Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Upf3bQ3ULL6 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 Gm14296-202ENSMUST00000108931 750 ntBASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 Gm11248-201ENSMUST00000119568 201 ntBASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 Gm14392-201ENSMUST00000120332 401 ntBASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 Gm14413-201ENSMUST00000122158 408 ntBASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 Gm26358-201ENSMUST00000158215 97 ntBASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 Gm38280-201ENSMUST00000192610 158 ntBASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 Gm22685-201ENSMUST00000082848 106 ntBASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 Mir33-201ENSMUST00000083531 69 ntBASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Upf3bQ3ULL6 Gm24271-201ENSMUST00000102327 111 ntBASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Gm25052-201ENSMUST00000122661 158 ntBASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Gm16265-201ENSMUST00000134558 108 ntBASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Gm25559-201ENSMUST00000157182 74 ntBASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Gm22113-201ENSMUST00000158343 104 ntBASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Gm24487-201ENSMUST00000178017 63 ntBASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Gm28862-201ENSMUST00000188246 163 ntBASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Gm28648-201ENSMUST00000190092 343 ntBASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Gm45402-201ENSMUST00000211796 223 ntBASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Mir216a-201ENSMUST00000083605 72 ntBASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
Upf3bQ3ULL6 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.65□□□□□ -2.31
Upf3bQ3ULL6 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.65□□□□□ -2.31
Upf3bQ3ULL6 Gm28597-201ENSMUST00000187664 666 ntBASIC0.65□□□□□ -2.31
Upf3bQ3ULL6 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.65□□□□□ -2.31
Upf3bQ3ULL6 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.65□□□□□ -2.31
Upf3bQ3ULL6 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Upf3bQ3ULL6 Gm34015-201ENSMUST00000194908 451 ntBASIC0.65□□□□□ -2.31
Upf3bQ3ULL6 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.65□□□□□ -2.31
Upf3bQ3ULL6 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Upf3bQ3ULL6 Gm23097-201ENSMUST00000083448 105 ntBASIC0.65□□□□□ -2.31
Upf3bQ3ULL6 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.64□□□□□ -2.31
Upf3bQ3ULL6 Gm14293-201ENSMUST00000118528 577 ntBASIC0.64□□□□□ -2.31
Upf3bQ3ULL6 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.64□□□□□ -2.31
Upf3bQ3ULL6 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0.64□□□□□ -2.31
Upf3bQ3ULL6 Mir490-201ENSMUST00000093567 84 ntBASIC0.64□□□□□ -2.31
Upf3bQ3ULL6 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.64□□□□□ -2.31
Upf3bQ3ULL6 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Upf3bQ3ULL6 Gm20462-201ENSMUST00000172623 408 ntBASIC0.63□□□□□ -2.31
Upf3bQ3ULL6 Gm24323-201ENSMUST00000175342 77 ntBASIC0.63□□□□□ -2.31
Upf3bQ3ULL6 Gm25284-201ENSMUST00000180345 141 ntBASIC0.63□□□□□ -2.31
Upf3bQ3ULL6 Mir7j-201ENSMUST00000184427 122 ntBASIC0.63□□□□□ -2.31
Upf3bQ3ULL6 Gm29229-201ENSMUST00000188874 323 ntBASIC0.63□□□□□ -2.31
Upf3bQ3ULL6 Gm29490-201ENSMUST00000190923 342 ntBASIC0.63□□□□□ -2.31
Upf3bQ3ULL6 Gm28408-201ENSMUST00000191557 463 ntBASIC0.63□□□□□ -2.31
Upf3bQ3ULL6 Gm33654-201ENSMUST00000221704 215 ntBASIC0.63□□□□□ -2.31
Upf3bQ3ULL6 Gm25579-201ENSMUST00000083407 106 ntBASIC0.63□□□□□ -2.31
Upf3bQ3ULL6 Gm23013-201ENSMUST00000104146 106 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 Gm23130-201ENSMUST00000104252 74 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 Gm11386-201ENSMUST00000117761 347 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 Gm12433-201ENSMUST00000119659 255 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 Gm24747-201ENSMUST00000157835 87 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 Gm25434-201ENSMUST00000158278 167 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 Gm22435-201ENSMUST00000158552 128 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 Gm26180-201ENSMUST00000179942 107 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 Gm26164-201ENSMUST00000083793 104 ntBASIC0.62□□□□□ -2.31
Upf3bQ3ULL6 Gm22447-201ENSMUST00000158155 92 ntBASIC0.61□□□□□ -2.31
Upf3bQ3ULL6 Gm26236-201ENSMUST00000175536 137 ntBASIC0.61□□□□□ -2.31
Upf3bQ3ULL6 Gm20257-202ENSMUST00000188643 130 ntBASIC0.61□□□□□ -2.31
Upf3bQ3ULL6 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.61□□□□□ -2.31
Upf3bQ3ULL6 Gm28921-201ENSMUST00000190219 378 ntBASIC0.61□□□□□ -2.31
Upf3bQ3ULL6 Gm44921-201ENSMUST00000205290 301 ntBASIC0.61□□□□□ -2.31
Upf3bQ3ULL6 Gm45704-201ENSMUST00000212582 403 ntBASIC0.61□□□□□ -2.31
Upf3bQ3ULL6 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.61□□□□□ -2.31
Upf3bQ3ULL6 Gm22704-201ENSMUST00000083027 137 ntBASIC0.61□□□□□ -2.31
Upf3bQ3ULL6 Gm24523-201ENSMUST00000083965 132 ntBASIC0.61□□□□□ -2.31
Upf3bQ3ULL6 Mir362-201ENSMUST00000093592 65 ntBASIC0.61□□□□□ -2.31
Upf3bQ3ULL6 Gm15379-201ENSMUST00000121224 648 ntBASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 Gm26393-201ENSMUST00000157625 129 ntBASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 Gm9227-201ENSMUST00000194733 566 ntBASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 Gm38060-201ENSMUST00000194822 464 ntBASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 Gm45119-201ENSMUST00000207612 199 ntBASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 Gm25697-201ENSMUST00000082902 98 ntBASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 Gm22743-201ENSMUST00000083445 133 ntBASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 Gm23347-201ENSMUST00000083823 82 ntBASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 Gm24163-201ENSMUST00000093660 132 ntBASIC0.6□□□□□ -2.31
Upf3bQ3ULL6 Gm15899-201ENSMUST00000128586 238 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Gm23996-201ENSMUST00000158062 131 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Gm23898-201ENSMUST00000158111 103 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Gm22945-201ENSMUST00000158557 157 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Gm23008-201ENSMUST00000158946 80 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Gm16404-201ENSMUST00000177739 468 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Gm7958-201ENSMUST00000178255 468 ntBASIC0.59□□□□□ -2.31
Upf3bQ3ULL6 Gm7950-201ENSMUST00000179633 468 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms