Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Snord50b-201ENSMUST00000178497 72 ntBASIC1.87□□□□□ -2.11
Ckap2Q3V1H1 Gm25235-201ENSMUST00000179933 107 ntBASIC1.87□□□□□ -2.11
Ckap2Q3V1H1 Gm18433-201ENSMUST00000192747 197 ntBASIC1.87□□□□□ -2.11
Ckap2Q3V1H1 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Ckap2Q3V1H1 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.86□□□□□ -2.11
Ckap2Q3V1H1 Gm24392-201ENSMUST00000158136 103 ntBASIC1.86□□□□□ -2.11
Ckap2Q3V1H1 Gm24667-201ENSMUST00000158938 103 ntBASIC1.86□□□□□ -2.11
Ckap2Q3V1H1 Gm9156-201ENSMUST00000189660 463 ntBASIC1.86□□□□□ -2.11
Ckap2Q3V1H1 Gm44491-201ENSMUST00000196794 96 ntBASIC1.86□□□□□ -2.11
Ckap2Q3V1H1 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.86□□□□□ -2.11
Ckap2Q3V1H1 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.86□□□□□ -2.11
Ckap2Q3V1H1 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.86□□□□□ -2.11
Ckap2Q3V1H1 Snord118-201ENSMUST00000082965 135 ntBASIC1.86□□□□□ -2.11
Ckap2Q3V1H1 Mir429-201ENSMUST00000083493 83 ntBASIC1.86□□□□□ -2.11
Ckap2Q3V1H1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Gm23951-201ENSMUST00000104029 132 ntBASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Gm14846-201ENSMUST00000121868 216 ntBASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Gm22386-201ENSMUST00000158192 129 ntBASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Gm16162-201ENSMUST00000162296 297 ntBASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Gm43865-201ENSMUST00000204721 127 ntBASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Gm24165-201ENSMUST00000082718 128 ntBASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Gm24536-201ENSMUST00000083144 107 ntBASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Gm24412-201ENSMUST00000083426 109 ntBASIC1.85□□□□□ -2.11
Ckap2Q3V1H1 Gm22097-201ENSMUST00000157929 278 ntBASIC1.84□□□□□ -2.11
Ckap2Q3V1H1 Snora15-201ENSMUST00000177461 131 ntBASIC1.84□□□□□ -2.11
Ckap2Q3V1H1 Gm5900-201ENSMUST00000179862 375 ntBASIC1.84□□□□□ -2.11
Ckap2Q3V1H1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.84□□□□□ -2.11
Ckap2Q3V1H1 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.84□□□□□ -2.11
Ckap2Q3V1H1 Gm25204-201ENSMUST00000082843 106 ntBASIC1.84□□□□□ -2.11
Ckap2Q3V1H1 Gm24042-201ENSMUST00000083114 103 ntBASIC1.84□□□□□ -2.11
Ckap2Q3V1H1 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ckap2Q3V1H1 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 Gm25184-201ENSMUST00000157753 163 ntBASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 Gm25333-201ENSMUST00000158035 246 ntBASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 Mir6351-201ENSMUST00000183826 99 ntBASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 Gm29657-201ENSMUST00000189807 342 ntBASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 Snord43-201ENSMUST00000199549 108 ntBASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 Gm22248-201ENSMUST00000082482 150 ntBASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 Mir151-201ENSMUST00000083678 68 ntBASIC1.83□□□□□ -2.12
Ckap2Q3V1H1 Gm23010-201ENSMUST00000104151 126 ntBASIC1.82□□□□□ -2.12
Ckap2Q3V1H1 Mir881-201ENSMUST00000104844 78 ntBASIC1.82□□□□□ -2.12
Ckap2Q3V1H1 Gm23219-201ENSMUST00000158123 87 ntBASIC1.82□□□□□ -2.12
Ckap2Q3V1H1 Gm22768-201ENSMUST00000158366 153 ntBASIC1.82□□□□□ -2.12
Ckap2Q3V1H1 Gm23854-201ENSMUST00000158378 108 ntBASIC1.82□□□□□ -2.12
Ckap2Q3V1H1 Gm25994-201ENSMUST00000175392 101 ntBASIC1.82□□□□□ -2.12
Ckap2Q3V1H1 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Ckap2Q3V1H1 Gm19123-201ENSMUST00000190716 651 ntBASIC1.82□□□□□ -2.12
Ckap2Q3V1H1 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ckap2Q3V1H1 Gm15067-201ENSMUST00000119534 156 ntBASIC1.81□□□□□ -2.12
Ckap2Q3V1H1 Gm24006-201ENSMUST00000158462 132 ntBASIC1.81□□□□□ -2.12
Ckap2Q3V1H1 Gm26022-201ENSMUST00000158663 108 ntBASIC1.81□□□□□ -2.12
Ckap2Q3V1H1 Gm22665-201ENSMUST00000158720 275 ntBASIC1.81□□□□□ -2.12
Ckap2Q3V1H1 Gm45859-201ENSMUST00000212794 214 ntBASIC1.81□□□□□ -2.12
Ckap2Q3V1H1 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.81□□□□□ -2.12
Ckap2Q3V1H1 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.81□□□□□ -2.12
Ckap2Q3V1H1 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.81□□□□□ -2.12
Ckap2Q3V1H1 Rny1-201ENSMUST00000083767 112 ntBASIC1.81□□□□□ -2.12
Ckap2Q3V1H1 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.81□□□□□ -2.12
Ckap2Q3V1H1 Gm14491-201ENSMUST00000121919 199 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Mir1949-201ENSMUST00000157434 141 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Mir1951-201ENSMUST00000157981 89 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Gm17113-201ENSMUST00000170118 171 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Gm20477-201ENSMUST00000174028 280 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Gm27402-201ENSMUST00000183890 120 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Mir7225-201ENSMUST00000184178 54 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Mir7017-201ENSMUST00000184894 62 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Gm29022-201ENSMUST00000190702 225 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Gm43427-201ENSMUST00000198188 331 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Mir320-201ENSMUST00000083594 82 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 Mir107-201ENSMUST00000083660 87 ntBASIC1.8□□□□□ -2.12
Ckap2Q3V1H1 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Gm23705-201ENSMUST00000104370 130 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Gm15281-201ENSMUST00000125181 351 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 U6.1-201ENSMUST00000157443 101 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Gm22603-201ENSMUST00000157603 96 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Gm23182-201ENSMUST00000158688 135 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Mir3086-201ENSMUST00000175072 87 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Gm23002-201ENSMUST00000179221 107 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Gm27511-201ENSMUST00000183502 127 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Gm43563-201ENSMUST00000196761 198 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Gm24151-201ENSMUST00000082758 141 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Mir301-201ENSMUST00000083655 86 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 Snora33-201ENSMUST00000093556 129 ntBASIC1.79□□□□□ -2.12
Ckap2Q3V1H1 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.78□□□□□ -2.12
Ckap2Q3V1H1 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
Ckap2Q3V1H1 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Ckap2Q3V1H1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Ckap2Q3V1H1 Gm15115-201ENSMUST00000121145 264 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 161.5 ms