Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Gm25450-201ENSMUST00000179144 107 ntBASIC1.52□□□□□ -2.17
NefmP08553 Mir6380-201ENSMUST00000184334 81 ntBASIC1.52□□□□□ -2.17
NefmP08553 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.52□□□□□ -2.17
NefmP08553 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.52□□□□□ -2.17
NefmP08553 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.52□□□□□ -2.17
NefmP08553 Gm25078-201ENSMUST00000082530 107 ntBASIC1.52□□□□□ -2.17
NefmP08553 Gm22294-201ENSMUST00000083308 104 ntBASIC1.52□□□□□ -2.17
NefmP08553 Mir22-201ENSMUST00000083595 95 ntBASIC1.52□□□□□ -2.17
NefmP08553 Gm25937-201ENSMUST00000083912 107 ntBASIC1.52□□□□□ -2.17
NefmP08553 Mir343-201ENSMUST00000102360 75 ntBASIC1.51□□□□□ -2.17
NefmP08553 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NefmP08553 Gm24116-201ENSMUST00000103975 107 ntBASIC1.51□□□□□ -2.17
NefmP08553 Gm22279-201ENSMUST00000157200 93 ntBASIC1.51□□□□□ -2.17
NefmP08553 Gm26004-201ENSMUST00000158804 116 ntBASIC1.51□□□□□ -2.17
NefmP08553 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NefmP08553 Gm20118-201ENSMUST00000187207 162 ntBASIC1.51□□□□□ -2.17
NefmP08553 Gm42719-201ENSMUST00000197393 355 ntBASIC1.51□□□□□ -2.17
NefmP08553 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.51□□□□□ -2.17
NefmP08553 Gm43911-201ENSMUST00000203097 76 ntBASIC1.51□□□□□ -2.17
NefmP08553 Gm43976-201ENSMUST00000203637 235 ntBASIC1.51□□□□□ -2.17
NefmP08553 Gm44687-201ENSMUST00000204975 235 ntBASIC1.51□□□□□ -2.17
NefmP08553 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.51□□□□□ -2.17
NefmP08553 Gm24164-201ENSMUST00000093663 104 ntBASIC1.51□□□□□ -2.17
NefmP08553 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
NefmP08553 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NefmP08553 Gm14307-201ENSMUST00000118930 291 ntBASIC1.5□□□□□ -2.17
NefmP08553 Gm24630-201ENSMUST00000122768 106 ntBASIC1.5□□□□□ -2.17
NefmP08553 Gm14297-201ENSMUST00000129110 291 ntBASIC1.5□□□□□ -2.17
NefmP08553 Gm16362-201ENSMUST00000135189 214 ntBASIC1.5□□□□□ -2.17
NefmP08553 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.5□□□□□ -2.17
NefmP08553 Gm24777-201ENSMUST00000157644 107 ntBASIC1.5□□□□□ -2.17
NefmP08553 Gm23474-201ENSMUST00000158884 75 ntBASIC1.5□□□□□ -2.17
NefmP08553 Mir5104-201ENSMUST00000175319 94 ntBASIC1.5□□□□□ -2.17
NefmP08553 Mir8119-201ENSMUST00000183371 129 ntBASIC1.5□□□□□ -2.17
NefmP08553 Gm9251-201ENSMUST00000197202 628 ntBASIC1.5□□□□□ -2.17
NefmP08553 Mir6962-201ENSMUST00000199512 63 ntBASIC1.5□□□□□ -2.17
NefmP08553 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.5□□□□□ -2.17
NefmP08553 Snord42a-201ENSMUST00000082606 65 ntBASIC1.5□□□□□ -2.17
NefmP08553 Gm24252-201ENSMUST00000083700 132 ntBASIC1.5□□□□□ -2.17
NefmP08553 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
NefmP08553 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.49□□□□□ -2.17
NefmP08553 Gm22598-201ENSMUST00000157600 127 ntBASIC1.49□□□□□ -2.17
NefmP08553 Gm23083-201ENSMUST00000157851 116 ntBASIC1.49□□□□□ -2.17
NefmP08553 Gm22085-201ENSMUST00000158344 110 ntBASIC1.49□□□□□ -2.17
NefmP08553 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
NefmP08553 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.49□□□□□ -2.17
NefmP08553 Gm7958-201ENSMUST00000178255 468 ntBASIC1.49□□□□□ -2.17
NefmP08553 Gm25671-201ENSMUST00000178612 105 ntBASIC1.49□□□□□ -2.17
NefmP08553 Gm23307-201ENSMUST00000179167 105 ntBASIC1.49□□□□□ -2.17
NefmP08553 Gm7950-201ENSMUST00000179633 468 ntBASIC1.49□□□□□ -2.17
NefmP08553 Gm25286-201ENSMUST00000179790 105 ntBASIC1.49□□□□□ -2.17
