Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm25935-201ENSMUST00000178746 107 ntBASIC2.28□□□□□ -2.04
Usp49Q6P9L4 Mir7016-201ENSMUST00000184308 72 ntBASIC2.28□□□□□ -2.04
Usp49Q6P9L4 Gm29014-201ENSMUST00000191422 326 ntBASIC2.28□□□□□ -2.04
Usp49Q6P9L4 Gm45386-201ENSMUST00000210194 218 ntBASIC2.28□□□□□ -2.04
Usp49Q6P9L4 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.28□□□□□ -2.04
Usp49Q6P9L4 Snora19-201ENSMUST00000082962 132 ntBASIC2.28□□□□□ -2.04
Usp49Q6P9L4 Gm23658-201ENSMUST00000083233 132 ntBASIC2.28□□□□□ -2.04
Usp49Q6P9L4 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.27□□□□□ -2.05
Usp49Q6P9L4 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.27□□□□□ -2.05
Usp49Q6P9L4 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.27□□□□□ -2.05
Usp49Q6P9L4 Gm6444-201ENSMUST00000119611 458 ntBASIC2.27□□□□□ -2.05
Usp49Q6P9L4 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.27□□□□□ -2.05
Usp49Q6P9L4 Gm25015-201ENSMUST00000158400 128 ntBASIC2.27□□□□□ -2.05
Usp49Q6P9L4 Gm27979-201ENSMUST00000185126 56 ntBASIC2.27□□□□□ -2.05
Usp49Q6P9L4 Gm43563-201ENSMUST00000196761 198 ntBASIC2.27□□□□□ -2.05
Usp49Q6P9L4 Gm25820-201ENSMUST00000198589 127 ntBASIC2.27□□□□□ -2.05
Usp49Q6P9L4 Gm25204-201ENSMUST00000082843 106 ntBASIC2.27□□□□□ -2.05
Usp49Q6P9L4 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Usp49Q6P9L4 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm23010-201ENSMUST00000104151 126 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Snord19-201ENSMUST00000104609 76 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm25783-201ENSMUST00000122525 190 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm25321-201ENSMUST00000122558 102 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm26279-201ENSMUST00000157095 102 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm24478-201ENSMUST00000157439 158 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm25424-201ENSMUST00000157612 58 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm20438-201ENSMUST00000174441 329 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm24390-201ENSMUST00000179578 62 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm25636-201ENSMUST00000082666 133 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm24453-201ENSMUST00000083346 76 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm10360-201ENSMUST00000097219 272 ntBASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Usp49Q6P9L4 Gm26154-201ENSMUST00000102339 96 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm22935-201ENSMUST00000103960 104 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm25961-201ENSMUST00000157174 135 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm26345-201ENSMUST00000157534 120 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm26405-201ENSMUST00000158495 100 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm25834-201ENSMUST00000158916 101 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm24510-201ENSMUST00000174965 94 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm27878-201ENSMUST00000184000 106 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Mir6901-201ENSMUST00000185062 62 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm18546-201ENSMUST00000197245 676 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm45002-201ENSMUST00000208045 120 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm6109-201ENSMUST00000223297 348 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Gm22421-201ENSMUST00000083058 107 ntBASIC2.25□□□□□ -2.05
Usp49Q6P9L4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Usp49Q6P9L4 Gm23766-201ENSMUST00000103894 80 ntBASIC2.24□□□□□ -2.05
Usp49Q6P9L4 Gm23983-201ENSMUST00000157142 114 ntBASIC2.24□□□□□ -2.05
Usp49Q6P9L4 Gm24277-201ENSMUST00000158661 104 ntBASIC2.24□□□□□ -2.05
Usp49Q6P9L4 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Usp49Q6P9L4 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.24□□□□□ -2.05
Usp49Q6P9L4 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.24□□□□□ -2.05
Usp49Q6P9L4 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Gm24049-201ENSMUST00000102409 100 ntBASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Gm16328-201ENSMUST00000126985 196 ntBASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Mir1951-201ENSMUST00000157981 89 ntBASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Gm26022-201ENSMUST00000158663 108 ntBASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Gm24837-201ENSMUST00000158683 81 ntBASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Gm23571-201ENSMUST00000180073 127 ntBASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Gm45791-201ENSMUST00000212908 352 ntBASIC2.23□□□□□ -2.05
Usp49Q6P9L4 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.23□□□□□ -2.05
Usp49Q6P9L4 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.23□□□□□ -2.05
Usp49Q6P9L4 Gm23988-201ENSMUST00000117034 122 ntBASIC2.22□□□□□ -2.05
Usp49Q6P9L4 Gm22554-201ENSMUST00000157798 147 ntBASIC2.22□□□□□ -2.05
Usp49Q6P9L4 Gm23760-201ENSMUST00000158350 116 ntBASIC2.22□□□□□ -2.05
Usp49Q6P9L4 Gm25491-201ENSMUST00000158733 308 ntBASIC2.22□□□□□ -2.05
Usp49Q6P9L4 Gm22911-201ENSMUST00000177920 107 ntBASIC2.22□□□□□ -2.05
Usp49Q6P9L4 Gm22510-201ENSMUST00000179304 79 ntBASIC2.22□□□□□ -2.05
Usp49Q6P9L4 Gm26336-201ENSMUST00000179449 79 ntBASIC2.22□□□□□ -2.05
Usp49Q6P9L4 Gm26390-201ENSMUST00000179628 79 ntBASIC2.22□□□□□ -2.05
Usp49Q6P9L4 Gm27585-201ENSMUST00000183717 199 ntBASIC2.22□□□□□ -2.05
Usp49Q6P9L4 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.22□□□□□ -2.05
Usp49Q6P9L4 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.22□□□□□ -2.05
Usp49Q6P9L4 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Usp49Q6P9L4 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.22□□□□□ -2.05
Usp49Q6P9L4 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Usp49Q6P9L4 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.21□□□□□ -2.06
Usp49Q6P9L4 Gm13797-201ENSMUST00000121792 120 ntBASIC2.21□□□□□ -2.06
Usp49Q6P9L4 Gm22731-201ENSMUST00000158086 94 ntBASIC2.21□□□□□ -2.06
Usp49Q6P9L4 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Usp49Q6P9L4 Gm23289-201ENSMUST00000175615 108 ntBASIC2.21□□□□□ -2.06
Usp49Q6P9L4 Mir7225-201ENSMUST00000184178 54 ntBASIC2.21□□□□□ -2.06
Usp49Q6P9L4 Gm34139-201ENSMUST00000196166 294 ntBASIC2.21□□□□□ -2.06
Usp49Q6P9L4 Gm25813-201ENSMUST00000082748 191 ntBASIC2.21□□□□□ -2.06
Usp49Q6P9L4 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Usp49Q6P9L4 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 132 ms