Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm28383-201ENSMUST00000187563 139 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm29262-201ENSMUST00000190084 196 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Mir378a-201ENSMUST00000198300 66 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm16976-205ENSMUST00000227324 226 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm25204-201ENSMUST00000082843 106 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm24204-201ENSMUST00000082950 107 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Gm24042-201ENSMUST00000083114 103 ntBASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trim40Q3UWA4 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trim40Q3UWA4 Gm24635-201ENSMUST00000122712 128 ntBASIC1.46□□□□□ -2.18
Trim40Q3UWA4 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trim40Q3UWA4 Gm26181-201ENSMUST00000157687 106 ntBASIC1.46□□□□□ -2.18
Trim40Q3UWA4 Trbv7-201ENSMUST00000193339 402 ntBASIC1.46□□□□□ -2.18
Trim40Q3UWA4 Gm38019-201ENSMUST00000195133 380 ntBASIC1.46□□□□□ -2.18
Trim40Q3UWA4 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.46□□□□□ -2.18
Trim40Q3UWA4 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Trim40Q3UWA4 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.46□□□□□ -2.18
Trim40Q3UWA4 Gm13711-201ENSMUST00000119708 453 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Mir1951-201ENSMUST00000157981 89 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Gm23182-201ENSMUST00000158688 135 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Mir3057-201ENSMUST00000175040 91 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Gm22264-201ENSMUST00000178200 107 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Gm22450-201ENSMUST00000179641 107 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Gm25473-201ENSMUST00000180191 107 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Gm29308-201ENSMUST00000188863 315 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Gm22248-201ENSMUST00000082482 150 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Gm24856-201ENSMUST00000082809 107 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Gm26071-201ENSMUST00000083261 107 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Snord7-201ENSMUST00000083781 97 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Gm24521-201ENSMUST00000083958 107 ntBASIC1.45□□□□□ -2.18
Trim40Q3UWA4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trim40Q3UWA4 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trim40Q3UWA4 Gm25992-201ENSMUST00000102437 109 ntBASIC1.44□□□□□ -2.18
Trim40Q3UWA4 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.44□□□□□ -2.18
Trim40Q3UWA4 Gm24895-201ENSMUST00000122742 74 ntBASIC1.44□□□□□ -2.18
Trim40Q3UWA4 Gm25664-201ENSMUST00000157697 107 ntBASIC1.44□□□□□ -2.18
Trim40Q3UWA4 Gm22963-201ENSMUST00000157960 91 ntBASIC1.44□□□□□ -2.18
Trim40Q3UWA4 Gm26287-201ENSMUST00000158887 81 ntBASIC1.44□□□□□ -2.18
Trim40Q3UWA4 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.44□□□□□ -2.18
Trim40Q3UWA4 Mir6997-201ENSMUST00000184313 71 ntBASIC1.44□□□□□ -2.18
Trim40Q3UWA4 Mir6540-201ENSMUST00000184886 108 ntBASIC1.44□□□□□ -2.18
Trim40Q3UWA4 Gm27959-201ENSMUST00000185172 111 ntBASIC1.44□□□□□ -2.18
Trim40Q3UWA4 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.44□□□□□ -2.18
Trim40Q3UWA4 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.43□□□□□ -2.18
Trim40Q3UWA4 Gm26339-201ENSMUST00000102368 99 ntBASIC1.43□□□□□ -2.18
Trim40Q3UWA4 Mir653-201ENSMUST00000102402 85 ntBASIC1.43□□□□□ -2.18
Trim40Q3UWA4 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.43□□□□□ -2.18
Trim40Q3UWA4 Gm22097-201ENSMUST00000157929 278 ntBASIC1.43□□□□□ -2.18
Trim40Q3UWA4 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.43□□□□□ -2.18
Trim40Q3UWA4 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trim40Q3UWA4 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm12797-201ENSMUST00000118645 273 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm6444-201ENSMUST00000119611 458 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm25362-201ENSMUST00000158854 105 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm17113-201ENSMUST00000170118 171 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Mir5118-201ENSMUST00000175551 67 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm22862-201ENSMUST00000178593 121 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm25024-201ENSMUST00000179667 104 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Mir7068-201ENSMUST00000183439 74 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm28921-201ENSMUST00000190219 378 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm37089-201ENSMUST00000195616 129 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm44977-201ENSMUST00000205283 420 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm44959-201ENSMUST00000209127 231 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm19855-201ENSMUST00000210145 249 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Mir221-201ENSMUST00000083488 95 ntBASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trim40Q3UWA4 Gm24423-201ENSMUST00000101982 106 ntBASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Gm23109-201ENSMUST00000116867 126 ntBASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Gm15115-201ENSMUST00000121145 264 ntBASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Gm22279-201ENSMUST00000157200 93 ntBASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Gm23221-201ENSMUST00000158118 93 ntBASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Mir6352-201ENSMUST00000184495 116 ntBASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Gm27545-201ENSMUST00000184755 202 ntBASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Gm43563-201ENSMUST00000196761 198 ntBASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Gm6105-201ENSMUST00000200580 624 ntBASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
Trim40Q3UWA4 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.4□□□□□ -2.18
Trim40Q3UWA4 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Gm22784-201ENSMUST00000104088 132 ntBASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Gm24392-201ENSMUST00000158136 103 ntBASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Gm23208-201ENSMUST00000158666 127 ntBASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Gm24667-201ENSMUST00000158938 103 ntBASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Gm16584-201ENSMUST00000159267 189 ntBASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.4□□□□□ -2.19
Trim40Q3UWA4 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 138.6 ms