Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NcanP55066 Gm22193-201ENSMUST00000116868 76 ntBASIC1.89□□□□□ -2.11
NcanP55066 Gm23991-201ENSMUST00000117033 93 ntBASIC1.89□□□□□ -2.11
NcanP55066 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NcanP55066 Gm26426-201ENSMUST00000177866 123 ntBASIC1.89□□□□□ -2.11
NcanP55066 Gm26060-201ENSMUST00000180094 123 ntBASIC1.89□□□□□ -2.11
NcanP55066 Gm27607-201ENSMUST00000185162 122 ntBASIC1.89□□□□□ -2.11
NcanP55066 Gm29140-201ENSMUST00000190187 476 ntBASIC1.89□□□□□ -2.11
NcanP55066 Gm26265-202ENSMUST00000196326 133 ntBASIC1.89□□□□□ -2.11
NcanP55066 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.89□□□□□ -2.11
NcanP55066 Gm18188-201ENSMUST00000219386 478 ntBASIC1.89□□□□□ -2.11
NcanP55066 Gm26175-201ENSMUST00000083794 131 ntBASIC1.89□□□□□ -2.11
NcanP55066 Gm10222-201ENSMUST00000088336 294 ntBASIC1.89□□□□□ -2.11
NcanP55066 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.88□□□□□ -2.11
NcanP55066 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NcanP55066 Gm25497-201ENSMUST00000104425 132 ntBASIC1.88□□□□□ -2.11
NcanP55066 Gm22494-201ENSMUST00000104495 128 ntBASIC1.88□□□□□ -2.11
NcanP55066 Gm24837-201ENSMUST00000158683 81 ntBASIC1.88□□□□□ -2.11
NcanP55066 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.88□□□□□ -2.11
NcanP55066 Gm37763-201ENSMUST00000193445 120 ntBASIC1.88□□□□□ -2.11
NcanP55066 Gm38060-201ENSMUST00000194822 464 ntBASIC1.88□□□□□ -2.11
NcanP55066 Mir3535-201ENSMUST00000197651 147 ntBASIC1.88□□□□□ -2.11
NcanP55066 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.88□□□□□ -2.11
NcanP55066 Gm45365-201ENSMUST00000209489 256 ntBASIC1.88□□□□□ -2.11
NcanP55066 Gm26497-201ENSMUST00000083146 107 ntBASIC1.88□□□□□ -2.11
NcanP55066 Gm22294-201ENSMUST00000083308 104 ntBASIC1.88□□□□□ -2.11
NcanP55066 Gm23336-201ENSMUST00000117023 123 ntBASIC1.87□□□□□ -2.11
NcanP55066 Gm15215-201ENSMUST00000117773 489 ntBASIC1.87□□□□□ -2.11
NcanP55066 Gm12417-201ENSMUST00000119153 403 ntBASIC1.87□□□□□ -2.11
NcanP55066 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.87□□□□□ -2.11
NcanP55066 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.87□□□□□ -2.11
NcanP55066 Gm23858-201ENSMUST00000158384 106 ntBASIC1.87□□□□□ -2.11
NcanP55066 Gm24818-201ENSMUST00000175093 161 ntBASIC1.87□□□□□ -2.11
NcanP55066 Gm27878-201ENSMUST00000184000 106 ntBASIC1.87□□□□□ -2.11
NcanP55066 Mir376a-201ENSMUST00000197584 68 ntBASIC1.87□□□□□ -2.11
NcanP55066 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.87□□□□□ -2.11
NcanP55066 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.87□□□□□ -2.11
NcanP55066 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.87□□□□□ -2.11
NcanP55066 Gm25930-201ENSMUST00000082785 107 ntBASIC1.87□□□□□ -2.11
NcanP55066 Gm24977-201ENSMUST00000083106 163 ntBASIC1.87□□□□□ -2.11
NcanP55066 Mir320-201ENSMUST00000083594 82 ntBASIC1.87□□□□□ -2.11
NcanP55066 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
NcanP55066 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
NcanP55066 Gm25943-201ENSMUST00000103791 90 ntBASIC1.86□□□□□ -2.11
NcanP55066 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.86□□□□□ -2.11
NcanP55066 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.86□□□□□ -2.11
NcanP55066 Gm24116-201ENSMUST00000103975 107 ntBASIC1.86□□□□□ -2.11
NcanP55066 Gm23013-201ENSMUST00000104146 106 ntBASIC1.86□□□□□ -2.11
NcanP55066 Mir467g-201ENSMUST00000116906 120 ntBASIC1.86□□□□□ -2.11
NcanP55066 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.86□□□□□ -2.11
