Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm15214-201ENSMUST00000122155 470 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm24632-201ENSMUST00000122770 323 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm22075-201ENSMUST00000158599 192 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm24656-201ENSMUST00000177548 132 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm25253-201ENSMUST00000179958 107 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm42774-201ENSMUST00000198854 283 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm36189-201ENSMUST00000204113 523 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm46993-201ENSMUST00000220708 259 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm25204-201ENSMUST00000082843 106 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Gm22973-201ENSMUST00000083298 191 ntBASIC1.59□□□□□ -2.15
Upk3bQ80YF6 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Upk3bQ80YF6 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
Upk3bQ80YF6 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Gm23015-201ENSMUST00000104145 128 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Gm12143-201ENSMUST00000119666 332 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Mir1967-201ENSMUST00000157789 82 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Gm22731-201ENSMUST00000158086 94 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Gm22500-201ENSMUST00000158982 99 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Mir6916-201ENSMUST00000184514 63 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Gm28344-201ENSMUST00000185704 279 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Gm37778-201ENSMUST00000191732 190 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Gm18546-201ENSMUST00000197245 676 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Gm44256-201ENSMUST00000203304 335 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Mir222-201ENSMUST00000083537 79 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Mir384-201ENSMUST00000083565 88 ntBASIC1.58□□□□□ -2.16
Upk3bQ80YF6 Mir767-201ENSMUST00000103256 107 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gm26293-201ENSMUST00000104170 84 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gm16328-201ENSMUST00000126985 196 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gm22842-201ENSMUST00000157709 118 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gm25711-201ENSMUST00000158633 128 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gm24277-201ENSMUST00000158661 104 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gm5900-201ENSMUST00000179862 375 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gm27699-201ENSMUST00000183553 180 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gm27399-201ENSMUST00000184250 78 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gm29014-201ENSMUST00000191422 326 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gm22421-201ENSMUST00000083058 107 ntBASIC1.57□□□□□ -2.16
Upk3bQ80YF6 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Upk3bQ80YF6 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.56□□□□□ -2.16
Upk3bQ80YF6 Gm24572-201ENSMUST00000175505 88 ntBASIC1.56□□□□□ -2.16
Upk3bQ80YF6 Gm27443-201ENSMUST00000184660 98 ntBASIC1.56□□□□□ -2.16
Upk3bQ80YF6 Gm34139-201ENSMUST00000196166 294 ntBASIC1.56□□□□□ -2.16
Upk3bQ80YF6 Gm45754-201ENSMUST00000212380 279 ntBASIC1.56□□□□□ -2.16
Upk3bQ80YF6 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Upk3bQ80YF6 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Upk3bQ80YF6 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Upk3bQ80YF6 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm12512-201ENSMUST00000119620 217 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm24598-201ENSMUST00000122510 74 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm22221-201ENSMUST00000157362 103 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm24478-201ENSMUST00000157439 158 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm23101-201ENSMUST00000157550 137 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm24015-201ENSMUST00000157725 232 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Mir1951-201ENSMUST00000157981 89 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Mir7021-201ENSMUST00000197026 63 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm44477-201ENSMUST00000199661 110 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm45116-201ENSMUST00000207392 275 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.55□□□□□ -2.16
Upk3bQ80YF6 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm22704-201ENSMUST00000083027 137 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm24977-201ENSMUST00000083106 163 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm22972-201ENSMUST00000083297 131 ntBASIC1.55□□□□□ -2.16
Upk3bQ80YF6 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Upk3bQ80YF6 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Gm24982-201ENSMUST00000104456 132 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Gm13801-201ENSMUST00000120750 160 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Gm13797-201ENSMUST00000121792 120 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Gm24594-201ENSMUST00000122502 99 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Snord11-201ENSMUST00000158468 84 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Gm27760-201ENSMUST00000185048 114 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Gm33866-201ENSMUST00000196911 289 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Gm20734-201ENSMUST00000216939 193 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Gm22248-201ENSMUST00000082482 150 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Snord82-201ENSMUST00000082889 70 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Gm24453-201ENSMUST00000083346 76 ntBASIC1.54□□□□□ -2.16
Upk3bQ80YF6 Gm22935-201ENSMUST00000103960 104 ntBASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Gm22217-201ENSMUST00000157556 313 ntBASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Gm25371-201ENSMUST00000158162 101 ntBASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Gm6003-201ENSMUST00000187903 463 ntBASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Gm37081-201ENSMUST00000192034 196 ntBASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Gm24625-201ENSMUST00000082622 130 ntBASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Gm24615-201ENSMUST00000083268 113 ntBASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Mir300-201ENSMUST00000083485 79 ntBASIC1.53□□□□□ -2.16
Upk3bQ80YF6 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 161.2 ms