Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Mir6336-201ENSMUST00000183581 130 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.64□□□□□ -2.15
Trim58Q5NCC9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Gm45859-201ENSMUST00000212794 214 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Mir151-201ENSMUST00000083678 68 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.64□□□□□ -2.15
Trim58Q5NCC9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Trim58Q5NCC9 Gm25875-201ENSMUST00000104323 107 ntBASIC1.63□□□□□ -2.15
Trim58Q5NCC9 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.63□□□□□ -2.15
Trim58Q5NCC9 Gm25184-201ENSMUST00000157753 163 ntBASIC1.63□□□□□ -2.15
Trim58Q5NCC9 Gm26405-201ENSMUST00000158495 100 ntBASIC1.63□□□□□ -2.15
Trim58Q5NCC9 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.63□□□□□ -2.15
Trim58Q5NCC9 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.63□□□□□ -2.15
Trim58Q5NCC9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.63□□□□□ -2.15
Trim58Q5NCC9 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trim58Q5NCC9 Gm24204-201ENSMUST00000082950 107 ntBASIC1.63□□□□□ -2.15
Trim58Q5NCC9 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trim58Q5NCC9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Trim58Q5NCC9 Gm23492-201ENSMUST00000116837 115 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 Gm22221-201ENSMUST00000157362 103 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 Gm23182-201ENSMUST00000158688 135 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 Gm25994-201ENSMUST00000175392 101 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 Gm29603-201ENSMUST00000186792 334 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 Gm43563-201ENSMUST00000196761 198 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Trim58Q5NCC9 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 mt-Td-201ENSMUST00000082404 70 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 Gm24625-201ENSMUST00000082622 130 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 Gm24412-201ENSMUST00000083426 109 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 Mir211-201ENSMUST00000083651 106 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 Gm25409-201ENSMUST00000083764 131 ntBASIC1.62□□□□□ -2.15
Trim58Q5NCC9 Mir767-201ENSMUST00000103256 107 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm24632-201ENSMUST00000122770 323 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm24909-201ENSMUST00000157290 280 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Mir1949-201ENSMUST00000157434 141 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm23670-201ENSMUST00000157469 119 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm23536-201ENSMUST00000157541 134 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm22217-201ENSMUST00000157556 313 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm26435-201ENSMUST00000179026 107 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm22450-201ENSMUST00000179641 107 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm25473-201ENSMUST00000180191 107 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Mir6540-201ENSMUST00000184886 108 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm44491-201ENSMUST00000196794 96 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm44483-201ENSMUST00000197203 97 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm25357-201ENSMUST00000082745 72 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm24856-201ENSMUST00000082809 107 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm26071-201ENSMUST00000083261 107 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm24521-201ENSMUST00000083958 107 ntBASIC1.61□□□□□ -2.15
Trim58Q5NCC9 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Mir301b-201ENSMUST00000102333 97 ntBASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm26150-201ENSMUST00000157426 151 ntBASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm22556-201ENSMUST00000157803 100 ntBASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm26287-201ENSMUST00000158887 81 ntBASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm28921-201ENSMUST00000190219 378 ntBASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm44409-201ENSMUST00000198810 166 ntBASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.6□□□□□ -2.15
Trim58Q5NCC9 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.6□□□□□ -2.15
Trim58Q5NCC9 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm24042-201ENSMUST00000083114 103 ntBASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm10222-201ENSMUST00000088336 294 ntBASIC1.6□□□□□ -2.15
Trim58Q5NCC9 Gm24865-201ENSMUST00000103246 96 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm24385-201ENSMUST00000122694 350 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm24440-201ENSMUST00000157236 63 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm25333-201ENSMUST00000158035 246 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm24392-201ENSMUST00000158136 103 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm26022-201ENSMUST00000158663 108 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm25362-201ENSMUST00000158854 105 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm24667-201ENSMUST00000158938 103 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm24512-201ENSMUST00000174963 65 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm25253-201ENSMUST00000179958 107 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Mir3569-201ENSMUST00000185080 58 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm29022-201ENSMUST00000190702 225 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm44989-201ENSMUST00000204749 217 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm44959-201ENSMUST00000209127 231 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm24536-201ENSMUST00000083144 107 ntBASIC1.59□□□□□ -2.15
Trim58Q5NCC9 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
Trim58Q5NCC9 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Gm26339-201ENSMUST00000102368 99 ntBASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Gm22784-201ENSMUST00000104088 132 ntBASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Gm24835-201ENSMUST00000116777 111 ntBASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Gm24598-201ENSMUST00000122510 74 ntBASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Gm24510-201ENSMUST00000174965 94 ntBASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Gm22951-201ENSMUST00000179471 107 ntBASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Gm26092-201ENSMUST00000179798 97 ntBASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.58□□□□□ -2.16
Trim58Q5NCC9 Mir7063-201ENSMUST00000184158 91 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 160.5 ms