Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC3.92□□□□□ -1.78
Scaf1Q5U4C3 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Scaf1Q5U4C3 Gm27527-201ENSMUST00000183903 99 ntBASIC3.92□□□□□ -1.78
Scaf1Q5U4C3 Gm37545-201ENSMUST00000186512 148 ntBASIC3.92□□□□□ -1.78
Scaf1Q5U4C3 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Scaf1Q5U4C3 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.92□□□□□ -1.78
Scaf1Q5U4C3 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Mir542-201ENSMUST00000102186 85 ntBASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Gm24232-201ENSMUST00000104314 132 ntBASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Gm24054-201ENSMUST00000158619 105 ntBASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Gm23268-201ENSMUST00000175494 78 ntBASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Gm23090-201ENSMUST00000177331 78 ntBASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Gm27648-201ENSMUST00000184315 107 ntBASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Mir3969-201ENSMUST00000197106 92 ntBASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Scaf1Q5U4C3 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Scaf1Q5U4C3 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Scaf1Q5U4C3 Gm24691-201ENSMUST00000157762 140 ntBASIC3.9□□□□□ -1.79
Scaf1Q5U4C3 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.9□□□□□ -1.79
Scaf1Q5U4C3 AC098718.1-201ENSMUST00000226166 175 ntBASIC3.9□□□□□ -1.79
Scaf1Q5U4C3 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Scaf1Q5U4C3 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Scaf1Q5U4C3 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Scaf1Q5U4C3 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Scaf1Q5U4C3 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Scaf1Q5U4C3 Gm23080-201ENSMUST00000157846 103 ntBASIC3.89□□□□□ -1.79
Scaf1Q5U4C3 Gm34314-201ENSMUST00000203622 367 ntBASIC3.89□□□□□ -1.79
Scaf1Q5U4C3 Gm44578-201ENSMUST00000207236 3835 ntBASIC3.89□□□□□ -1.79
Scaf1Q5U4C3 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.89□□□□□ -1.79
Scaf1Q5U4C3 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Scaf1Q5U4C3 Snord100-201ENSMUST00000116836 74 ntBASIC3.88□□□□□ -1.79
Scaf1Q5U4C3 Mir7242-201ENSMUST00000183710 79 ntBASIC3.88□□□□□ -1.79
Scaf1Q5U4C3 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.88□□□□□ -1.79
Scaf1Q5U4C3 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.88□□□□□ -1.79
Scaf1Q5U4C3 Gm44966-201ENSMUST00000208096 157 ntBASIC3.88□□□□□ -1.79
Scaf1Q5U4C3 Gm6109-201ENSMUST00000223297 348 ntBASIC3.88□□□□□ -1.79
Scaf1Q5U4C3 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Scaf1Q5U4C3 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Scaf1Q5U4C3 Mir3092-201ENSMUST00000174954 96 ntBASIC3.87□□□□□ -1.79
Scaf1Q5U4C3 Mir7013-201ENSMUST00000183540 72 ntBASIC3.87□□□□□ -1.79
Scaf1Q5U4C3 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Scaf1Q5U4C3 Gm35736-201ENSMUST00000203681 313 ntBASIC3.87□□□□□ -1.79
Scaf1Q5U4C3 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.87□□□□□ -1.79
Scaf1Q5U4C3 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.87□□□□□ -1.79
Scaf1Q5U4C3 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Scaf1Q5U4C3 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.86□□□□□ -1.79
Scaf1Q5U4C3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Scaf1Q5U4C3 Gm24605-201ENSMUST00000104772 96 ntBASIC3.86□□□□□ -1.79
