Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm23005-201ENSMUST00000158950 136 ntBASIC2.48□□□□□ -2.01
Trim9Q8C7M3 Gm23337-201ENSMUST00000158959 118 ntBASIC2.48□□□□□ -2.01
Trim9Q8C7M3 Gm16546-201ENSMUST00000159442 355 ntBASIC2.48□□□□□ -2.01
Trim9Q8C7M3 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim9Q8C7M3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim9Q8C7M3 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.48□□□□□ -2.01
Trim9Q8C7M3 Gm18502-201ENSMUST00000218679 199 ntBASIC2.48□□□□□ -2.01
Trim9Q8C7M3 Gm24977-201ENSMUST00000083106 163 ntBASIC2.48□□□□□ -2.01
Trim9Q8C7M3 Gm26493-201ENSMUST00000083155 136 ntBASIC2.48□□□□□ -2.01
Trim9Q8C7M3 Gm23138-201ENSMUST00000083365 103 ntBASIC2.48□□□□□ -2.01
Trim9Q8C7M3 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trim9Q8C7M3 Gm25485-201ENSMUST00000104120 132 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm13913-201ENSMUST00000121126 260 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm24896-201ENSMUST00000122741 135 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm25012-201ENSMUST00000158396 164 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm26403-201ENSMUST00000158500 105 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm16162-201ENSMUST00000162296 297 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm25642-201ENSMUST00000175137 66 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Mir8090-201ENSMUST00000185078 136 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm28647-201ENSMUST00000188416 197 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.47□□□□□ -2.01
Trim9Q8C7M3 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm22972-201ENSMUST00000083297 131 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm23246-201ENSMUST00000083371 67 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Gm23040-201ENSMUST00000083869 163 ntBASIC2.47□□□□□ -2.01
Trim9Q8C7M3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
Trim9Q8C7M3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.46□□□□□ -2.01
Trim9Q8C7M3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Mir1298-201ENSMUST00000116681 98 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Gm14843-201ENSMUST00000119596 212 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Gm16510-201ENSMUST00000153501 249 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Gm24911-201ENSMUST00000157292 136 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Mir1927-201ENSMUST00000158579 109 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Gm22666-201ENSMUST00000158717 164 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Gm15235-201ENSMUST00000200572 194 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Gm44024-201ENSMUST00000203008 476 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Gm45522-201ENSMUST00000210784 166 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.46□□□□□ -2.02
Trim9Q8C7M3 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Gm25814-201ENSMUST00000082754 107 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Mir127-201ENSMUST00000093568 70 ntBASIC2.46□□□□□ -2.02
Trim9Q8C7M3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Gm22148-201ENSMUST00000104445 107 ntBASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Gm22083-201ENSMUST00000157586 102 ntBASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Gm24054-201ENSMUST00000158619 105 ntBASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Mir3075-201ENSMUST00000175340 85 ntBASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Mir7232-201ENSMUST00000197929 74 ntBASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Mir1291-201ENSMUST00000199842 117 ntBASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Mir497-201ENSMUST00000200557 84 ntBASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Snora34-201ENSMUST00000083402 138 ntBASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Gm24410-201ENSMUST00000083433 107 ntBASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trim9Q8C7M3 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.44□□□□□ -2.02
Trim9Q8C7M3 Gm13922-201ENSMUST00000119505 156 ntBASIC2.44□□□□□ -2.02
Trim9Q8C7M3 Gm22384-201ENSMUST00000158187 104 ntBASIC2.44□□□□□ -2.02
Trim9Q8C7M3 Gm44481-201ENSMUST00000197288 84 ntBASIC2.44□□□□□ -2.02
Trim9Q8C7M3 Gm42988-201ENSMUST00000198116 225 ntBASIC2.44□□□□□ -2.02
Trim9Q8C7M3 Gm44339-201ENSMUST00000200598 84 ntBASIC2.44□□□□□ -2.02
Trim9Q8C7M3 Gm25199-201ENSMUST00000083095 104 ntBASIC2.44□□□□□ -2.02
Trim9Q8C7M3 Mir186-201ENSMUST00000083497 71 ntBASIC2.44□□□□□ -2.02
Trim9Q8C7M3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trim9Q8C7M3 Gm24126-201ENSMUST00000104111 106 ntBASIC2.43□□□□□ -2.02
Trim9Q8C7M3 Snord11-201ENSMUST00000158468 84 ntBASIC2.43□□□□□ -2.02
Trim9Q8C7M3 Gm23194-201ENSMUST00000158813 105 ntBASIC2.43□□□□□ -2.02
Trim9Q8C7M3 Gm22093-201ENSMUST00000158980 111 ntBASIC2.43□□□□□ -2.02
Trim9Q8C7M3 Gm29603-201ENSMUST00000186792 334 ntBASIC2.43□□□□□ -2.02
Trim9Q8C7M3 Mir378a-201ENSMUST00000198300 66 ntBASIC2.43□□□□□ -2.02
Trim9Q8C7M3 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.43□□□□□ -2.02
Trim9Q8C7M3 Mir488-201ENSMUST00000093595 109 ntBASIC2.43□□□□□ -2.02
Trim9Q8C7M3 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.43□□□□□ -2.02
Trim9Q8C7M3 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.43□□□□□ -2.02
Trim9Q8C7M3 Gm6025-201ENSMUST00000121517 201 ntBASIC2.42□□□□□ -2.02
Trim9Q8C7M3 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.42□□□□□ -2.02
Trim9Q8C7M3 Gm22477-201ENSMUST00000122569 316 ntBASIC2.42□□□□□ -2.02
Trim9Q8C7M3 Gm22349-201ENSMUST00000157864 107 ntBASIC2.42□□□□□ -2.02
Trim9Q8C7M3 Gm24900-201ENSMUST00000158128 134 ntBASIC2.42□□□□□ -2.02
Trim9Q8C7M3 Gm22139-201ENSMUST00000158747 105 ntBASIC2.42□□□□□ -2.02
Trim9Q8C7M3 Gm24705-201ENSMUST00000082808 107 ntBASIC2.42□□□□□ -2.02
Trim9Q8C7M3 Mir340-201ENSMUST00000083483 98 ntBASIC2.42□□□□□ -2.02
Trim9Q8C7M3 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Trim9Q8C7M3 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim9Q8C7M3 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim9Q8C7M3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.41□□□□□ -2.02
Trim9Q8C7M3 Snord89-201ENSMUST00000104516 110 ntBASIC2.41□□□□□ -2.02
Trim9Q8C7M3 Gm14602-201ENSMUST00000118625 340 ntBASIC2.41□□□□□ -2.02
Trim9Q8C7M3 Gm13560-201ENSMUST00000121865 329 ntBASIC2.41□□□□□ -2.02
Trim9Q8C7M3 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.41□□□□□ -2.02
Trim9Q8C7M3 Gm22227-201ENSMUST00000157356 259 ntBASIC2.41□□□□□ -2.02
Trim9Q8C7M3 Gm23665-201ENSMUST00000158054 62 ntBASIC2.41□□□□□ -2.02
Trim9Q8C7M3 Mir28b-201ENSMUST00000175399 80 ntBASIC2.41□□□□□ -2.02
Trim9Q8C7M3 Gm25933-201ENSMUST00000178943 108 ntBASIC2.41□□□□□ -2.02
Trim9Q8C7M3 Gm23190-201ENSMUST00000180307 64 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 234.2 ms