Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm44903-201ENSMUST00000206840 130 ntBASIC2.99□□□□□ -1.93
Ubp1Q811S7 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Ubp1Q811S7 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.99□□□□□ -1.93
Ubp1Q811S7 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ubp1Q811S7 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
Ubp1Q811S7 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.99□□□□□ -1.93
Ubp1Q811S7 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ubp1Q811S7 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.98□□□□□ -1.93
Ubp1Q811S7 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.98□□□□□ -1.93
Ubp1Q811S7 Gm22187-201ENSMUST00000157819 129 ntBASIC2.98□□□□□ -1.93
Ubp1Q811S7 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.98□□□□□ -1.93
Ubp1Q811S7 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.98□□□□□ -1.93
Ubp1Q811S7 Gm22306-201ENSMUST00000082692 107 ntBASIC2.98□□□□□ -1.93
Ubp1Q811S7 Mir34a-201ENSMUST00000083559 102 ntBASIC2.98□□□□□ -1.93
Ubp1Q811S7 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ubp1Q811S7 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.98□□□□□ -1.93
Ubp1Q811S7 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Ubp1Q811S7 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.97□□□□□ -1.93
Ubp1Q811S7 Gm11334-201ENSMUST00000121969 156 ntBASIC2.97□□□□□ -1.93
Ubp1Q811S7 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.97□□□□□ -1.93
Ubp1Q811S7 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ubp1Q811S7 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.97□□□□□ -1.93
Ubp1Q811S7 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ubp1Q811S7 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.96□□□□□ -1.94
Ubp1Q811S7 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ubp1Q811S7 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Ubp1Q811S7 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Ubp1Q811S7 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Ubp1Q811S7 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Ubp1Q811S7 Gm25996-201ENSMUST00000175393 117 ntBASIC2.96□□□□□ -1.94
Ubp1Q811S7 Gm23860-201ENSMUST00000179446 132 ntBASIC2.96□□□□□ -1.94
Ubp1Q811S7 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.96□□□□□ -1.94
Ubp1Q811S7 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.96□□□□□ -1.94
Ubp1Q811S7 Gm25627-201ENSMUST00000084003 153 ntBASIC2.96□□□□□ -1.94
Ubp1Q811S7 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Ubp1Q811S7 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ubp1Q811S7 Gm25308-201ENSMUST00000104171 158 ntBASIC2.95□□□□□ -1.94
Ubp1Q811S7 Gm24482-201ENSMUST00000117005 93 ntBASIC2.95□□□□□ -1.94
Ubp1Q811S7 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.95□□□□□ -1.94
Ubp1Q811S7 Mir1931-201ENSMUST00000158589 119 ntBASIC2.95□□□□□ -1.94
Ubp1Q811S7 Gm26157-201ENSMUST00000158974 126 ntBASIC2.95□□□□□ -1.94
Ubp1Q811S7 Gm23567-201ENSMUST00000178005 107 ntBASIC2.95□□□□□ -1.94
Ubp1Q811S7 Gm29604-201ENSMUST00000187176 163 ntBASIC2.95□□□□□ -1.94
Ubp1Q811S7 Gm28669-201ENSMUST00000188400 100 ntBASIC2.95□□□□□ -1.94
Ubp1Q811S7 Gm43898-201ENSMUST00000204456 424 ntBASIC2.95□□□□□ -1.94
Ubp1Q811S7 Gm46233-201ENSMUST00000217831 449 ntBASIC2.95□□□□□ -1.94
Ubp1Q811S7 Gm23249-201ENSMUST00000083369 161 ntBASIC2.95□□□□□ -1.94
Ubp1Q811S7 Gm24449-201ENSMUST00000083985 106 ntBASIC2.95□□□□□ -1.94
Ubp1Q811S7 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ubp1Q811S7 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
Ubp1Q811S7 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Ubp1Q811S7 Gm24376-201ENSMUST00000104399 127 ntBASIC2.94□□□□□ -1.94
Ubp1Q811S7 Gm22768-201ENSMUST00000158366 153 ntBASIC2.94□□□□□ -1.94
Ubp1Q811S7 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.94□□□□□ -1.94
Ubp1Q811S7 Gm43217-201ENSMUST00000199513 367 ntBASIC2.94□□□□□ -1.94
Ubp1Q811S7 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.94□□□□□ -1.94
Ubp1Q811S7 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.94□□□□□ -1.94
Ubp1Q811S7 Gm25797-201ENSMUST00000082640 107 ntBASIC2.94□□□□□ -1.94
Ubp1Q811S7 Mir184-201ENSMUST00000083662 69 ntBASIC2.94□□□□□ -1.94
Ubp1Q811S7 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.94□□□□□ -1.94
Ubp1Q811S7 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.93□□□□□ -1.94
Ubp1Q811S7 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.93□□□□□ -1.94
Ubp1Q811S7 Gm24747-201ENSMUST00000157835 87 ntBASIC2.93□□□□□ -1.94
Ubp1Q811S7 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.93□□□□□ -1.94
Ubp1Q811S7 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ubp1Q811S7 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.93□□□□□ -1.94
Ubp1Q811S7 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ubp1Q811S7 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ubp1Q811S7 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ubp1Q811S7 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm23599-201ENSMUST00000157261 251 ntBASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm24559-201ENSMUST00000157519 121 ntBASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm25884-201ENSMUST00000157782 62 ntBASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm22961-201ENSMUST00000157964 106 ntBASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm24851-201ENSMUST00000158028 103 ntBASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm23504-201ENSMUST00000158988 95 ntBASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm44481-201ENSMUST00000197288 84 ntBASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm44339-201ENSMUST00000200598 84 ntBASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm19855-201ENSMUST00000210145 249 ntBASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm45791-201ENSMUST00000212908 352 ntBASIC2.92□□□□□ -1.94
Ubp1Q811S7 Mir489-201ENSMUST00000093599 107 ntBASIC2.92□□□□□ -1.94
Ubp1Q811S7 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Ubp1Q811S7 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ubp1Q811S7 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ubp1Q811S7 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Ubp1Q811S7 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ubp1Q811S7 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ubp1Q811S7 Gm22939-201ENSMUST00000103958 131 ntBASIC2.91□□□□□ -1.94
Ubp1Q811S7 Gm11644-201ENSMUST00000119735 150 ntBASIC2.91□□□□□ -1.94
Ubp1Q811S7 Gm24926-201ENSMUST00000178053 79 ntBASIC2.91□□□□□ -1.94
Ubp1Q811S7 Gm22632-201ENSMUST00000178266 79 ntBASIC2.91□□□□□ -1.94
Ubp1Q811S7 Gm27249-201ENSMUST00000185049 328 ntBASIC2.91□□□□□ -1.94
Ubp1Q811S7 Gm8219-201ENSMUST00000218309 242 ntBASIC2.91□□□□□ -1.94
Ubp1Q811S7 Gm24148-201ENSMUST00000082762 80 ntBASIC2.91□□□□□ -1.94
Ubp1Q811S7 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Ubp1Q811S7 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
Ubp1Q811S7 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.9□□□□□ -1.94
Ubp1Q811S7 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.9□□□□□ -1.94
Ubp1Q811S7 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 192.4 ms