NcanP55066 Gm22665-201ENSMUST00000158720 275 ntBASIC1.86□□□□□ -2.11
NcanP55066 Gm25247-201ENSMUST00000175475 90 ntBASIC1.86□□□□□ -2.11
NcanP55066 Gm23141-201ENSMUST00000178682 94 ntBASIC1.86□□□□□ -2.11
NcanP55066 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.86□□□□□ -2.11
NcanP55066 Gm25285-201ENSMUST00000178951 90 ntBASIC1.86□□□□□ -2.11
NcanP55066 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.86□□□□□ -2.11
NcanP55066 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.86□□□□□ -2.11
NcanP55066 Gm27402-201ENSMUST00000183890 120 ntBASIC1.86□□□□□ -2.11
NcanP55066 Gm43993-201ENSMUST00000203972 247 ntBASIC1.86□□□□□ -2.11
NcanP55066 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.86□□□□□ -2.11
NcanP55066 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC1.86□□□□□ -2.11
NcanP55066 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NcanP55066 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.86□□□□□ -2.11
NcanP55066 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.85□□□□□ -2.11
NcanP55066 Gm23535-201ENSMUST00000157542 106 ntBASIC1.85□□□□□ -2.11
NcanP55066 Gm23813-201ENSMUST00000175153 77 ntBASIC1.85□□□□□ -2.11
NcanP55066 Gm42672-201ENSMUST00000197821 352 ntBASIC1.85□□□□□ -2.11
NcanP55066 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.85□□□□□ -2.11
NcanP55066 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
NcanP55066 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NcanP55066 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
NcanP55066 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.84□□□□□ -2.11
NcanP55066 Gm11786-201ENSMUST00000120799 155 ntBASIC1.84□□□□□ -2.11
NcanP55066 Gm23983-201ENSMUST00000157142 114 ntBASIC1.84□□□□□ -2.11
NcanP55066 Gm22221-201ENSMUST00000157362 103 ntBASIC1.84□□□□□ -2.11
NcanP55066 Mir1936-201ENSMUST00000158699 93 ntBASIC1.84□□□□□ -2.11
NcanP55066 Gm25368-201ENSMUST00000158847 131 ntBASIC1.84□□□□□ -2.11
NcanP55066 Gm20144-201ENSMUST00000203031 165 ntBASIC1.84□□□□□ -2.11
NcanP55066 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.84□□□□□ -2.11
NcanP55066 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.84□□□□□ -2.11
NcanP55066 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.84□□□□□ -2.11
NcanP55066 Gm24625-201ENSMUST00000082622 130 ntBASIC1.84□□□□□ -2.11
NcanP55066 Gm22972-201ENSMUST00000083297 131 ntBASIC1.84□□□□□ -2.11
NcanP55066 Mir196b-201ENSMUST00000083509 85 ntBASIC1.84□□□□□ -2.11
NcanP55066 Gm11248-201ENSMUST00000119568 201 ntBASIC1.83□□□□□ -2.12
NcanP55066 Gm22984-201ENSMUST00000122751 122 ntBASIC1.83□□□□□ -2.12
NcanP55066 Gm26157-201ENSMUST00000158974 126 ntBASIC1.83□□□□□ -2.12
NcanP55066 Gm27540-201ENSMUST00000184950 187 ntBASIC1.83□□□□□ -2.12
NcanP55066 Gm28849-201ENSMUST00000188127 174 ntBASIC1.83□□□□□ -2.12
NcanP55066 Gm28330-201ENSMUST00000190353 171 ntBASIC1.83□□□□□ -2.12
NcanP55066 Gm42834-201ENSMUST00000196845 256 ntBASIC1.83□□□□□ -2.12
NcanP55066 Gm25789-201ENSMUST00000083294 76 ntBASIC1.83□□□□□ -2.12
NcanP55066 Gm24163-201ENSMUST00000093660 132 ntBASIC1.83□□□□□ -2.12
NcanP55066 Gm26479-201ENSMUST00000122620 106 ntBASIC1.82□□□□□ -2.12
NcanP55066 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.82□□□□□ -2.12
NcanP55066 Gm22215-201ENSMUST00000157558 96 ntBASIC1.82□□□□□ -2.12
NcanP55066 Gm25491-201ENSMUST00000158733 308 ntBASIC1.82□□□□□ -2.12
NcanP55066 Snora15-201ENSMUST00000177461 131 ntBASIC1.82□□□□□ -2.12
NcanP55066 Gm27793-201ENSMUST00000183405 76 ntBASIC1.82□□□□□ -2.12
NcanP55066 Gm3724-201ENSMUST00000197957 349 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 173.1 ms