NefmP08553 Gm26914-201ENSMUST00000182262 223 ntBASIC1.49□□□□□ -2.17
NefmP08553 Gm37338-201ENSMUST00000191986 127 ntBASIC1.49□□□□□ -2.17
NefmP08553 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.49□□□□□ -2.17
NefmP08553 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.49□□□□□ -2.17
NefmP08553 Gm22780-201ENSMUST00000104084 132 ntBASIC1.48□□□□□ -2.17
NefmP08553 Gm11572-201ENSMUST00000119164 120 ntBASIC1.48□□□□□ -2.17
NefmP08553 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.48□□□□□ -2.17
NefmP08553 Gm28211-201ENSMUST00000190920 315 ntBASIC1.48□□□□□ -2.17
NefmP08553 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.48□□□□□ -2.17
NefmP08553 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.48□□□□□ -2.17
NefmP08553 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.48□□□□□ -2.17
NefmP08553 Gm26107-201ENSMUST00000083972 107 ntBASIC1.48□□□□□ -2.17
NefmP08553 Gm24431-201ENSMUST00000104073 66 ntBASIC1.47□□□□□ -2.17
NefmP08553 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.47□□□□□ -2.17
NefmP08553 Gm14298-201ENSMUST00000139032 237 ntBASIC1.47□□□□□ -2.17
NefmP08553 Gm16356-201ENSMUST00000143300 169 ntBASIC1.47□□□□□ -2.17
NefmP08553 Gm2962-201ENSMUST00000159266 336 ntBASIC1.47□□□□□ -2.17
NefmP08553 Gm22403-201ENSMUST00000174919 84 ntBASIC1.47□□□□□ -2.17
NefmP08553 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.47□□□□□ -2.17
NefmP08553 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.47□□□□□ -2.17
NefmP08553 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.47□□□□□ -2.17
NefmP08553 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.47□□□□□ -2.17
NefmP08553 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.47□□□□□ -2.17
NefmP08553 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.47□□□□□ -2.17
NefmP08553 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.47□□□□□ -2.17
NefmP08553 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.47□□□□□ -2.17
NefmP08553 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
NefmP08553 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.47□□□□□ -2.17
NefmP08553 Gm24283-201ENSMUST00000104233 107 ntBASIC1.46□□□□□ -2.18
NefmP08553 Gm14846-201ENSMUST00000121868 216 ntBASIC1.46□□□□□ -2.18
NefmP08553 Gm11834-201ENSMUST00000122257 585 ntBASIC1.46□□□□□ -2.18
NefmP08553 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.46□□□□□ -2.18
NefmP08553 Gm23779-201ENSMUST00000157938 64 ntBASIC1.46□□□□□ -2.18
NefmP08553 Gm23759-201ENSMUST00000158351 268 ntBASIC1.46□□□□□ -2.18
NefmP08553 Gm23714-201ENSMUST00000179259 105 ntBASIC1.46□□□□□ -2.18
NefmP08553 Gm27420-201ENSMUST00000183823 79 ntBASIC1.46□□□□□ -2.18
NefmP08553 Gm19777-201ENSMUST00000191940 358 ntBASIC1.46□□□□□ -2.18
NefmP08553 Gm37801-201ENSMUST00000194754 274 ntBASIC1.46□□□□□ -2.18
NefmP08553 Gm38109-201ENSMUST00000195386 181 ntBASIC1.46□□□□□ -2.18
NefmP08553 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.46□□□□□ -2.18
NefmP08553 Gm11792-201ENSMUST00000120640 168 ntBASIC1.45□□□□□ -2.18
NefmP08553 Gm22425-201ENSMUST00000158532 138 ntBASIC1.45□□□□□ -2.18
NefmP08553 Gm22114-201ENSMUST00000177756 107 ntBASIC1.45□□□□□ -2.18
NefmP08553 Gm23186-201ENSMUST00000180078 107 ntBASIC1.45□□□□□ -2.18
NefmP08553 Mir6905-201ENSMUST00000184228 70 ntBASIC1.45□□□□□ -2.18
NefmP08553 Gm36946-201ENSMUST00000192706 435 ntBASIC1.45□□□□□ -2.18
NefmP08553 Gm43602-201ENSMUST00000196772 300 ntBASIC1.45□□□□□ -2.18
NefmP08553 Gm22477-201ENSMUST00000122569 316 ntBASIC1.44□□□□□ -2.18
NefmP08553 Gm24221-201ENSMUST00000158833 313 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 637.6 ms