Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm18617-201ENSMUST00000222311 259 ntBASIC2.45□□□□□ -2.02
Shroom1Q5SX79 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.45□□□□□ -2.02
Shroom1Q5SX79 Gm25628-201ENSMUST00000084002 105 ntBASIC2.45□□□□□ -2.02
Shroom1Q5SX79 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.45□□□□□ -2.02
Shroom1Q5SX79 Gm14748-201ENSMUST00000119819 411 ntBASIC2.44□□□□□ -2.02
Shroom1Q5SX79 Gm13433-201ENSMUST00000121701 240 ntBASIC2.44□□□□□ -2.02
Shroom1Q5SX79 Gm17020-201ENSMUST00000172274 274 ntBASIC2.44□□□□□ -2.02
Shroom1Q5SX79 Gm27878-201ENSMUST00000184000 106 ntBASIC2.44□□□□□ -2.02
Shroom1Q5SX79 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.44□□□□□ -2.02
Shroom1Q5SX79 Gm18213-201ENSMUST00000207850 178 ntBASIC2.44□□□□□ -2.02
Shroom1Q5SX79 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.44□□□□□ -2.02
Shroom1Q5SX79 AC153646.2-201ENSMUST00000220516 109 ntBASIC2.44□□□□□ -2.02
Shroom1Q5SX79 Gm25634-201ENSMUST00000082667 105 ntBASIC2.44□□□□□ -2.02
Shroom1Q5SX79 Gm24453-201ENSMUST00000083346 76 ntBASIC2.44□□□□□ -2.02
Shroom1Q5SX79 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Shroom1Q5SX79 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.44□□□□□ -2.02
Shroom1Q5SX79 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Gm12143-201ENSMUST00000119666 332 ntBASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Gm23642-201ENSMUST00000157858 258 ntBASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Gm28992-201ENSMUST00000190534 139 ntBASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Gm37918-201ENSMUST00000192071 120 ntBASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Gm45522-201ENSMUST00000210784 166 ntBASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Mir340-201ENSMUST00000083483 98 ntBASIC2.43□□□□□ -2.02
Shroom1Q5SX79 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Gm24937-201ENSMUST00000122597 134 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Gm25985-201ENSMUST00000122677 107 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Gm22281-201ENSMUST00000157198 103 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Gm22221-201ENSMUST00000157362 103 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Gm26482-201ENSMUST00000158015 62 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Gm24837-201ENSMUST00000158683 81 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Gm16561-201ENSMUST00000163001 192 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Gm33866-201ENSMUST00000196911 289 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Gm22248-201ENSMUST00000082482 150 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.42□□□□□ -2.02
Shroom1Q5SX79 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 Gm26135-201ENSMUST00000101993 72 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 Gm12941-201ENSMUST00000117934 220 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 Gm22947-201ENSMUST00000158559 91 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 Snord50b-201ENSMUST00000178497 72 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 Mir8090-201ENSMUST00000185078 136 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Shroom1Q5SX79 Gm45116-201ENSMUST00000207392 275 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 AC154282.1-201ENSMUST00000223154 265 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 Gm22421-201ENSMUST00000083058 107 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Shroom1Q5SX79 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.41□□□□□ -2.02
Shroom1Q5SX79 Gm23983-201ENSMUST00000157142 114 ntBASIC2.4□□□□□ -2.03
Shroom1Q5SX79 Gm23324-201ENSMUST00000157421 131 ntBASIC2.4□□□□□ -2.03
Shroom1Q5SX79 Gm28344-201ENSMUST00000185704 279 ntBASIC2.4□□□□□ -2.03
Shroom1Q5SX79 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.4□□□□□ -2.03
Shroom1Q5SX79 Gm11351-202ENSMUST00000225724 478 ntBASIC2.4□□□□□ -2.03
Shroom1Q5SX79 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Shroom1Q5SX79 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Mir374b-201ENSMUST00000102314 95 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Gm13913-201ENSMUST00000121126 260 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Gm26280-201ENSMUST00000157096 101 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Gm22381-201ENSMUST00000158186 107 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Gm25071-201ENSMUST00000175232 70 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Gm25820-202ENSMUST00000197479 128 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Mir3069-201ENSMUST00000198802 65 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Gm45445-201ENSMUST00000209586 232 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Gm7214-201ENSMUST00000222428 272 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Gm24313-201ENSMUST00000082561 133 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Gm25895-201ENSMUST00000083714 100 ntBASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Shroom1Q5SX79 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm26154-201ENSMUST00000102339 96 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm23015-201ENSMUST00000104145 128 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm22075-201ENSMUST00000158599 192 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm17161-201ENSMUST00000169187 524 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm20438-201ENSMUST00000174441 329 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm26435-201ENSMUST00000179026 107 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm23966-201ENSMUST00000179823 107 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Mir497-201ENSMUST00000200557 84 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm25204-201ENSMUST00000082843 106 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Gm22866-201ENSMUST00000083947 177 ntBASIC2.38□□□□□ -2.03
Shroom1Q5SX79 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Shroom1Q5SX79 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 159.1 ms