Scaf1Q5U4C3 Gm25280-201ENSMUST00000157269 101 ntBASIC3.86□□□□□ -1.79
Scaf1Q5U4C3 Gm27672-201ENSMUST00000183751 204 ntBASIC3.86□□□□□ -1.79
Scaf1Q5U4C3 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.86□□□□□ -1.79
Scaf1Q5U4C3 Gm22828-201ENSMUST00000083768 107 ntBASIC3.86□□□□□ -1.79
Scaf1Q5U4C3 Snord90-201ENSMUST00000104568 111 ntBASIC3.85□□□□□ -1.79
Scaf1Q5U4C3 Gm25945-201ENSMUST00000122484 135 ntBASIC3.85□□□□□ -1.79
Scaf1Q5U4C3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.85□□□□□ -1.79
Scaf1Q5U4C3 Gm22738-201ENSMUST00000083440 147 ntBASIC3.85□□□□□ -1.79
Scaf1Q5U4C3 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Scaf1Q5U4C3 Mir669b-201ENSMUST00000102172 97 ntBASIC3.84□□□□□ -1.79
Scaf1Q5U4C3 Gm22674-201ENSMUST00000104413 131 ntBASIC3.84□□□□□ -1.79
Scaf1Q5U4C3 Gm25270-201ENSMUST00000122606 138 ntBASIC3.84□□□□□ -1.79
Scaf1Q5U4C3 Gm22338-201ENSMUST00000157715 129 ntBASIC3.84□□□□□ -1.79
Scaf1Q5U4C3 Gm22612-201ENSMUST00000158293 101 ntBASIC3.84□□□□□ -1.79
Scaf1Q5U4C3 Gm22011-201ENSMUST00000158790 123 ntBASIC3.84□□□□□ -1.79
Scaf1Q5U4C3 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.84□□□□□ -1.79
Scaf1Q5U4C3 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.84□□□□□ -1.79
Scaf1Q5U4C3 Gm25814-201ENSMUST00000082754 107 ntBASIC3.84□□□□□ -1.79
Scaf1Q5U4C3 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Scaf1Q5U4C3 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Scaf1Q5U4C3 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Scaf1Q5U4C3 Gm23390-201ENSMUST00000157393 106 ntBASIC3.83□□□□□ -1.8
Scaf1Q5U4C3 Gm23325-201ENSMUST00000157422 129 ntBASIC3.83□□□□□ -1.8
Scaf1Q5U4C3 Gm24879-201ENSMUST00000158386 143 ntBASIC3.83□□□□□ -1.8
Scaf1Q5U4C3 Gm27934-201ENSMUST00000158795 63 ntBASIC3.83□□□□□ -1.8
Scaf1Q5U4C3 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.83□□□□□ -1.8
Scaf1Q5U4C3 AC168056.1-201ENSMUST00000225270 180 ntBASIC3.83□□□□□ -1.8
Scaf1Q5U4C3 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.83□□□□□ -1.8
Scaf1Q5U4C3 Gm23947-201ENSMUST00000093636 107 ntBASIC3.83□□□□□ -1.8
Scaf1Q5U4C3 Gm24586-201ENSMUST00000116695 89 ntBASIC3.82□□□□□ -1.8
Scaf1Q5U4C3 Mir1195-201ENSMUST00000116818 98 ntBASIC3.82□□□□□ -1.8
Scaf1Q5U4C3 Gm43381-201ENSMUST00000198553 165 ntBASIC3.82□□□□□ -1.8
Scaf1Q5U4C3 Gm26458-201ENSMUST00000082832 128 ntBASIC3.82□□□□□ -1.8
Scaf1Q5U4C3 Gm25136-201ENSMUST00000083253 115 ntBASIC3.82□□□□□ -1.8
Scaf1Q5U4C3 Gm10172-201ENSMUST00000085929 558 ntBASIC3.82□□□□□ -1.8
Scaf1Q5U4C3 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
Scaf1Q5U4C3 Gm24375-201ENSMUST00000104397 132 ntBASIC3.81□□□□□ -1.8
Scaf1Q5U4C3 Gm14567-201ENSMUST00000117155 174 ntBASIC3.81□□□□□ -1.8
Scaf1Q5U4C3 Gm24141-201ENSMUST00000122776 115 ntBASIC3.81□□□□□ -1.8
Scaf1Q5U4C3 Gm24291-201ENSMUST00000157633 162 ntBASIC3.81□□□□□ -1.8
Scaf1Q5U4C3 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.81□□□□□ -1.8
Scaf1Q5U4C3 AC127371.3-201ENSMUST00000228129 415 ntBASIC3.81□□□□□ -1.8
Scaf1Q5U4C3 Mir429-201ENSMUST00000083493 83 ntBASIC3.81□□□□□ -1.8
Scaf1Q5U4C3 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.8□□□□□ -1.8
Scaf1Q5U4C3 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scaf1Q5U4C3 Gm24171-201ENSMUST00000104126 131 ntBASIC3.8□□□□□ -1.8
Scaf1Q5U4C3 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 447.3 ms