 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.5□□□□□ -2.33
Ccdc28aQ8CEI3 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.5□□□□□ -2.33
Ccdc28aQ8CEI3 Gm22884-201ENSMUST00000083127 140 ntBASIC0.5□□□□□ -2.33
Ccdc28aQ8CEI3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 Gm22482-201ENSMUST00000122563 359 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 Gm22985-201ENSMUST00000122754 116 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 Gm23059-201ENSMUST00000158978 107 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 Mir3968-201ENSMUST00000175355 100 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 Gm28408-201ENSMUST00000191557 463 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 Gm37337-201ENSMUST00000192601 993 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 DQ267101-201ENSMUST00000082562 73 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 Gm25697-201ENSMUST00000082902 98 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 Mir32-201ENSMUST00000083610 70 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.49□□□□□ -2.33
Ccdc28aQ8CEI3 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Gm23142-201ENSMUST00000101848 105 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Gm26240-201ENSMUST00000101893 105 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Gm22791-201ENSMUST00000157232 145 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Gm23232-201ENSMUST00000157300 105 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Gm24810-201ENSMUST00000175317 70 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Mir6364-201ENSMUST00000183396 86 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Gm29229-201ENSMUST00000188874 323 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Gm36956-201ENSMUST00000193830 214 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Gm44465-201ENSMUST00000199536 114 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Mir490-201ENSMUST00000093567 84 ntBASIC0.48□□□□□ -2.33
Ccdc28aQ8CEI3 Gm24283-201ENSMUST00000104233 107 ntBASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 Gm11798-201ENSMUST00000119150 421 ntBASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 Gm15379-201ENSMUST00000121224 648 ntBASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Ccdc28aQ8CEI3 Gm23898-201ENSMUST00000158111 103 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms